CaUC03G051350 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G051350
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Rab5-interacting
Location	Ciama_Chr03: 1482460 .. 1484955 (+)
RNA-Seq Expression	CaUC03G051350
Synteny	CaUC03G051350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGAGAATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGTTTTAGAGATTGATTTTGCTGACCAATAGTTTCCATTAAAAAAAACTACAATTTCCCATTTCAGATTGGAATCGGATTCATCAAAATTTTGGAAATTTAAAATGGAGAGAGATCTGCAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTCCCTCAATCTCATGCCGTTCTTGTTTCTCCAAAACCCTAGTAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGTTTTCTATAAACTTAGCAGCTTTCTTCTGAATTCTATACTTCACTTTAAGCCCCATGGAAATCCTAATAATTTTCTCTGTTTTGTGGGGCTTTCAAATTGAAGTCTTTATTGCTTCAAGCTCTTGCTTCTTCCGGTGTTGTGAATTTTAGTTTCTAACTAATGAAATCCGTGCTTTACCAATCAAGTTTAATGAATTGAGATAGCTTACCATTATCTAGCGTGTACCGTTATGAAGATTGAGTTTCCTGGTTTGCCAAATCTAATATTGAATGTCATTTGTCGGGATGAGCTTAGTTGTAATTGACATGTACTCCTTCTCTTAAAGTCAGCAATTTGATTACTGAATATCATTCTCTTGATAAATGGAAGTGGAAAGAAACCAAAGCGAGCATAGAACTGGCATGTAGTATGTGTTAGAGACTAAGAGGTTTTGCTATTGAATTTCATCCTCTATTGTACTTAAAAGATAATGGAAGGGGAAAGGAAAGCCATGGATGAGAAGGTTTATGATACTTGGTATCTGAAATGAATTAAGTGGAATTATTTTTGTTATTAAAGCTGTGCTTTGGCCTTTGGCTTGAATATTTTCTACAACACAGTTTTGTTCTGTTCACAATGCAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTGTAAGTTGCCATTTTTATACTTTTGTTACGCATTATGTGTTTAGAATCTCTCATCTCTTTTAGTGGGCACAGTGTTTCTGAATGAAGCTTTCCCCTACTATCACTTGTGAAAGCATACTAATAATTAAGTCACTCTAAGCACTGTGAAATGTTTTTAAGTGCTTTAAAACCAAACATTATGAAAATTTTGAAAATGTTTCTAAAAGTACTCCCGAACCACTTTTAATCTTCTGGAATTGGATTGGTGTATGAGTGGTTTTTTACTTCTACTTTCATTAGCAATTCACACGGATTTTCCTCATCTTGATCTTTTTCATTAAGTCAGTCAGTACTTTAAAATGGATCCTAGTCCAATCCATAAATGCATTGCTCCTTGCCTTCCTCTTAAGAGAGAAGATTCAACAAATTGTCTTGTAGTATTATCATTTGAATTAGCATATTTACATACTCATTATGCATGTTACTAAAATGTGTGATGAAATTCCATCATTCAGGTATTTGGGTTTAGACAACTCTGGACAATGGAGTCATTCCTCTATGCATTTTTTGAGTTCTCTATTAAACATTTGTTTTCTTGCACTTGGGAAAACTTTAGTTGATTTTGTGAATTTGGTCTCATTTTCAGATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTGTTTCTGGTAATCTAATGGCATCCTTTAACTCTCCCTCTCTGTCTTCTGTTAAATTATAATCTGCATCTTCCTCTTGTGACAATTGCAATTGCTGAGTCTTTTGTTAGTTCAAGTGCTTATTTTCCTTTCTTCTTTGCTGTTCAGCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAACGGAGTTTTTTCTGTCGATCTATGTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAGGTTGGAGTGTCAACCTTATTCATTGATCTTTTAAAGTAATGTAGTTATTTGTTATTTTCTTTTA

mRNA sequence

GGCGAGAATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAACGGAGTTTTTTCTGTCGATCTATGTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAGGTTGGAGTGTCAACCTTATTCATTGATCTTTTAAAGTAATGTAGTTATTTGTTATTTTCTTTTA

Coding sequence (CDS)

ATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTCGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGAGAGAGGTTGGTCGCCATAGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAA

Protein sequence

MGILTRCRNNGRHVDIENKQRLAAAMRSKQQKVLQAVAFLIFPLHILYWVSPIFPKIFDFTVGMKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGPSFIVWDISDNGFVIVLEIIGGERLVAIVACFFISDCAVACCNLEVD

Homology

[Close]

BLAST of CaUC03G051350 vs. NCBI nr
Match: KAA0067751.1 (Rab5-interacting [Cucumis melo var. makuwa] >TYJ97393.1 Rab5-interacting [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-61
Identity = 123/158 (77.85%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGK++K+NSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGPSFI 183
           SIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TL    + +
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLGTLL 120

Query: 184 VWDISDNGFVIVLEIIGGERLVAIVACFFISDCAVACC 222
              +S         +   ERLVAIVAC FIS+CAV  C
Sbjct: 121 TMVLSTFSKSAKASV---ERLVAIVACSFISECAVPYC 155

[Close]

BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_038895585.1 (respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 5.5e-57
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKS K+NSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSTKVNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 113

[Close]

BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_022948613.1 (uncharacterized protein C20orf24 homolog [Cucurbita moschata] >XP_023523192.1 uncharacterized protein C20orf24 homolog [Cucurbita pepo subsp. pepo] >KAG6607251.1 Respirasome Complex Assembly Factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036935.1 hypothetical protein SDJN02_00555 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-56
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKSIK+NSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           S+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 113

[Close]

BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_008457469.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-56
Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGK++K+NSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           SIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TL
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTL 113

[Close]

BLAST of CaUC03G051350 vs. NCBI nr
Match: XP_022998338.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima])

HSP 1 Score: 228.4 bits (581), Expect = 6.1e-56
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKSIK+NSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           S+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 113

[Close]

BLAST of CaUC03G051350 vs. ExPASy Swiss-Prot
Match: Q9CQT9 (Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQAVALVCGLLW 123
           M  G+  +   Q Q  NG L     +K+   + +W DKD+  DV++W RQ +ALV G++W
Sbjct: 1   MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWDDKDEFLDVIYWFRQIIALVLGVIW 60

Query: 124 GSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGPSF 183
           G +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  L      
Sbjct: 61  GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALF----M 120

Query: 184 IVWDI 188
           ++W I
Sbjct: 121 VIWII 121

[Close]

BLAST of CaUC03G051350 vs. ExPASy Swiss-Prot
Match: Q9BUV8 (Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 41/114 (35.96%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQAVALVCGLLW 123
           M  G+  +   Q Q  NG L     +K+   + +W DKD+  DV++W RQ +A+V G++W
Sbjct: 1   MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIW 60

Query: 124 GSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           G +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  L
Sbjct: 61  GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFAL 114

[Close]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A5A7VQ84 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002120 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 8.1e-62
Identity = 123/158 (77.85%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGK++K+NSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGPSFI 183
           SIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TL    + +
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTLFLLGTLL 120

Query: 184 VWDISDNGFVIVLEIIGGERLVAIVACFFISDCAVACC 222
              +S         +   ERLVAIVAC FIS+CAV  C
Sbjct: 121 TMVLSTFSKSAKASV---ERLVAIVACSFISECAVPYC 155

[Close]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A6J1G9S8 (uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452238 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKSIK+NSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           S+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 113

[Close]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A1S3C692 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56
Identity = 106/113 (93.81%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGK++K+NSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           SIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFAS+TL
Sbjct: 61  SIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASVTL 113

[Close]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A6J1KGG2 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493006 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKSIK+NSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           S+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 113

[Close]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL
Match: A0A0A0LY22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 5.6e-55
Identity = 107/113 (94.69%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 64  MKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGLLWG 123
           MKDGKS+K+NSQLQ QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQ+VALVCGLLWG
Sbjct: 1   MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWG 60

Query: 124 SIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 177
           SIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHGVLLQEGLFASITL
Sbjct: 61  SIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITL 112

[Close]

BLAST of CaUC03G051350 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46
Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 64  MKDGKSIKLN---SQLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALVCGL 123
           MK+ KS KLN    Q  HQN HL P KLAKLFDP+ SWDKDQLGDVLHW+RQ V L+ GL
Sbjct: 1   MKESKSAKLNQLQQQENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGL 60

Query: 124 LWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLLCGP 183
           LWGSIPLVGGIW ILFL IS+ +VYGYYAMILKVDEE+FGGH  LLQEGLFAS+TL    
Sbjct: 61  LWGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLA 120

Query: 184 SFIVWDIS 189
             +V+ ++
Sbjct: 121 WILVYSLA 128

[Close]

BLAST of CaUC03G051350 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein )

HSP 1 Score: 175.3 bits (443), Expect = 5.7e-44
Identity = 82/131 (62.60%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 64  MKDGKSIKLNS------QLQHQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQAVALV 123
           MK+GKS K +S      Q+ HQN HL  F  AKLFD E SWDKDQLGDVLHW+RQ V L+
Sbjct: 1   MKEGKSSKSSSQQEQHEQIYHQNSHLGSFNFAKLFDSEASWDKDQLGDVLHWIRQVVGLL 60

Query: 124 CGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLL 183
           CGLLWG+IPLVGGIW +LFL IS+ +VYGYYA++LK+DEE+FGGH  LLQ+GLFAS++L 
Sbjct: 61  CGLLWGAIPLVGGIWLLLFLAISSGIVYGYYALVLKIDEEDFGGHAALLQDGLFASLSLF 120

Query: 184 CGPSFIVWDIS 189
                +V+ +S
Sbjct: 121 LLAWILVYSLS 131

The following BLAST results are available for this feature:

BLAST of CaUC03G051350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067751.1	1.7e-61	77.85	Rab5-interacting [Cucumis melo var. makuwa] >TYJ97393.1 Rab5-interacting [Cucumi...	[more]
XP_038895585.1	5.5e-57	97.35	respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]	[more]
XP_022948613.1	2.8e-56	95.58	uncharacterized protein C20orf24 homolog [Cucurbita moschata] >XP_023523192.1 un...	[more]
XP_008457469.1	2.8e-56	93.81	PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]	[more]
XP_022998338.1	6.1e-56	94.69	uncharacterized protein C20orf24 homolog [Cucurbita maxima]	[more]

BLAST of CaUC03G051350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQT9	3.5e-14	35.20	Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV...	[more]
Q9BUV8	1.0e-13	35.96	Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=...	[more]

BLAST of CaUC03G051350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ84	8.1e-62	77.85	Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002...	[more]
A0A6J1G9S8	1.3e-56	95.58	uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3C692	1.3e-56	93.81	uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150...	[more]
A0A6J1KGG2	3.0e-56	94.69	uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0LY22	5.6e-55	94.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1	[more]

BLAST of CaUC03G051350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59410.1	1.6e-46	69.53	Rab5-interacting family protein	[more]
AT2G29020.1	5.7e-44	62.60	Rab5-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029008	Rab5-interacting protein family	PFAM	PF07019	Rab5ip	coord: 106..175 e-value: 1.0E-8 score: 35.6
IPR010742	Rab5-interacting protein	PANTHER	PTHR12906	PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN	coord: 64..187
None	No IPR available	PANTHER	PTHR12906:SF2	BNAA04G16800D PROTEIN	coord: 64..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G051350.1	CaUC03G051350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
cellular_component	GO:0016021	integral component of membrane