CaUC03G051020 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G051020
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 1134475 .. 1137740 (+)
RNA-Seq ExpressionCaUC03G051020
SyntenyCaUC03G051020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAGAACCGGTTCAAAGAATTGTTCGTTCAAAAGCATGTAGACAACCACAATCTCTTCTGGATAATCGCGGATGCGATGGATTGGCTTGAAAGAAAATGCCGGTATAACGTCTATTTAGTTTTCTCGTCTTGTTGTCGAATTCATGATTACGAATGCGTAGGACTAAATGCTTATCGATATGGCTGGCGATTTTGGAACCAAGTTTTCAAACAACCAATTGTAATTGTTTAAAATCTATTATATCTTTTCCATTTTCTCATTTGATCTTTTTTTGTTGGTCTTTTCTTGAGCAGTTGAAGGATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGGTTGAAGCCCGATATATTATCGATGGTAGAGGAAGTTCGACTGTTGAAGCGGACTTGTGTTATACACCAGCAACAATTCTACTGGGATGTAAGGTTCCCTGGAAATTAACATTAATATTTGTGTCTAGTAAGAAAAATAATTATCGTCAGGGCAAAAGTTTTCATTAGAGCATGACTTAAACTTGTTTTGGAATTCAATTAACATCAATTTATCGTCAAATTTGAATTCCTAGGCTACCCGTAAGGTTCTCTTACCAAAGTTTTTCGCTTATGTTGTTATTCGTAGCCTAAATTCGTTTGGATAATCGACTCTGAGTTAAGCAATAGATATGTCATGGGCTCTTAGTAGAAGAACAATTATAAAATTACCCTGAAAAGTGGAATCGTCCGATCATTGCCACAGGTTATATGTACTTATTGATTAGACGCATAAGATTGGAGTGTAGAATTTCAAATATGAAAGGACAACTCTTCATGTATACTGATATTGAGTCAGAAACTCATTGTTATCGATCCGGGCACTTTTGAGCTCAACGATAATGGGATTTTGTCTTCGATGGGTTTGGTTGGAATATGATTATGTCTTGGAAACATTCAAATCAGGATTTATTATCCTTGGTTTCCGTGGGACATTCTTTTAAAGGAGATGCAAAAGCGTTACGGCTAGCCTTTAAACGTTCATTCTTTTGGTCTTTATGTGGTGTGAAAGGAATGGAAGGATCTTTAGTTATACTCATTCGTCTTTTGAGAGCTTAATGAATTTACTTTTATTTAATGTGTTTTATTGGTGTAAATTTTCATATCATTTCAAAGGCCTTCTTTTCTATAACTAGAGAGCTCTTTCGTAATCCATCAAGGGTAGTTTGGAGTCTTTTCAAAGGCCTTCTTTTCCATCACAGGGGTCGCAGAGCTTTTTACTAGAGGGTAATGCTGAATTCCTTATAGCCTTTTTATTTGGAATAGGAAACAGTAGCGCTTTGTCTATTGTGTCTTCCTATTTTCTTTGCTATCTTTGTTGTTGATAAGGCATTGTTGAGTCTGTACAGTTGGAGATCCTTAATTGGAAAATAATTACGTTGGATGGTTCCATTCCACTTTCACAAACAATTTATTTGCAAAATGTGTTAACTATGATAGTGATACCATTGGAGTTGGTGGTATCCTTAGCCAATTTACATTCTCTGCAGGGGTGAAAGTTCGAGCAGCTGCTATATTACTTGTGTGATTTGTGCATGCACACCTTGCTGGAAAGACCAACCTGATACCACCTGTCTCATCCTTCACTTTGACAAGTGGAGGAAAGCTTGATGGTAATATTCTTTTTGTTTCTTACCAACCAAAGAGAGTCATGGATAGGATTCTTTGAACTTAGGACATCATTTTAACATTTAGCGTTTCCAATAAGCTTAGAGTGGTTAGGGTGGTTAACAGTTATTGGCCTACTCATGAGAAAACTTGGTATAATCTCTCTTCACTTCCGGAGTTTCTTGAGAAAAAGATATGGTGTTTGATAGTGCTAAAAAAAAAGGTGGAATGCGAAAGACATGGATGTAGGCGCTGCTGAAACACACAGGTATCTCATTTTCTTATTTGATCCTTTTGATTTGACTAGTTGTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTCTTCCCTTTAAGTTATTGGGTAGTAAATGTATTAGGATAATCCAATCAGATTGCCATAATGCCTCCGCAGTACCCATCTTAATGTGTTATTAAATTGAGAAAAAAAAAGTCAACAAAATTTTAAAACTAGTCTTGAAATAAGATTTAACACAAAGATTGGAGAAGACCGTTACCTAATGTGGGAAGTCAACTTCAGGTTCCTATAAGCCGATCAAGATCAATAAGACAATTACCTTTAAAGTATGAGCTAACAAGAAATTCCATTTGGGAAAGCAAACATAAGTATTCATTCCAAACTGAATATCAGTGCTAAATAATCTGACAAGATCACGATCAAAGGGTGATGGCAAAATAAATAGGATCACTCTCTAGTTATAAGTAAAGTTAATCGAAGATTCAAGATAAATGAATTACATGAATAATACAACCTTACTTGAACAAGATTTGTTCTATAGGTTGTACAACAAGAATAATAGCAATAAATAGGGTTTAAAAACAAAAGAAATATTTGAAGGGATAGCAAAGCAATCTCCAACGAACCTCTACTACAAAACTTATTGACCTACAAATGAAGACATGGTCTACTAAATGTAGCTTCCATTCATGTCAATTTAAAATCATTTGGTGGAAGGTTGATACCAAATAATCTCCAAAGTAATAGGTATTCAATTGTTCAATATTTATAATTGATGATAGAATCATTCAAACTCTATCCATTGCTTAGGTTTCTGATGCACTCTTTAGCTCTATCAGACTACTTCATCTTGCTGTGGTCTAATGGAGAACTTGCATGTTGTTTGCTATTTCTGGTGAGGGTGCAATGCACCATCATTGTAAAATTCTCCCCTATTTAGCCCGGTATTTATGTTTCTAATGAATATTAGTTAACTTGGACTTGTCAACTGATTATGAAACAATCCATTTATGGACCCTCTTATGCTCCACTCCCTGGATTTAGCCCAAGATCCATTTAATGGAACTTTTGTCAACCCTTTGCTTGGACATATTTGTCCCTTTGAGCTACTTGCTATGATGCACCTTTACAGGATAAGGTTTACAAATCTACTTTTCTTAACATTCTTTCGGTGGTATCTTCTTTATTTTAGGAACATAATATTGCTACTTTTGGCTTGATTCTTATTGGCACTCTTTCCAGCCTACTTTTCTCAAGCCGTCAGAGTGTGGCAATACTGCTTTACTGTGTGCCTTCTGTTCATCCCACTTTACAGCCAAATTTGATTCTGGCAACTTGCAATTTGTTTTCTTGTGAAAACTAA

mRNA sequence

ATGGACAAGAACCGGTTCAAAGAATTGTTCGTTCAAAAGCATGTAGACAACCACAATCTCTTCTGGATAATCGCGGATGCGATGGATTGGCTTGAAAGAAAATGCCGGTATAACGTCTATTTAGTTTTCTCGTCTTGTTGTCGAATTCATGATTACGAATGCGTAGGACTAAATGCTTATCGATATGGCTGGCGATTTTGGAACCAAGTTTTCAAACAACCAATTTTGAAGGATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGGTTGAAGCCCGATATATTATCGATGGTAGAGGAAGTTCGACTGTTGAAGCGGACTTGTGTTATACACCAGCAACAATTCTACTGGGATCTCTATCAGACTACTTCATCTTGCTGTGGTCTAATGGAGAACTTGCATGTTGTTTGCTATTTCTGGAACATAATATTGCTACTTTTGGCTTGATTCTTATTGGCACTCTTTCCAGCCTACTTTTCTCAAGCCGTCAGAGTGTGGCAATACTGCTTTACTGTGTGCCTTCTGTTCATCCCACTTTACAGCCAAATTTGATTCTGGCAACTTGCAATTTGTTTTCTTGTGAAAACTAA

Coding sequence (CDS)

ATGGACAAGAACCGGTTCAAAGAATTGTTCGTTCAAAAGCATGTAGACAACCACAATCTCTTCTGGATAATCGCGGATGCGATGGATTGGCTTGAAAGAAAATGCCGGTATAACGTCTATTTAGTTTTCTCGTCTTGTTGTCGAATTCATGATTACGAATGCGTAGGACTAAATGCTTATCGATATGGCTGGCGATTTTGGAACCAAGTTTTCAAACAACCAATTTTGAAGGATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGGTTGAAGCCCGATATATTATCGATGGTAGAGGAAGTTCGACTGTTGAAGCGGACTTGTGTTATACACCAGCAACAATTCTACTGGGATCTCTATCAGACTACTTCATCTTGCTGTGGTCTAATGGAGAACTTGCATGTTGTTTGCTATTTCTGGAACATAATATTGCTACTTTTGGCTTGATTCTTATTGGCACTCTTTCCAGCCTACTTTTCTCAAGCCGTCAGAGTGTGGCAATACTGCTTTACTGTGTGCCTTCTGTTCATCCCACTTTACAGCCAAATTTGATTCTGGCAACTTGCAATTTGTTTTCTTGTGAAAACTAA

Protein sequence

MDKNRFKELFVQKHVDNHNLFWIIADAMDWLERKCRYNVYLVFSSCCRIHDYECVGLNAYRYGWRFWNQVFKQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPATILLGSLSDYFILLWSNGELACCLLFLEHNIATFGLILIGTLSSLLFSSRQSVAILLYCVPSVHPTLQPNLILATCNLFSCEN
Homology
[Close]
BLAST of CaUC03G051020 vs. NCBI nr
Match: XP_022964853.1 (uncharacterized protein LOC111464834 [Cucurbita moschata])

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-07
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 72  KQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPATI 117
           K P+  +HVRKFVPSVIMK EARY++DGRGSST EADL Y+ A+I
Sbjct: 40  KMPL--NHVRKFVPSVIMKFEARYVLDGRGSSTAEADLYYSSASI 82

[Close]
BLAST of CaUC03G051020 vs. NCBI nr
Match: KAG6606193.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-06
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 72  KQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPATI 117
           K P+  +H RKFVPSVIMK EARY++DGRGSST EADL Y+ A+I
Sbjct: 40  KMPL--NHARKFVPSVIMKFEARYVLDGRGSSTAEADLYYSSASI 82

[Close]
BLAST of CaUC03G051020 vs. NCBI nr
Match: KAG6583393.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-06
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 72  KQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPATI 117
           K P+  +H RKFVPSVIMK EARY++DGRGSST EADL Y+ A+I
Sbjct: 40  KMPL--NHARKFVPSVIMKFEARYVLDGRGSSTAEADLYYSSASI 82

[Close]
BLAST of CaUC03G051020 vs. NCBI nr
Match: KAG7019160.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 62.0 bits (149), Expect = 6.6e-06
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 72  KQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPA 115
           K P+  +HVRKFVPSVIMK EARY++DGRGSST EADL   P+
Sbjct: 40  KMPL--NHVRKFVPSVIMKFEARYVLDGRGSSTAEADLNSLPS 80

[Close]
BLAST of CaUC03G051020 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 72  KQPILKDHVRKFVPSVIMKVEARYIIDGRGSSTVEADLCYTPATI 117
           K P+  +HVRKFVPSVIMK EARY++DGRGSST EADL Y+ A+I
Sbjct: 40  KMPL--NHVRKFVPSVIMKFEARYVLDGRGSSTAEADLYYSSASI 82

The following BLAST results are available for this feature:
BLAST of CaUC03G051020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964853.13.5e-0771.11uncharacterized protein LOC111464834 [Cucurbita moschata][more]
KAG6606193.11.0e-0668.89Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6583393.11.0e-0668.89Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7019160.16.6e-0669.77Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CaUC03G051020 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC03G051020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HM491.7e-0771.11uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC1114648... [more]
BLAST of CaUC03G051020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G051020.1CaUC03G051020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding