CaUC03G054120 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G054120
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Centromere protein S-like
Location	Ciama_Chr03: 4685305 .. 4687158 (-)
RNA-Seq Expression	CaUC03G054120
Synteny	CaUC03G054120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTCGTTTAAGACCATCCCGTCGGGAGTGGCATTTCTGGAGGGAAATAAAGGCGGATGGAAACAGTGAGAGTGCAGCAAAATTCCGTAAATTAACTCCAGAAGCCTCTGCAATGGAAACTGGGATGGAAGAAGACGACTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGGTTAATTCTCTTCATCTTCGAGCCTCTCTTGTTTTACATGTAATATAAGCTGAATGCTAGACGAGTTTTTCATATTTTTGTTTGACTTACTCTATTTTTTTTCTTCCAACTGTTTGGTTTGTTCTGCAGCGAAGAGGAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAGTTACTTTACTTTTCTTTTCTGCCTGTTTTGAGTCTGCAATGTTATTTTGAGCACTCTGTTTCTACATGACTACACCTTATATAACAGCATAATATATTGATCACTGAAGTTGCTAATCCCACCATTCGGAACACTTTCATTCTTCATTATTTTAGATAACCTAATTGCTAATTCTTTTAATTTTACATTTCTATATAATTTAGCATGCGTTCGGTTTGTTGGGACGCCTCTCTGTGCTGTGTTGTTAAATTGTGTGACCTAGTTGGAAGGAAACTGCATAACTTTGGTAAAGTTTAAGACAGAAAAGAGTTTCCAGAAGAACAAATGATGGAGAGACTATTGTGATAACTTAAAGAATGTCTTTGCACGATACTTTTGGATTCTAATCAGATGTTCTTATAGTTCATATAAATGTTTCTTTCGGAATGAGGGACAGAAGATGTCCCTCATTCTACCTTGAGACTTACACCTTACAGTGATCATGTTGGGTGTAAAGCCTTAACTCTCGTTGTATTCTTGTGGGAGCATATGCCTTAGGTAGAACCAAAAATGGCGCTAATCTTGAGACTTAGATTTTGTGCTTCGCCTTAAGGAATACGATAGGAAGAATAGTCCTCGTTGTATTCTGTTTCTTTGTTTAGATTTCAATCACTTAAAGAAGACATATAGTTATTATTTTAATTTATATCAATATATTAGCTTCAAGTTTGTTTTCTGTTACCGATGAATATTCTGTTCATTATCTAAAAGAAGCAAATATATACTTATACTTACTTATATCATATGCATGAAATTAGTGTATTCCTTCATCATAGGCATGAATGATTTGGTAGGTTTACAAAATTTCAACCAGACCTTGAGTTCATATCTTGGTATAGGGTCACACTTACGTTTGTAGTCACAGGGCTAACATATGAACCGCCAATGGTGTGTATAATACATGCAAGGAAAACAATTTTTTGTCAATTACTCTGCTGCAGTAGTTCTAGTTGCTAACCAGCAAGGAAAGAAGATAATTCTGTCATAGTTGTGTTTACTTTGTTTTTATGATTCTCTAAGTGTTGCAATGAGATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCGGGTTAGATGGTCTGATTCCCAAGTTGTTGTTGTTACTGTCTAGTTATATTTAGTCCATATGCAACAGACTTGAAGTAATACATAATTGCCTGAACCTCTTTGCTTCTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAA

mRNA sequence

GATTCGTTTAAGACCATCCCGTCGGGAGTGGCATTTCTGGAGGGAAATAAAGGCGGATGGAAACAGTGAGAGTGCAGCAAAATTCCGTAAATTAACTCCAGAAGCCTCTGCAATGGAAACTGGGATGGAAGAAGACGACTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAAGAGGAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCGGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAA

Coding sequence (CDS)

ATGGAAACTGGGATGGAAGAAGACGACTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAAGAGGAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCGGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAA

Protein sequence

METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITCVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKKAQKKEDRDRGAVHITDA

Homology

[Close]

BLAST of CaUC03G054120 vs. NCBI nr
Match: XP_011652290.1 (protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 121/138 (87.68%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           METGMEEDDSASELLRDRFRLS+ISIAEAEA +SGMEISEPVMTCVADLAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              EQLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLKTKEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 130

[Close]

BLAST of CaUC03G054120 vs. NCBI nr
Match: XP_038894698.1 (protein MHF1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 3.2e-55
Identity = 122/138 (88.41%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           M+TG+EED SASELLRDRFRLSTISIAEAEA RSGMEISEPVMTCVADLAFKYT      
Sbjct: 1   MKTGIEEDGSASELLRDRFRLSTISIAEAEANRSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              EQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHL+AILTSICNDLKTKEPQSERKRK
Sbjct: 61  --TEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLSAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KKEDRDRGAVHI DA
Sbjct: 121 KAPKKEDRDRGAVHIIDA 130

[Close]

BLAST of CaUC03G054120 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 7.1e-55
Identity = 120/138 (86.96%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           METGMEEDDSASELLRDRFRLS+ISIAEAEA +SGMEISEPVMTCVADLAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              +QLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLKTKEPQSERKRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 129

[Close]

BLAST of CaUC03G054120 vs. NCBI nr
Match: XP_038894699.1 (protein MHF1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 121/138 (87.68%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           M+TG+EED SASELLRDRFRLSTISIAEAEA RSGMEISEPVMTCVADLAFKYT      
Sbjct: 1   MKTGIEEDGSASELLRDRFRLSTISIAEAEANRSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              +QLAKDLELFVQHAGRKSVNTEDVILSAHRNEHL+AILTSICNDLKTKEPQSERKRK
Sbjct: 61  ---KQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLSAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KKEDRDRGAVHI DA
Sbjct: 121 KAPKKEDRDRGAVHIIDA 129

[Close]

BLAST of CaUC03G054120 vs. NCBI nr
Match: XP_008440142.1 (PREDICTED: centromere protein S isoform X1 [Cucumis melo] >KAA0055356.1 centromere protein S isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           MET MEEDDSASELLRDRFRLSTISIAEAEA +SGMEISEPVMTCVADLAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              EQLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLK KEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 130

[Close]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 7   EDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITCVAEQL 66
           E+ S  +L+RDRFRLS ISIAEAEAK++GMEI  PV+ CVADLAFKY         AE +
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY---------AENV 175

Query: 67  AKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKK-AQKK 126
           AKDLELF  HAGRK VN +DV+LSAHRN++LAA L S+CN+LK KEPQSERKRKK + KK
Sbjct: 176 AKDLELFAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 235

Query: 127 EDR--DRGAVHIT 137
           ED+     AV IT
Sbjct: 236 EDKASSSNAVRIT 239

[Close]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 26  IAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITCVAEQLAKDLELFVQHAGRKSVNTE 85
           + E  A    M+ S+  +  ++++ F            E  AKDLE+F +HA R ++NTE
Sbjct: 30  LCEEVASDKDMQFSKQTIAAISEVTFGQ---------CENFAKDLEMFARHAKRSTINTE 89

Query: 86  DVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKKAQKKEDRDRGAVHITDA 139
           DV L A R+  L   +T    D+   +   E+K KK +K ED +R +V   +A
Sbjct: 90  DVKLLARRSHSLLKYITEKNEDI--AQLNLEKKAKKKKKLEDENRNSVESAEA 131

[Close]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05
Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 2   ETGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITC 61
           ET  ++  S  + L+     +   + E  A    M+ S+  +  +++L F+         
Sbjct: 6   ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQ-------- 65

Query: 62  VAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKK 121
             E  AKDLE+F +HA R ++NTEDV L A R+  L   +T    ++   +   ERK +K
Sbjct: 66  -CENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEI--AQINLERKAQK 125

Query: 122 AQKKEDRDRGA 133
            +K ED  + +
Sbjct: 126 KKKSEDGSKNS 125

[Close]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot
Match: O74807 (Inner kinetochore subunit mhf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mhf1 PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05
Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 17  DRFRLSTISIAEAEAKRSGMEISE-PVMTCVADLAFKYTNNGMITCVAEQLAKDLELFVQ 76
           +RF+     + +    R+  E++E      + D  F      M+      LAKD+E F +
Sbjct: 5   ERFKAEIFHVTQEVCNRTASELTESESRNVIVDELFCVGVTEMVWEQIRVLAKDIEAFAE 64

Query: 77  HAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKK 122
           HAGRK+V  +DV+L   RNE L  I+    N+   +  +S++K+K+
Sbjct: 65  HAGRKTVQPQDVLLCCRRNEGLYEII----NNFHKESIKSKKKKKE 106

[Close]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot
Match: Q6NRI8 (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05
Identity = 31/121 (25.62%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           M  G EE  S ++ L+        S+ +  A    ++ S+  +  ++++ F+        
Sbjct: 1   MAEGQEEHFSRTQRLKAAVHYVVGSLCQEVADDKEIDFSKQAIAAISEITFRQ------- 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              E  AKDLE+F +HA R ++N +DV L A R+  L A ++   +++     + + K+K
Sbjct: 61  --CESFAKDLEIFARHAKRTTINMDDVKLLARRSRSLYAHISKCSDEIAANSLEQKEKKK 112

Query: 121 K 122
           K
Sbjct: 121 K 112

[Close]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.4e-55
Identity = 120/138 (86.96%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           METGMEEDDSASELLRDRFRLS+ISIAEAEA +SGMEISEPVMTCVADLAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              +QLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLKTKEPQSERKRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 129

[Close]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL
Match: A0A5A7UM53 (Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002010 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54
Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           MET MEEDDSASELLRDRFRLSTISIAEAEA +SGMEISEPVMTCVADLAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              EQLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLK KEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 130

[Close]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL
Match: A0A1S3B159 (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54
Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           MET MEEDDSASELLRDRFRLSTISIAEAEA +SGMEISEPVMTCVADLAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              EQLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLK KEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 130

[Close]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           MET MEEDDSASELLRDRFRLSTISIAEAEA +SGMEISEPVMTCVADLAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              +QLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLK KEPQSERKRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 129

[Close]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL
Match: A0A1S3B173 (centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMIT 60
           MET MEEDDSASELLRDRFRLSTISIAEAEA +SGMEISEPVMTCVADLAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRK 120
              +QLAKDLELF QHAGRKSVNTEDVIL+AHRNEHLAAILTSICNDLK KEPQSERKRK
Sbjct: 61  ---KQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAQKKEDRDRGAVHITDA 139
           KA KK+DRDRGAVHI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 129

[Close]

BLAST of CaUC03G054120 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 9.2e-37
Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 7   EDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITCVAEQL 66
           E+ S  +L+RDRFRLS ISIAEAEAK++GMEI  PV+ CVADLAFKY         AE +
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY---------AENV 175

Query: 67  AKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKK-AQKK 126
           AKDLELF  HAGRK VN +DV+LSAHRN++LAA L S+CN+LK KEPQSERKRKK + KK
Sbjct: 176 AKDLELFAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 235

Query: 127 EDR--DRGAVHIT 137
           ED+     AV IT
Sbjct: 236 EDKASSSNAVRIT 239

The following BLAST results are available for this feature:

BLAST of CaUC03G054120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652290.1	1.9e-55	87.68	protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 h...	[more]
XP_038894698.1	3.2e-55	88.41	protein MHF1 homolog isoform X1 [Benincasa hispida]	[more]
XP_004154006.1	7.1e-55	86.96	protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 h...	[more]
XP_038894699.1	1.2e-54	87.68	protein MHF1 homolog isoform X2 [Benincasa hispida]	[more]
XP_008440142.1	1.7e-53	85.51	PREDICTED: centromere protein S isoform X1 [Cucumis melo] >KAA0055356.1 centrome...	[more]

BLAST of CaUC03G054120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI55	1.3e-35	64.66	Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1	[more]
Q2TBR7	1.3e-06	31.86	Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1	[more]
Q8N2Z9	4.1e-05	28.24	Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1	[more]
O74807	4.1e-05	30.19	Inner kinetochore subunit mhf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q6NRI8	4.1e-05	25.62	Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1	[more]

BLAST of CaUC03G054120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR97	3.4e-55	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1	[more]
A0A5A7UM53	8.4e-54	85.51	Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B159	8.4e-54	85.51	centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]
A0A5D3BHQ8	3.2e-53	84.78	Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B173	3.2e-53	84.78	centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]

BLAST of CaUC03G054120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50930.1	9.2e-37	64.66	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..125 e-value: 4.8E-27 score: 96.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 59..97
IPR029003	CENP-S/Mhf1	PFAM	PF15630	CENP-S	coord: 15..97 e-value: 5.7E-14 score: 52.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..138
None	No IPR available	PANTHER	PTHR22980	CORTISTATIN	coord: 5..129
None	No IPR available	PANTHER	PTHR22980:SF0	CENTROMERE PROTEIN S	coord: 5..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G054120.1	CaUC03G054120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007129	homologous chromosome pairing at meiosis
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0031297	replication fork processing
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0071821	FANCM-MHF complex
cellular_component	GO:0043240	Fanconi anaemia nuclear complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046982	protein heterodimerization activity