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CaUC03G051350 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGAGAATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGTTTTAGAGATTGATTTTGCTGACCAATAGTTTCCATTAAAAAAAACTACAATTTCCCATTTCAGATTGGAATCGGATTCATCAAAATTTTGGAAATTTAAAATGGAGAGAGATCTGCAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTCCCTCAATCTCATGCCGTTCTTGTTTCTCCAAAACCCTAGTAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGTTTTCTATAAACTTAGCAGCTTTCTTCTGAATTCTATACTTCACTTTAAGCCCCATGGAAATCCTAATAATTTTCTCTGTTTTGTGGGGCTTTCAAATTGAAGTCTTTATTGCTTCAAGCTCTTGCTTCTTCCGGTGTTGTGAATTTTAGTTTCTAACTAATGAAATCCGTGCTTTACCAATCAAGTTTAATGAATTGAGATAGCTTACCATTATCTAGCGTGTACCGTTATGAAGATTGAGTTTCCTGGTTTGCCAAATCTAATATTGAATGTCATTTGTCGGGATGAGCTTAGTTGTAATTGACATGTACTCCTTCTCTTAAAGTCAGCAATTTGATTACTGAATATCATTCTCTTGATAAATGGAAGTGGAAAGAAACCAAAGCGAGCATAGAACTGGCATGTAGTATGTGTTAGAGACTAAGAGGTTTTGCTATTGAATTTCATCCTCTATTGTACTTAAAAGATAATGGAAGGGGAAAGGAAAGCCATGGATGAGAAGGTTTATGATACTTGGTATCTGAAATGAATTAAGTGGAATTATTTTTGTTATTAAAGCTGTGCTTTGGCCTTTGGCTTGAATATTTTCTACAACACAGTTTTGTTCTGTTCACAATGCAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTGTAAGTTGCCATTTTTATACTTTTGTTACGCATTATGTGTTTAGAATCTCTCATCTCTTTTAGTGGGCACAGTGTTTCTGAATGAAGCTTTCCCCTACTATCACTTGTGAAAGCATACTAATAATTAAGTCACTCTAAGCACTGTGAAATGTTTTTAAGTGCTTTAAAACCAAACATTATGAAAATTTTGAAAATGTTTCTAAAAGTACTCCCGAACCACTTTTAATCTTCTGGAATTGGATTGGTGTATGAGTGGTTTTTTACTTCTACTTTCATTAGCAATTCACACGGATTTTCCTCATCTTGATCTTTTTCATTAAGTCAGTCAGTACTTTAAAATGGATCCTAGTCCAATCCATAAATGCATTGCTCCTTGCCTTCCTCTTAAGAGAGAAGATTCAACAAATTGTCTTGTAGTATTATCATTTGAATTAGCATATTTACATACTCATTATGCATGTTACTAAAATGTGTGATGAAATTCCATCATTCAGGTATTTGGGTTTAGACAACTCTGGACAATGGAGTCATTCCTCTATGCATTTTTTGAGTTCTCTATTAAACATTTGTTTTCTTGCACTTGGGAAAACTTTAGTTGATTTTGTGAATTTGGTCTCATTTTCAGATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTGTTTCTGGTAATCTAATGGCATCCTTTAACTCTCCCTCTCTGTCTTCTGTTAAATTATAATCTGCATCTTCCTCTTGTGACAATTGCAATTGCTGAGTCTTTTGTTAGTTCAAGTGCTTATTTTCCTTTCTTCTTTGCTGTTCAGCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAACGGAGTTTTTTCTGTCGATCTATGTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAGGTTGGAGTGTCAACCTTATTCATTGATCTTTTAAAGTAATGTAGTTATTTGTTATTTTCTTTTA GGCGAGAATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAACGGAGTTTTTTCTGTCGATCTATGTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAGGTTGGAGTGTCAACCTTATTCATTGATCTTTTAAAGTAATGTAGTTATTTGTTATTTTCTTTTA ATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAA MGILTRCRNNGRHVDIENKQRLAAAMRSKQQKVLQAVAFLIFPLHILYWVSPIFPKIFDFTVGMKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGPSFIVWDISDNGFVIVLEIIGGERLVAIVACFFISDCAVACCNLEVD Homology
BLAST of CaUC03G051350 vs. NCBI nr
Match: KAA0067751.1 (Rab5-interacting [Cucumis melo var. makuwa] >TYJ97393.1 Rab5-interacting [Cucumis melo var. makuwa]) HSP 1 Score: 246.9 bits (629), Expect = 1.7e-61 Identity = 123/158 (77.85%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_038895585.1 (respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 231.9 bits (590), Expect = 5.5e-57 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_022948613.1 (uncharacterized protein C20orf24 homolog [Cucurbita moschata] >XP_023523192.1 uncharacterized protein C20orf24 homolog [Cucurbita pepo subsp. pepo] >KAG6607251.1 Respirasome Complex Assembly Factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036935.1 hypothetical protein SDJN02_00555 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229.6 bits (584), Expect = 2.8e-56 Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_008457469.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]) HSP 1 Score: 229.6 bits (584), Expect = 2.8e-56 Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_022998338.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima]) HSP 1 Score: 228.4 bits (581), Expect = 6.1e-56 Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy Swiss-Prot
Match: Q9CQT9 (Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14 Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy Swiss-Prot
Match: Q9BUV8 (Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 41/114 (35.96%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A5A7VQ84 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002120 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 8.1e-62 Identity = 123/158 (77.85%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A6J1G9S8 (uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452238 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56 Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A1S3C692 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56 Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A6J1KGG2 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493006 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56 Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A0A0LY22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 5.6e-55 Identity = 107/113 (94.69%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CaUC03G051350 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46 Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 0
BLAST of CaUC03G051350 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein ) HSP 1 Score: 175.3 bits (443), Expect = 5.7e-44 Identity = 82/131 (62.60%), Postives = 101/131 (77.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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