CaUC03G051430 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G051430
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr03: 1592722 .. 1593147 (+)
RNA-Seq Expression	CaUC03G051430
Synteny	CaUC03G051430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGCCAATTTTTTCTTCCCTAACTATCTTTCCACCATCAATACAGCTGTCGCCGTCGCGGCTGTCATCGTTTGTAATTTCTCCATTCGTTGAGTATATAGCTGTGGTGTCCATGTTTCTCCTTTTTCTACTATGTTTCTACATTGCCACTTTGTGTAGCGAAAGAGCCACCAAATCTAACCGCAAAAACTTGGTAGAGACTTTGCAGATTGAAGCGCTGGATTTCAGTTATAGCAAACACGACGGCGGTGAAACAGAATGTGTGATTTGCCTTTGCGAAATTGAAGAAGGGGAGAAGTGTAGAAAAATGAGCACGTGTGATCATGTGTTTCATAGGGACTGCATTGACCAGTGGTTTACGGTGGACCGCCACTGTCCCCTCTGCCAGACTGCCGTTTGTGTGGTGGTTGTTGAAAAATAG

mRNA sequence

ATGGCATCGCCAATTTTTTCTTCCCTAACTATCTTTCCACCATCAATACAGCTGTCGCCGTCGCGGCTGTCATCGTTTGTAATTTCTCCATTCGTTGAGTATATAGCTGTGGTGTCCATGTTTCTCCTTTTTCTACTATGTTTCTACATTGCCACTTTGTGTAGCGAAAGAGCCACCAAATCTAACCGCAAAAACTTGGTAGAGACTTTGCAGATTGAAGCGCTGGATTTCAGTTATAGCAAACACGACGGCGGTGAAACAGAATGTGTGATTTGCCTTTGCGAAATTGAAGAAGGGGAGAAGTGTAGAAAAATGAGCACGTGTGATCATGTGTTTCATAGGGACTGCATTGACCAGTGGTTTACGGTGGACCGCCACTGTCCCCTCTGCCAGACTGCCGTTTGTGTGGTGGTTGTTGAAAAATAG

Coding sequence (CDS)

ATGGCATCGCCAATTTTTTCTTCCCTAACTATCTTTCCACCATCAATACAGCTGTCGCCGTCGCGGCTGTCATCGTTTGTAATTTCTCCATTCGTTGAGTATATAGCTGTGGTGTCCATGTTTCTCCTTTTTCTACTATGTTTCTACATTGCCACTTTGTGTAGCGAAAGAGCCACCAAATCTAACCGCAAAAACTTGGTAGAGACTTTGCAGATTGAAGCGCTGGATTTCAGTTATAGCAAACACGACGGCGGTGAAACAGAATGTGTGATTTGCCTTTGCGAAATTGAAGAAGGGGAGAAGTGTAGAAAAATGAGCACGTGTGATCATGTGTTTCATAGGGACTGCATTGACCAGTGGTTTACGGTGGACCGCCACTGTCCCCTCTGCCAGACTGCCGTTTGTGTGGTGGTTGTTGAAAAATAG

Protein sequence

MASPIFSSLTIFPPSIQLSPSRLSSFVISPFVEYIAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQIEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCVVVVEK

Homology

[Close]

BLAST of CaUC03G051430 vs. NCBI nr
Match: XP_011659858.1 (E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-32
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 18  LSPSRL----SSFVISPFVEYIAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQIE 77
           LSPS L    S  ++  F   +  +SM LL +L  +IA LC++R+ KS+R+ L E L IE
Sbjct: 3   LSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLDIE 62

Query: 78  ALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTA 137
           A  F Y++ +GGE EC ICLCEIEEGEKCRKM TC HVFH+DCID+WF V+ HCP+C+T+
Sbjct: 63  APIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS 122

Query: 138 VCVVVVEK 142
           VCVVV+++
Sbjct: 123 VCVVVIDR 130

[Close]

BLAST of CaUC03G051430 vs. NCBI nr
Match: XP_038895792.1 (E3 ubiquitin-protein ligase ATL41-like [Benincasa hispida])

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-32
Identity = 68/90 (75.56%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 52  TLCSERATKSNRKNLVETLQIEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHV 111
           TL  ER  KS+RK L+ETL+IE  DF Y K D GE ECVICL EIEEGEKCR+MS CDHV
Sbjct: 49  TLLFERTPKSDRKKLLETLKIEVPDFDYGKDDEGEKECVICLREIEEGEKCRRMSMCDHV 108

Query: 112 FHRDCIDQWFTVDRHCPLCQTAVCVVVVEK 142
           FHRDCID+WF VD HCPLC+TAVCVVVVEK
Sbjct: 109 FHRDCIDRWFMVDPHCPLCRTAVCVVVVEK 138

[Close]

BLAST of CaUC03G051430 vs. NCBI nr
Match: XP_038895796.1 (RING-H2 finger protein ATL40-like [Benincasa hispida])

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31
Identity = 76/146 (52.05%), Postives = 105/146 (71.92%), Query Frame = 0


Query: 1   MASPIFSSL-TIFPPSIQLSPS-------RLSSFVISPFVEYIAVVSMFLLFLLCFYIAT 60
           M  PIFS+  TIFP SI   PS         S   + P+ EY+A V + LLF++  Y+  
Sbjct: 1   MPLPIFSAFPTIFPASIPSIPSPSPPWSPSWSLLEVYPY-EYLAAVFILLLFIVYIYLVI 60

Query: 61  LCSERATKSNRKNLVETLQIEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVF 120
           + ++RA +S+++ L+ET++ EA  FSYS+ DGG+ ECVICLC+IE+ EKCR+M+TC+HVF
Sbjct: 61  IFNKRADRSDKEELLETVETEAPVFSYSE-DGGDKECVICLCQIEKEEKCRRMNTCNHVF 120

Query: 121 HRDCIDQWFTVDRHCPLCQTAVCVVV 139
           H+DCIDQWF V+ HCPLC+T +CVVV
Sbjct: 121 HKDCIDQWFMVEHHCPLCRTVICVVV 144

[Close]

BLAST of CaUC03G051430 vs. NCBI nr
Match: XP_011648512.2 (RING-H2 finger protein ATL79 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-30
Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 18  LSPSRL----SSFVISPFVEYIAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQIE 77
           LSPS L    S  ++  F   +  VSM LL +L  +IA LC++R+ KS+ +   E L IE
Sbjct: 3   LSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLDIE 62

Query: 78  ALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTA 137
           A  F YS  +G E ECVICLCEIEEGEKCRKM TC HVFH+DCID+WF V+ HCP+C+T+
Sbjct: 63  APIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTS 122

Query: 138 VCVVVVEK 142
           VC+VV+++
Sbjct: 123 VCMVVIDR 130

[Close]

BLAST of CaUC03G051430 vs. NCBI nr
Match: KAE8653244.1 (hypothetical protein Csa_019886, partial [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-30
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 16  IQLSPSRLSS----FVISPFVEYIAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQ 75
           + LSPS L S     ++  ++E + + SMFL  +L  +I+ LC +R+ KS+ +   E + 
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 76  IEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQ 135
           IEA  F Y   +GGE +C ICLCEIEEGEKCRKM TC HVFH+DCI +WF VD HCP+C+
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 136 TAVCVVVVEK 142
           T+VCVVVV++
Sbjct: 121 TSVCVVVVDR 130

[Close]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot
Match: Q9LUL6 (Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.3e-10
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 88  ECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCV 137
           ECV+CL E+ +G+K R + +CDH FH +CID W   +  CP+C+  VC+
Sbjct: 87  ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCL 135

[Close]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 63  RKNLVETLQIEALDFSYSKHDG---GETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQ 122
           ++ L  T+      F+    DG     TEC +CL  ++E +K R++  C H+FH DC+D 
Sbjct: 79  KRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDT 138

Query: 123 WFTVDRHCPLCQTAV 135
           W T    CP+C+T V
Sbjct: 139 WLTTCSTCPVCRTEV 153

[Close]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot
Match: Q9P7E1 (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 84  GGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRH-CPLCQT 133
           G +  C++CL   E  ++CR++  C+H FHR+CIDQW T  ++ CPLC+T
Sbjct: 520 GTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569

[Close]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 77  FSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAV 135
           +S   H+    EC +CL E EE ++ R +  C HVFH DCID WF     CPLC+  V
Sbjct: 101 YSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 85  GETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQ 132
           G  EC +CLCE E+ E  R M  C HVFH DC+D W +    CPLC+
Sbjct: 131 GGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR 177

[Close]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL
Match: A0A0A0K790 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 7   SSLTIFPPSIQLSPS---RLSSFVISP-FVEYIAVVSMFLLFLLCFYIATLCSERATKSN 66
           SS  I P  + LSPS    L S ++ P F+  +  V M LL +L  +I  LC +R+ KS+
Sbjct: 2   SSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSD 61

Query: 67  RKNLVETLQIEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFT 126
            + L E L IEA  F Y+  +G E EC ICLCEIEEGEKCRKM TC HVFH+DCID+WF 
Sbjct: 62  GEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFK 121

Query: 127 VDRHCPLCQTAVCVVVVE 141
           VD HCP+C+T+VCVVVV+
Sbjct: 122 VDGHCPICRTSVCVVVVD 139

[Close]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL
Match: A0A0A0LY10 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 16  IQLSPSRLSS----FVISPFVEYIAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQ 75
           + LSPS L S     ++  ++E + + SMFL  +L  +I+ LC +R+ KS+ +   E + 
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 76  IEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQ 135
           IEA  F Y   +GGE +C ICLCEIEEGEKCRKM TC HVFH+DCI +WF VD HCP+C+
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 136 TAVCVVVVEK 142
           T+VCVVVV++
Sbjct: 121 TSVCVVVVDR 130

[Close]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL
Match: A0A0A0LY13 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G521990 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 5.1e-30
Identity = 63/104 (60.58%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 37  VVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQIEALDFSYSKHDGGETECVICLCEI 96
           +VSMFL  +L F+I+ +CS+R  KS+ + L + + +EAL F Y+  +GGE E  ICLCEI
Sbjct: 1   MVSMFLPIVLLFFISIVCSKRFAKSDVEELPKNVDLEALVFHYNGDEGGEQEYAICLCEI 60

Query: 97  EEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCVVVVE 141
           EEGEKCRKM TC HVFH+DCID+WF VD HCP+C+T+VCVVVV+
Sbjct: 61  EEGEKCRKMKTCGHVFHKDCIDRWFKVDDHCPICRTSVCVVVVD 104

[Close]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL
Match: A0A5A7VRG5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00590 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-29
Identity = 75/139 (53.96%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 1   MASPI-FSSLTIFPPSIQLSPSRLSSFVISPFVEYIAVVSMFLLFLLCFYIATLCSERAT 60
           M+SPI   SL   PPS    P   SS V+   +E + ++SM LLF+L   IA LC  R  
Sbjct: 1   MSSPILLPSLLPLPPS--PLPPLHSSIVLPRSIEDLLMLSMVLLFVLLLVIAILCGRRFA 60

Query: 61  KSNRKNLVETLQIEALDFSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQ 120
           KS+ + L + L I+A  F Y      E EC ICLCEIEEGEKCRKM TC H FH+DCID+
Sbjct: 61  KSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDR 120

Query: 121 WFTVDRHCPLCQTAVCVVV 139
           WFTV+ HCPLC+T+VCVVV
Sbjct: 121 WFTVELHCPLCRTSVCVVV 137

[Close]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL
Match: A0A0A0LUU6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 62/107 (57.94%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 35  IAVVSMFLLFLLCFYIATLCSERATKSNRKNLVETLQIEALDFSYSKHDGGETECVICLC 94
           +  VSM LL +L  +IA LC++R+ K + +   + L IEA  F YS  +GGE ECVICLC
Sbjct: 3   LMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGGEQECVICLC 62

Query: 95  EIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCVVVVEK 142
           EIEEGEKCRKM TC HVFH+DCID+WF V+ HCP+C+T+VC+VV+++
Sbjct: 63  EIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDR 109

[Close]

BLAST of CaUC03G051430 vs. TAIR 10
Match: AT3G14320.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-11
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 88  ECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCV 137
           ECV+CL E+ +G+K R + +CDH FH +CID W   +  CP+C+  VC+
Sbjct: 87  ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCL 135

[Close]

BLAST of CaUC03G051430 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 63  RKNLVETLQIEALDFSYSKHDG---GETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQ 122
           ++ L  T+      F+    DG     TEC +CL  ++E +K R++  C H+FH DC+D 
Sbjct: 79  KRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDT 138

Query: 123 WFTVDRHCPLCQTAV 135
           W T    CP+C+T V
Sbjct: 139 WLTTCSTCPVCRTEV 153

[Close]

BLAST of CaUC03G051430 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 77  FSYSKHDGGETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAV 135
           +S   H+    EC +CL E EE ++ R +  C HVFH DCID WF     CPLC+  V
Sbjct: 101 YSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]

BLAST of CaUC03G051430 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 85  GETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQ 132
           G  EC +CLCE E+ E  R M  C HVFH DC+D W +    CPLC+
Sbjct: 131 GGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR 177

[Close]

BLAST of CaUC03G051430 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 85  GETECVICLCEIEEGEKCRKMSTCDHVFHRDCIDQWFTVDRHCPLCQTAVCV 137
           G  EC +C+CE E+ E  R M  C HVFH DC+  W +    CPLC+  +C+
Sbjct: 92  GGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCL 143

The following BLAST results are available for this feature:

BLAST of CaUC03G051430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659858.1	2.3e-32	55.47	E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]
XP_038895792.1	5.0e-32	75.56	E3 ubiquitin-protein ligase ATL41-like [Benincasa hispida]	[more]
XP_038895796.1	1.9e-31	52.05	RING-H2 finger protein ATL40-like [Benincasa hispida]	[more]
XP_011648512.2	2.8e-30	54.69	RING-H2 finger protein ATL79 [Cucumis sativus]	[more]
KAE8653244.1	4.7e-30	51.54	hypothetical protein Csa_019886, partial [Cucumis sativus]	[more]

BLAST of CaUC03G051430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUL6	7.3e-10	46.94	Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 P...	[more]
Q9SLC3	1.6e-09	36.00	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]
Q9P7E1	1.6e-09	46.00	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
Q9LZJ6	2.1e-09	44.83	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
O64763	2.8e-09	51.06	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]

BLAST of CaUC03G051430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K790	6.0e-31	54.35	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 P...	[more]
A0A0A0LY10	2.3e-30	51.54	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE...	[more]
A0A0A0LY13	5.1e-30	60.58	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G521990 PE...	[more]
A0A5A7VRG5	1.1e-29	53.96	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0LUU6	1.5e-29	57.94	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE...	[more]

BLAST of CaUC03G051430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14320.1	5.2e-11	46.94	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT2G42360.1	1.2e-10	36.00	RING/U-box superfamily protein	[more]
AT3G62690.1	1.5e-10	44.83	AtL5	[more]
AT2G35000.1	2.0e-10	51.06	RING/U-box superfamily protein	[more]
AT2G34990.1	2.6e-10	44.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 89..130 e-value: 6.2E-4 score: 29.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 88..131 e-value: 8.5E-12 score: 45.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 89..131 score: 11.95817
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..136 e-value: 2.3E-18 score: 67.2
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 25..137
None	No IPR available	PANTHER	PTHR46539:SF9	RING-H2 FINGER PROTEIN ATL56	coord: 25..137
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 82..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G051430.1	CaUC03G051430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016020	membrane