CaUC03G053950 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G053950
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	squamosa promoter-binding-like protein 13A
Location	Ciama_Chr03: 4453500 .. 4456260 (-)
RNA-Seq Expression	CaUC03G053950
Synteny	CaUC03G053950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTTTTCTTTTGCCTCCTTCACAATCTACTTTATTTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACTAGTTTGGGGAACAATCTCTTACCATTCATTCACTACTCTCTCTCTCCTTTTCATTTAATTTAATTTAATTTTCCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTTTTGGAACTTCTAAGTTCCAATCTTCTTGGAAGGCCAACATCCAACCCCTTTCAAAGTAAGCATTTTTTTGAGTTGGCTTGAAATTTTGAGTAAATGGGGTTGGTGTATGGATCTTGTAGCTTCAAGGGAAAGTAATTTTGAGTCTTCTTTTTTTTTTTTTTTTTTTTTTCCTTGTAGAAGAGCTTGAGAAAAATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGGTAAAACTTTGGGACTTGGATTTCTTCTTTTGGTCTTTTTTTCTCTTGCTAATCATGGTATGTCTCTGCTCTGTTCTCTGTCAACAACTTTTGAGCACAACCCATTATTTTATTCTTGAAGAAAAGCAACTCCATGGAACATTTTTATACTTACAAAGAAAATGCGCAGTTTTGATTTTCCTTTTTGGATGAAAATGGGAACTGTTGGGTGTTTTTATGTGAAGAAATTTGTCCTCTTTCAGCATGGTTAAAAGCTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAGTTTTCTGAGTTTCTACACAGAATAAAAAGTTGAGATAAGTAGACAATGAAAGTTCCAAAACTTGCAGAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTTTTTCTTTTTCTGGGTGTTTGTTTAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCAGAACTTTTTTTTTTTCCCTTGCTTTTAAGATAGAAATCGATAATTAAAAAATTTACGATAAATAATAATGATTAAGCACTTAAAATTATACGATTTTTATAATCACAGAGTTTGAGGGTCCAATTTTAGGATTTGTATAAATTTGAGGGCTCAACTTTTAGCATTAAAGTTTTTAGTGTATAATTGTATCTACCACTATAAACTACCTTACAATTTGTTTCAAAAGTCAATTTTTACCCATAAATTCTTGAAATTATATCAATTTTAACTTTTAATTTCATCAAACCTAACCTCAAACTTTAAAAAATGTTACCATTTTAATCTTTTTAGAAATGTTTTTCCGCCAAATACCGTAAAAAAAAAAAATTAAAGTGTAATTGATAAAATTTTAGATATATATAATATTTGTAAACTGATCAAAATTATTTTTTTTTTTTTTTTGCAGAATTTTAAATGGTAAGATTTTTACACCATTTTTTTTGGGTTAAAATTAGATAGAAAAGTAGCAAAATTTAAATTGAAGTAAAAATTGCAACACTCTCTAGTCTAGTTTGATTAAATTATTTCTCTAGGTTAATTGATTTTTTCTAATCTTAAAAAAAAAAAAACCCTAATTCTCTTTATATAGTATTAAATTTTCTATCGACAACATTAATATCGATTCATTCACATTTAAATAGATTCAACGTTGACATACAAAATGAATCAACATTCTGGATATATTATTAAAAAAAAAAAAAAGAAAAAAAAAATCATAAAACATATGTGTGTTCCGGTTGATTGAGACCTCAACAAGTTTATTGGTTGATTTAGAATGGAAAAATTTAAAAGCAATTCTTTCAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCCGGCGTCAGCGACGGCGCAACAGATCCCGCCGCCCACCACTACCGTAACCCGCAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAGAAGCATCCGACCAGAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAGCCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCCATCAAAACACTTTCGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGAAACTCATCACCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAGAAAACCAAATTATGATCGTTATCTTAATTTTGTTGATTTCATTTAATCAACCCCCGATTTGTAGACTCCTTTCC

mRNA sequence

GGACTTTTCTTTTGCCTCCTTCACAATCTACTTTATTTGGATTTAATGGAATCTATGTCAGTGAATGAACTGGAAAGAACAAACCAATCCACTTCTGCTGCACTAGTTTGGGGAACAATCTCTTACCATTCATTCACTACTCTCTCTCTCCTTTTCATTTAATTTAATTTAATTTTCCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTTTTGGAACTTCTAAGTTCCAATCTTCTTGGAAGGCCAACATCCAACCCCTTTCAAAAAGAGCTTGAGAAAAATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCCGGCGTCAGCGACGGCGCAACAGATCCCGCCGCCCACCACTACCGTAACCCGCAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAGAAGCATCCGACCAGAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAGCCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCCATCAAAACACTTTCGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGAAACTCATCACCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAGAAAACCAAATTATGATCGTTATCTTAATTTTGTTGATTTCATTTAATCAACCCCCGATTTGTAGACTCCTTTCC

Coding sequence (CDS)

ATGGCATCATCTACCTCAGGATCATCAAAGAGAGCCAGAGGAACTCATAATGGTAACACTCAACCAGTTTCTTGCCTTGTAGATGGCTGCAATTCAGATCTAAGCATCTGTAGAGATTACCATAGGCGCCATAAAGTTTGTGAGTTGCATTCAAAAACTCCTCAAGTCACAATTGGTGGTCTCAAGCAGAGATTTTGCCAGCAGTGTAGTAGAAGGTTTGGCTCTGGAATTAGATGTGCTTTTGAGTCTTTTCATGAGAAAAAAAAATTTACCCAATTTTGGTATCTTAAATTTGAAGGCATTGTTGAATTCCCATCTGCTCTGTTTTGCAATGCTCTGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGCAAACGACTTGATGGCCATAACCGGCGCCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGCCGCTCCTTTCTCCTACCATCAAGGTCCCCAGTTGTTGCCATTTACAAGCTCACAAGTTTTCCCATCGACCGCCGTGAGCAGCCACGGGTGGTCGTCCGGCGTCAGCGACGGCGCAACAGATCCCGCCGCCCACCACTACCGTAACCCGCAACTAAACTTCCTCGAAAAACAGAGCCTATTTGCAGAAGCATCCGACCAGAGCAACAACAACAACTACAAACCCTCGCAGCCATTAGGGTTCTTGCACGGCGGCGGCGGCGGCCGGAACAAGATGATTTACGACAGGTTCAGAATTGGGGTTAATGAATCAGATTGTGCTCTCTCTCTTCTGTCATCACCACCGACACAGATTCAGAGTGATCATCAGCCACAGCAACACCGTAACGCCGCCATTTCTCTGCTCCATCCATTAACCCATCAAAACACTTTCGAGAATTCTGATTCTTCTTCCATTCAGATTCCAAATGAAACTCATCACCATCATCATCATCCTCATGGGGCTCTTAATTTCCCCGGAATCTTTGGAATTTCCTCCGACAATCCTGGAAATCAATCCCCTTCTACTCTTCCTTTTCACTGGGAGTAG

Protein sequence

MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGWSSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTHQNTFENSDSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE

Homology

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BLAST of CaUC03G053950 vs. NCBI nr
Match: XP_011652208.1 (squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031736289.1 squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN64421.1 hypothetical protein Csa_014174 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 3.8e-142
Identity = 271/356 (76.12%), Postives = 280/356 (78.65%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGPQLLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPQLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSDGATDPAAHHYRNPQLNFLEK-QSLFAEASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG SD ATD   HH RNPQLNF+EK QSLF E SDQ+N+ NNYK S PLG +HGGGG 
Sbjct: 181 WSSGGSDNATDSGVHHNRNPQLNFVEKQQSLFVETSDQTNSINNYKASPPLGLMHGGGGS 240

Query: 241 -RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTHQNTFENS 300
            RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQPQQ RNA+ISLLHPLTHQN F+NS
Sbjct: 241 ERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQRNASISLLHPLTHQNAFDNS 300

Query: 301 ---DSSSIQIPNETHHHHH-----HPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
               SSS+QI N+THHHHH     HPHG LNF GIFGISSDNPGNQSPSTLPFHWE
Sbjct: 301 SDTSSSSVQISNDTHHHHHHHPHPHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 314

[Close]

BLAST of CaUC03G053950 vs. NCBI nr
Match: XP_038893774.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893776.1 squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 5.0e-142
Identity = 271/367 (73.84%), Postives = 277/367 (75.48%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTISG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTD LPRSA  FSYHQGPQLLPFTSSQVFPST VSSHGW
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDPLPRSAGSFSYHQGPQLLPFTSSQVFPSTTVSSHGW 180

Query: 181 SSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLHG------- 240
           SSGVSDGATDPA HH RNPQLNFLEKQSLF EASDQS+NNNYK SQPLGFLHG       
Sbjct: 181 SSGVSDGATDPAVHHNRNPQLNFLEKQSLFVEASDQSSNNNYKASQPLGFLHGGPTTCQP 240

Query: 241 -------------GGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAA 300
                        GG  RNKMIYDRF+IGV+ESDCALSLLSSP TQIQSDHQ QQ RN A
Sbjct: 241 LLRTINTLPDNGDGGSERNKMIYDRFKIGVSESDCALSLLSSPQTQIQSDHQLQQQRNVA 300

Query: 301 ISLLHPLTHQNTFENSDSSSIQIPNETHHHH---HHPHGALNFPGIFGISSDNPGNQSPS 345
           IS+LHPLTH NTF+ SDSSS QIPN+ HHHH     PH ALNF GIFGISSDN GNQSPS
Sbjct: 301 ISMLHPLTHPNTFDTSDSSSGQIPNDIHHHHPPPPPPHAALNFSGIFGISSDNSGNQSPS 325

[Close]

BLAST of CaUC03G053950 vs. NCBI nr
Match: XP_008439882.1 (PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >KAA0055341.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYJ99267.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 511.1 bits (1315), Expect = 7.2e-141
Identity = 275/364 (75.55%), Postives = 281/364 (77.20%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSDGATDPAAHHYRNPQLNFLEK-QSLFAEASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG SD ATDP  HH RNPQLNFLEK QS+F E SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 --RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TH 300
             RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  TH
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNET------HHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 345
           QN F+NS    SSS+QI N+T      HHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CaUC03G053950 vs. NCBI nr
Match: XP_023542691.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-106
Identity = 231/404 (57.18%), Postives = 247/404 (61.14%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 130 LKQRFCQQCSR------------------------------------------FHSLEEF 189

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+TS+QV+PST VSSHGW
Sbjct: 190 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTSAQVYPSTTVSSHGW 249

Query: 181 SSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLH-------- 240
           SS      T   A  +R+ QLNFLEKQSLF E SD S  NNYK +Q L F+H        
Sbjct: 250 SS------TGETAALHRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 309

Query: 241 ---------------GGGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQ-- 300
                          GGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQQ  
Sbjct: 310 HLLRSMNTLSENGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQP 369

Query: 301 -----------------------HRNAAISLLHPLTHQNTFENSDSSSIQIPNETHHHHH 345
                                   R+AA+SLL PL                 N  HHHHH
Sbjct: 370 QPQPQQAESGSSGHLDLSRIEQHQRSAAVSLLQPLN----------------NHHHHHHH 405

[Close]

BLAST of CaUC03G053950 vs. NCBI nr
Match: KAG6573138.1 (Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-106
Identity = 230/393 (58.52%), Postives = 249/393 (63.36%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 1   MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+TS+QV+PST VSSHGW
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTSAQVYPSTTVSSHGW 180

Query: 181 SSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLH-------- 240
           SS      T   A  +R+ QLNFLEKQSLF E SD S  NNYK +Q L F+H        
Sbjct: 181 SS------TGETAALHRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 240

Query: 241 --------------GGGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQ--- 300
                         GGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQQ   
Sbjct: 241 PLLRSMNTLSENGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQPQ 300

Query: 301 --------------------HRNAAISLLHPLTH----QNTFENSDSSSIQIPNETHHHH 345
                                R+AA+SLL PL H     N++ENSDS             
Sbjct: 301 PQQAESGSSGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSDSD------------ 328

[Close]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.2e-43
Identity = 127/348 (36.49%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSDGATDPAAHHYRNPQLNFL----EKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGR 243
            +   A       Y   Q   +     K  +    S  S N+    ++   FL      R
Sbjct: 260 SLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPIS-SSPNSTRSIAKQFPFLQEEESSR 319

Query: 244 NKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP--QQHRNAAISLLHPLTHQNTFENS 303
              + +R    +++SDCALSLLSS  + +    QP     + A  ++ +       FEN+
Sbjct: 320 TASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLSLSQEAVETVFY---GSGLFENA 359

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
            + S                         + S N   + P T PFHWE
Sbjct: 380 SAVSDG----------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.2e-43
Identity = 127/348 (36.49%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSDGATDPAAHHYRNPQLNFL----EKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGR 243
            +   A       Y   Q   +     K  +    S  S N+    ++   FL      R
Sbjct: 260 SLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPIS-SSPNSTRSIAKQFPFLQEEESSR 319

Query: 244 NKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP--QQHRNAAISLLHPLTHQNTFENS 303
              + +R    +++SDCALSLLSS  + +    QP     + A  ++ +       FEN+
Sbjct: 320 TASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLSLSQEAVETVFY---GSGLFENA 359

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
            + S                         + S N   + P T PFHWE
Sbjct: 380 SAVSDG----------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-33
Identity = 129/409 (31.54%), Postives = 165/409 (40.34%), Query Frame = 0


Query: 2   ASSTSGSSKRARG-THNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 61
           A+++S  +KR RG    G  Q  SC VDGC  DLS CRDYHRRHKVCE HSKTP V + G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 62  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 121
            + RFCQQCSR                                          FH L+EF
Sbjct: 154 REMRFCQQCSR------------------------------------------FHLLQEF 213

Query: 122 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSS----------QVF 181
           DE KRSCRKRLDGHNRRRRKPQ D +  SA+  +  QG +  PF +           +  
Sbjct: 214 DEAKRSCRKRLDGHNRRRRKPQPDPM-NSASYLASQQGARFSPFATPRPEASWTGMIKTE 273

Query: 182 PSTAVSSHGWSSGVSD------GATDPAAHHY---RNPQLNF--------LEKQSLFAEA 241
            S   + H    G+S       G+T      +   +  +++F        +      A A
Sbjct: 274 ESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVPMDQAAAAA 333

Query: 242 SDQSNNNNYKPSQPLGFLHGGGG-GRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSD-- 301
           +        K   P    HGGGG G  KM  D     V +SDCALSLLS+P      D  
Sbjct: 334 AASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPANSTAIDVG 393

Query: 302 -----HQPQQHRNAAISLLHPLTHQNTFENSDSSSIQIPNETHHHHHHPHGA-------- 345
                 QP +H    I +  PL     F     SS       HH       A        
Sbjct: 394 GGRVVVQPTEH----IPMAQPLISGLQFGGGGGSSAWFAARPHHQAATGAAATAVVVSTA 453

[Close]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.3e-31
Identity = 109/339 (32.15%), Postives = 139/339 (41.00%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           STS   +   G   G  Q  SC VDGC +DLS  RDYHRRHKVCE HSKTP V + G + 
Sbjct: 94  STSTLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREM 153

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH L EFDE 
Sbjct: 154 RFCQQCSR------------------------------------------FHLLGEFDEA 213

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGWSSG 183
           KRSCRKRLDGHNRRRRKPQ D +  S +  +  QG +   FT  +  PS       W  G
Sbjct: 214 KRSCRKRLDGHNRRRRKPQADSM-SSGSFMTSQQGTRFASFTPPRPEPS-------W-PG 273

Query: 184 VSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQ--PLGFLHGG-----GG 243
           +      P   H+ +P      +Q  F  +   +    + P +     FLH G     GG
Sbjct: 274 IIKSEETPYYSHHHHPHPVMTSRQPHFVGSPSSATTAAFSPKEGRRFPFLHEGDQISFGG 333

Query: 244 GRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTHQNTFENS 303
           G          I V    C  ++++ PP +  S ++                    F + 
Sbjct: 334 GGGAAAAATLEISV----CQTTVVAPPPPESSSSNK-------------------MFSSD 357

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQS 336
             ++      T HHHHH H  L+      + S +P N S
Sbjct: 394 GLTTATTTTTTAHHHHHHHQVLDSDCALSLLS-SPANSS 357

[Close]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29
Identity = 104/289 (35.99%), Postives = 128/289 (44.29%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQP---VSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 63
           + +G++KR R    G  Q     SC VDGC +DL  CRDYHRRHKVCE HSKTP V + G
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAG 139

Query: 64  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 123
            + RFCQQCSR                                          FH L EF
Sbjct: 140 REMRFCQQCSR------------------------------------------FHLLAEF 199

Query: 124 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQV----------- 183
           D  KRSCRKRLDGHNRRRRKPQ D +  SA+  +  QG +  PF   ++           
Sbjct: 200 DADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRFSPFAHPRLEASWPPGVMKT 259

Query: 184 ----------FPSTAVSSHGWSSGVSDGATDPAAHHYRNPQLNFLEKQSL-FAEASDQSN 243
                      P  + SS      V+ GA  P A+     +  FL++  + FA       
Sbjct: 260 EESPYHITHQIPLGSSSSSRQQHFVALGAATP-AYAKEGRRFPFLQEGEISFATGVVLEP 319

Query: 244 NNNYKPSQPL----GFLHGGGGGRNKMIYDRFRIGVNESDCALSLLSSP 264
                  QPL          G G +KM  D+    V +SDCALSLLS+P
Sbjct: 320 PAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAP 324

[Close]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL
Match: A0A0A0LWQ4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.9e-142
Identity = 271/356 (76.12%), Postives = 280/356 (78.65%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGPQLLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPQLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSDGATDPAAHHYRNPQLNFLEK-QSLFAEASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG SD ATD   HH RNPQLNF+EK QSLF E SDQ+N+ NNYK S PLG +HGGGG 
Sbjct: 181 WSSGGSDNATDSGVHHNRNPQLNFVEKQQSLFVETSDQTNSINNYKASPPLGLMHGGGGS 240

Query: 241 -RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQHRNAAISLLHPLTHQNTFENS 300
            RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQPQQ RNA+ISLLHPLTHQN F+NS
Sbjct: 241 ERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQRNASISLLHPLTHQNAFDNS 300

Query: 301 ---DSSSIQIPNETHHHHH-----HPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
               SSS+QI N+THHHHH     HPHG LNF GIFGISSDNPGNQSPSTLPFHWE
Sbjct: 301 SDTSSSSVQISNDTHHHHHHHPHPHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 314

[Close]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL
Match: A0A5A7UP61 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004790 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.5e-141
Identity = 275/364 (75.55%), Postives = 281/364 (77.20%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSDGATDPAAHHYRNPQLNFLEK-QSLFAEASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG SD ATDP  HH RNPQLNFLEK QS+F E SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 --RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TH 300
             RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  TH
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNET------HHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 345
           QN F+NS    SSS+QI N+T      HHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL
Match: A0A1S3AZD9 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103484534 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.5e-141
Identity = 275/364 (75.55%), Postives = 281/364 (77.20%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTI G
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 61  LKQRFCQQCSR------------------------------------------FHSLEEF 120

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA-PFSYHQGPQLLPFTSSQVFPSTAVSSHG 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAA PFSYHQGP LLPFTSSQVFPST VSSHG
Sbjct: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPLLPFTSSQVFPSTTVSSHG 180

Query: 181 WSSGVSDGATDPAAHHYRNPQLNFLEK-QSLFAEASDQSNN-NNYKPSQPLGFLHGGGGG 240
           WSSG SD ATDP  HH RNPQLNFLEK QS+F E SDQ+NN NNYK S PLG LHGGGGG
Sbjct: 181 WSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNINNYKASPPLGLLHGGGGG 240

Query: 241 --RNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP----QQHRNAAISLLHPL--TH 300
             RNKMIYDRFRIG+NESDCALSLLSSP TQIQSDHQP    QQ RNAAISLLHPL  TH
Sbjct: 241 SERNKMIYDRFRIGINESDCALSLLSSPQTQIQSDHQPQQQQQQQRNAAISLLHPLSTTH 300

Query: 301 QNTFENS---DSSSIQIPNET------HHHHHHPHGALNFPGIFGISSDNPGNQSPSTLP 345
           QN F+NS    SSS+QI N+T      HHHHHHPHG LNF GIFGISSDNPGNQSPSTLP
Sbjct: 301 QNAFDNSSDTSSSSVQISNDTHHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLP 322

[Close]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL
Match: A0A6J1GVH8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111457246 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.3e-106
Identity = 230/395 (58.23%), Postives = 249/395 (63.04%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 64  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 123

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 124 LKQRFCQQCSR------------------------------------------FHSLEEF 183

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LL +TS+QV+PST VSSHGW
Sbjct: 184 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLAYTSAQVYPSTTVSSHGW 243

Query: 181 SSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLH-------- 240
           SS      T   A  +R+ QLNFLEKQSLF E SD S  NNYK +Q L F+H        
Sbjct: 244 SS------TGETAALHRDQQLNFLEKQSLFVEQSDHS--NNYKTAQTLAFMHGGPTTTCQ 303

Query: 241 ----------------GGGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQQ- 300
                           GGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQQ 
Sbjct: 304 PLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQQQ 363

Query: 301 ----------------------HRNAAISLLHPLTH----QNTFENSDSSSIQIPNETHH 345
                                  R+AA+SLL PL H     N++ENSDS           
Sbjct: 364 PQPQQAESGSSGHLDLGRIEQHQRSAAVSLLQPLNHHHHSHNSYENSDSD---------- 393

[Close]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL
Match: A0A6J1JZ22 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111490133 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.4e-105
Identity = 229/390 (58.72%), Postives = 249/390 (63.85%), Query Frame = 0


Query: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGG 60
           MASSTSGSSKRARG +N  +QPVSCLVDGCNSDLS CRDYHRRHKVCELHSKTPQVTIGG
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LKQRFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEF 120
           LKQRFCQQCSR                                          FHSLEEF
Sbjct: 130 LKQRFCQQCSR------------------------------------------FHSLEEF 189

Query: 121 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFTSSQVFPSTAVSSHGW 180
           DEGKRSCRKRLDGHNRRRRKPQTDLLPRSA PFSYHQG  LLP+T +QV+PST VSSHGW
Sbjct: 190 DEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLLPYTRAQVYPSTTVSSHGW 249

Query: 181 SSGVSDGATDPAAHHYRNPQLNFLEKQSLFAEASDQSNNNNYKPSQPLGFLH-------- 240
           SS      T   A  +R+ QLNFLEKQSLF E S  S  NNYK +Q L F+H        
Sbjct: 250 SS------TGETAGLHRDQQLNFLEKQSLFVEQSHHS--NNYKTAQTLAFMHGGPTTTCQ 309

Query: 241 ----------------GGGGGRNKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQPQ-- 300
                           GGGG RNKMIYDRFRIGV+ESDCALSLLSSP  Q Q+DHQPQ  
Sbjct: 310 PLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSP--QAQTDHQPQPQ 369

Query: 301 ----------------QH-RNAAISLLHPLTH---QNTFENSDSSSIQIPNETHHHHHHP 345
                           QH R+AA+SLL PL+H    N++ENSDS              + 
Sbjct: 370 QAESGSSGHLDLSRIEQHQRSAAVSLLQPLSHHHSHNSYENSDSD-------------NH 394

[Close]

BLAST of CaUC03G053950 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 176.0 bits (445), Expect = 5.1e-44
Identity = 127/348 (36.49%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSDGATDPAAHHYRNPQLNFL----EKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGR 243
            +   A       Y   Q   +     K  +    S  S N+    ++   FL      R
Sbjct: 260 SLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPIS-SSPNSTRSIAKQFPFLQEEESSR 319

Query: 244 NKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP--QQHRNAAISLLHPLTHQNTFENS 303
              + +R    +++SDCALSLLSS  + +    QP     + A  ++ +       FEN+
Sbjct: 320 TASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLSLSQEAVETVFY---GSGLFENA 359

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
            + S                         + S N   + P T PFHWE
Sbjct: 380 SAVSDG----------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CaUC03G053950 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 176.0 bits (445), Expect = 5.1e-44
Identity = 127/348 (36.49%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSDGATDPAAHHYRNPQLNFL----EKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGR 243
            +   A       Y   Q   +     K  +    S  S N+    ++   FL      R
Sbjct: 260 SLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPIS-SSPNSTRSIAKQFPFLQEEESSR 319

Query: 244 NKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP--QQHRNAAISLLHPLTHQNTFENS 303
              + +R    +++SDCALSLLSS  + +    QP     + A  ++ +       FEN+
Sbjct: 320 TASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLSLSQEAVETVFY---GSGLFENA 359

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
            + S                         + S N   + P T PFHWE
Sbjct: 380 SAVSDG----------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CaUC03G053950 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 176.0 bits (445), Expect = 5.1e-44
Identity = 127/348 (36.49%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 4   STSGSSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQ 63
           S S SSKR RG   G  Q   CLVDGC+SD S CR+YH+RHKVC++HSKTP VTI G KQ
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEG 123
           RFCQQCSR                                          FH+LEEFDEG
Sbjct: 140 RFCQQCSR------------------------------------------FHALEEFDEG 199

Query: 124 KRSCRKRLDGHNRRRRKPQTDLLPRSAAPFSYHQGPQLLPFT-SSQVFPSTAVSSHGWSS 183
           KRSCRKRLDGHNRRRRKPQ + + R A  F+  QG +LL F+  S VFP+T+V +  W +
Sbjct: 200 KRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGN 259

Query: 184 GVSDGATDPAAHHYRNPQLNFL----EKQSLFAEASDQSNNNNYKPSQPLGFLHGGGGGR 243
            +   A       Y   Q   +     K  +    S  S N+    ++   FL      R
Sbjct: 260 SLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPIS-SSPNSTRSIAKQFPFLQEEESSR 319

Query: 244 NKMIYDRFRIGVNESDCALSLLSSPPTQIQSDHQP--QQHRNAAISLLHPLTHQNTFENS 303
              + +R    +++SDCALSLLSS  + +    QP     + A  ++ +       FEN+
Sbjct: 320 TASLCERMTSCIHDSDCALSLLSSSSSSVPHLLQPPLSLSQEAVETVFY---GSGLFENA 359

Query: 304 DSSSIQIPNETHHHHHHPHGALNFPGIFGISSDNPGNQSPSTLPFHWE 345
            + S                         + S N   + P T PFHWE
Sbjct: 380 SAVSDG----------------------SVISGNEAVRLPQTFPFHWE 359

[Close]

BLAST of CaUC03G053950 vs. TAIR 10
Match: AT1G76580.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 61/139 (43.88%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 8   SSKRARGTHNGNTQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQ 67
           S     G   G   P  C VD C  DLSI +DYHRRHKVCE+HSK  +  +G   QRFCQ
Sbjct: 66  SGSPGSGGGGGGNYP-KCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQ 125

Query: 68  QCSRRFGSGIRCAFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSC 127
           QCSR                                          FH L EFDEGKRSC
Sbjct: 126 QCSR------------------------------------------FHLLSEFDEGKRSC 161

Query: 128 RKRLDGHNRRRRKPQTDLL 147
           R+RLDGHNRRRRK Q D +
Sbjct: 186 RRRLDGHNRRRRKTQPDAI 161

[Close]

BLAST of CaUC03G053950 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-23
Identity = 55/127 (43.31%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 20  TQPVSCLVDGCNSDLSICRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRRFGSGIRC 79
           ++ + C VD C +DLS  +DYHRRHKVCE+HSK     +GG+ QRFCQQCSR        
Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSR-------- 181

Query: 80  AFESFHEKKKFTQFWYLKFEGIVEFPSALFCNALFHSLEEFDEGKRSCRKRLDGHNRRRR 139
                                             FH LEEFDEGKRSCR+RL GHN+RRR
Sbjct: 182 ----------------------------------FHVLEEFDEGKRSCRRRLAGHNKRRR 206

Query: 140 KPQTDLL 147
           K   D +
Sbjct: 242 KANPDTI 206

The following BLAST results are available for this feature:

BLAST of CaUC03G053950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652208.1	3.8e-142	76.12	squamosa promoter-binding-like protein 13A [Cucumis sativus] >XP_031736289.1 squ...	[more]
XP_038893774.1	5.0e-142	73.84	squamosa promoter-binding-like protein 13A [Benincasa hispida] >XP_038893775.1 s...	[more]
XP_008439882.1	7.2e-141	75.55	PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo] >KAA0055341...	[more]
XP_023542691.1	1.2e-106	57.18	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]	[more]
KAG6573138.1	1.5e-106	58.52	Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CaUC03G053950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	7.2e-43	36.49	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	7.2e-43	36.49	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q6YZE8	4.0e-33	31.54	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q0J0K1	6.3e-31	32.15	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	1.6e-29	35.99	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]

BLAST of CaUC03G053950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ4	1.9e-142	76.12	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051590 PE...	[more]
A0A5A7UP61	3.5e-141	75.55	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3AZD9	3.5e-141	75.55	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034845...	[more]
A0A6J1GVH8	1.3e-106	58.23	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JZ22	1.4e-105	58.72	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CaUC03G053950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	5.1e-44	36.49	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	5.1e-44	36.49	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	5.1e-44	36.49	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G76580.1	1.3e-23	43.88	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT3G60030.1	2.2e-23	43.31	squamosa promoter-binding protein-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 25..71 e-value: 1.1E-15 score: 57.7 coord: 113..140 e-value: 3.6E-8 score: 33.6
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 22..141 score: 22.811371
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 16..128 e-value: 9.1E-32 score: 111.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 105..146
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 23..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..150
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 113..344 coord: 1..73
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 1..73 coord: 113..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G053950.1	CaUC03G053950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding