CaUC03G051330 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G051330
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 1456644 .. 1457667 (-)
RNA-Seq ExpressionCaUC03G051330
SyntenyCaUC03G051330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGGTGGTTTTAGTCACCGGTTATAGCCGGTAAACTAAGAGGCACTTACCGATAGGTCCGGTGAAGGGGGTCAATGGTATAAGATAGCTGGGGTTTAAGCAGATGTGTTTTGGTGGTTTTTCAAAGGGTTTTGGCGATCGGAATTTTATTTTCTGTTTTTTTTTAAAAAGAAATTTACTGAGAGAACAATTTTTCTTTTCTTTTTTTTTTTTTTTCTTTTTTTTTCCTCTTTTTAAGAACTTGTTTTGGTTTGGCGTTTGGAATTTTGTTGGATTAAAGCGAAAAAAAGTATGGGATAGAAAACGAGAGAATGTGGTGAATCAATCAAAGCCAATCCTTGTTTCGTTCTCGGGTTTCTTCTGTAATTTTACAGATCTCTTTTTCGCTTGCAACTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATCGTTTTGTTCAGGTGAGTCATCACAATCATTTTTTGTCTTTCACTCATTTCTGTTTCCACAATTCTTTCTTTCGTCGTTTATAATGGATGTGGGAGGGCTTTTCAGAACAGTGCATTTGGATTTTAGACTAAAACCTTGGGATTAGGGACCGAAATTGGAAGATTTAACATCCAATTTCGTTTCAGTATTGTCGTTTGTTGACAATTTTCGGTTTCCGTTCCTTTTAATATCTGATGATGATCACACTCGAATGGGTTTTTGATTAGCGGAAGGATTCCTTTTCCCTTCTTCTCTTCTCCGTGTTTCTAGGTATTCAATTTGTGCTTTGTGAGGTTCGATCTCAGATTCTGCACCAATTATCTTTAGAATTTTGTGGGTGATCGAGAATTTTCCATTTTTCTGTTACGAGTTCTTGAATTTCGATCAAGTTTCAGCTGTTTGCTGGTTCCTACTTAGATGTAGCGAACCATCTATTTCTCATGGATTTATGTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGCGGTTTGGTATTAA

mRNA sequence

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCAACTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATCGTTTTGTTCAGATTCTGCACCAATTATCTTTAGAATTTTGTGGGTGATCGAGAATTTTCCATTTTTCTGTTACGAGTTCTTGAATTTCGATCAAGTTTCAGCTGTTTGCTGGTTCCTACTTAGATGTAGCGAACCATCTATTTCTCATGGATTTATGTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGCGGTTTGGTATTAA

Coding sequence (CDS)

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCAACTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATCGTTTTGTTCAGATTCTGCACCAATTATCTTTAGAATTTTGTGGGTGATCGAGAATTTTCCATTTTTCTGTTACGAGTTCTTGAATTTCGATCAAGTTTCAGCTGTTTGCTGGTTCCTACTTAGATGTAGCGAACCATCTATTTCTCATGGATTTATGTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGCGGTTTGGTATTAA

Protein sequence

MVGSSGRQEPVFRSLFRLQLVVFFAGISFSGDEDLKSFCSDSAPIIFRILWVIENFPFFCYEFLNFDQVSAVCWFLLRCSEPSISHGFMFLFVFDHLLKGFVAVWY
Homology
[Close]
BLAST of CaUC03G051330 vs. NCBI nr
Match: KGN65735.1 (hypothetical protein Csa_019789 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-09
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLQLVVFFAGISFSGDEDLK 37
          MVGSSGRQEPVFRSLFRL LVVFFAGISFSGDEDLK
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLK 36

[Close]
BLAST of CaUC03G051330 vs. ExPASy TrEMBL
Match: A0A0A0LUX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.5e-10
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLQLVVFFAGISFSGDEDLK 37
          MVGSSGRQEPVFRSLFRL LVVFFAGISFSGDEDLK
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLK 36

The following BLAST results are available for this feature:
BLAST of CaUC03G051330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65735.11.5e-0997.22hypothetical protein Csa_019789 [Cucumis sativus][more]
BLAST of CaUC03G051330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC03G051330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUX27.5e-1097.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1[more]
BLAST of CaUC03G051330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G051330.1CaUC03G051330.1mRNA