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CaUC03G050750 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGGAAGAGCTTTTGTGAAATTCGCGGGAAAGGGAAGAAGCAAACCCTAAAGGTGGGATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTTCACAACGGTTTTCTCTTCATCCTCTGCAATTTGATCTTCTCACTTTTCAATTTCAATCAATGAATTCATCGTTGTACGAGTTTTTTGATCTCTGTGCTCGCTTGCACGTGGTTTTTCAGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGGTATCTTTCGCATTTTTATACATTTTATTTTGGAATTTTGATCTATTGCTTTGTTTATGATTGTACCAATTGCTTTCAATCATTCATTTTCAGCACGAGCTTACTTGCCCTGTGAAGACGGATTCTTCTTTCTGGACACTAGGTGATTGTAAATTCTCTCTTCAATGACTAAAATGGAATTTTGGGTGTAATGTTTTTACACCAAATAAACTTCATGGGACTGAATTCAGCTGGATGCTTCAGAAAAACATAATTATTAAATCAGCCAGATTGTTGGTGTCTCTTTTGTGATGTACCTATTTTGTTTATTTTGTATGGCAGAGGATGACATAATGCATATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCTATACAGGGTCAAGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGGTCAGCTTTTTTTATACTCTATATGTTTGTGTATTTTAGATGATATGCTCATGTTTTTGTGCTTTCCATTTTTCTGTTGATTTATGTACTCTTTGTTTCTTTTCTTGAGCATTTTTATCATTCTTATTCAGAGATCAATAGTTTCAAGTTATCCAAATCGACTTTCATCCTATGAGGCTAGGATCATGGGGGATTCATTATTTGAGTTCTATTGAGTAAATAGTTATTGAGATGTTATGATAACTGCTTGATGTTGTATCTGGAATGAGACTAATGTGCCTTGTCATAAATATGAGACAGTGAGAAAGCTAACGTGTCTGGAAAATCACGACATTAATCCACGTTGTTACAGTTCCCCATGAGAAAAACATGGAAGGATTCCTATAAAATGTTAACAAGTTGATGTCTTTACAATCTAAACTTTTGGTGGACTGTTTGGTAGCTGCAGTGACAACTGTTTGAAAGCACCACCCCCCCGTGTATGAGATGCCCCATCCTCCTCCTCTCGTTTCTTCTCTAGACTCAAACATGAGATCTACAACTTTATCTTAACCAATGTTTAGGTAGATGAAAACATATCTTCCAAATTTTGCAATCGATAAGAGAGGGCTTTGGCCAAACACCATGGGGGACTTGTAGAGAATTGGTTCAATCCATGGTGGTCACCTACCTAAGATTCAATATTTTATGATCACCTTGGCAACCAAACACTCATGGATTCATTATAAAAAAAAGAAAGAAGAAGAAAAAAAAAAACCATAGAGAGGTCCTGGTCTATTTCTTCTCATTGGAGGCATTTCTTAAAAAGTTAATTAGGTGCACTGCACCCAACAAGTGGTAGAAAAAACCCCAACTCAATAGGCCAACTCTTTGTTCAAGTGATGTCCCTACAGTACCACCTCTCCTTTAGAAAAAAATCTTCCTTCAAGACAGTCCCATGATAACTTGAACTTGTGATGAGCTCTTGTACCAACTAACGTAGGATGGTTGAGCCAATGTTTCAAAAGTGGCAGTTGATACGAGAGAGCTCTGTTATTCATATTTCATATAATGTCACGAAAGGTAGTTCATTAGTTATGGATGGGGGTGTTGTAGGATTCTTGTTAGTTATTGAATTTTGATTGGGTGCTGTTATGTCTTTGTTTTTTATATCCCCAAGTGGCAGTGTTGTTATGCCTTTGTTTGTCTTGCTATTTAAAAGTAATGACATTTTAGAAATATACAATCATGTTCCTTTTCCTACCAAATTTCAGAAGTCCTGAGTCAAGTTTCAGTTATGTAATAAAATCTTGAAATTTAATCTGCACAAATTATTTCTTTGCAGAACCCTGGATTTGACTTCTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTTAGGTTGACAAATATGGTGTGGCATTTATAACTTGCATGGTTGTGACATTCAGTAAATAATGTAGATTTTCTACTGGTCTTGATTTATTCAAATCCCTGTAATGACCACGATTGTGAGAAGAATATGTACCGAGTCTGTGCAATCGCTGTAATGAAGTGAAAATATATAGGTGATATAAATTTAACTACCAACATTTTGTATTTTAACCTTCTATTTGGTTTGATATAAACAAGAGTTCCACATTTGATAGCAGGTGTCAGATCATCATTCTCTATATATTTGTCTACCCAAATCTCATTCCCAGTAAAATAGAGAGAGAATGGACCTCTTTAAGTTTAAGTTCTCCTTGGCCAACCAAATTAATGTTCCCAAATATGATGTGATCCTGTTTAGGTTTCTAGTTCATGTGTAACAGCTCATGTTGAATGCCCAAAGTGGGTGGATGAAAACATTTGGCTGATGGGGCCTATCTTGTTGGCGTTGGCTGCCATTTCCTGA AAAAAGGAAGAGCTTTTGTGAAATTCGCGGGAAAGGGAAGAAGCAAACCCTAAAGGTGGGATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTTCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTTGCCCTGTGAAGACGGATTCTTCTTTCTGGACACTAGAGGATGACATAATGCATATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCTATACAGGGTCAAGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTCTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTTAGCTCATGTTGAATGCCCAAAGTGGGTGGATGAAAACATTTGGCTGATGGGGCCTATCTTGTTGGCGTTGGCTGCCATTTCCTGA ATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTTCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTTGCCCTGTGAAGACGGATTCTTCTTTCTGGACACTAGAGGATGACATAATGCATATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCTATACAGGGTCAAGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTCTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTTAGCTCATGTTGAATGCCCAAAGTGGGTGGATGAAAACATTTGGCTGATGGGGCCTATCTTGTTGGCGTTGGCTGCCATTTCCTGA MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLAHVECPKWVDENIWLMGPILLALAAIS Homology
BLAST of CaUC03G050750 vs. NCBI nr
Match: XP_038894388.1 (nudC domain-containing protein 2 [Benincasa hispida]) HSP 1 Score: 334.7 bits (857), Expect = 4.9e-88 Identity = 154/157 (98.09%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. NCBI nr
Match: XP_008457374.1 (PREDICTED: nudC domain-containing protein 2 [Cucumis melo] >KAA0031818.1 nudC domain-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 334.3 bits (856), Expect = 6.5e-88 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. NCBI nr
Match: XP_004151457.1 (nudC domain-containing protein 2 [Cucumis sativus] >KGN65805.1 hypothetical protein Csa_023350 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 4.2e-87 Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. NCBI nr
Match: XP_022964859.1 (nudC domain-containing protein 2-like [Cucurbita moschata] >XP_022970435.1 nudC domain-containing protein 2-like [Cucurbita maxima] >XP_023518977.1 nudC domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >KAG6583365.1 NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330.5 bits (846), Expect = 9.3e-87 Identity = 152/157 (96.82%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of CaUC03G050750 vs. NCBI nr
Match: KAG6607306.1 (NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85 Identity = 150/155 (96.77%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy Swiss-Prot
Match: Q8WVJ2 (NudC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NUDCD2 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-21 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy Swiss-Prot
Match: Q9CQ48 (NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-21 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy Swiss-Prot
Match: Q5M823 (NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.2e-21 Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13 Identity = 46/158 (29.11%), Postives = 75/158 (47.47%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13 Identity = 44/158 (27.85%), Postives = 75/158 (47.47%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy TrEMBL
Match: A0A5A7SMF6 (NudC domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00610 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy TrEMBL
Match: A0A1S3C618 (nudC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103497082 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy TrEMBL
Match: A0A0A0LV57 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530660 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87 Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy TrEMBL
Match: A0A6J1I2V0 (nudC domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469416 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87 Identity = 152/157 (96.82%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of CaUC03G050750 vs. ExPASy TrEMBL
Match: A0A6J1HPE6 (nudC domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464843 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87 Identity = 152/157 (96.82%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of CaUC03G050750 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 307.8 bits (787), Expect = 6.0e-84 Identity = 138/156 (88.46%), Postives = 149/156 (95.51%), Query Frame = 0
BLAST of CaUC03G050750 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 7.8e-15 Identity = 46/158 (29.11%), Postives = 75/158 (47.47%), Query Frame = 0
BLAST of CaUC03G050750 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.6e-14 Identity = 44/158 (27.85%), Postives = 75/158 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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