CaUC03G050300 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G050300
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionATP-dependent RNA helicase dbp-8
LocationCiama_Chr03: 376044 .. 376712 (+)
RNA-Seq ExpressionCaUC03G050300
SyntenyCaUC03G050300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAGATCCATGGTCGGATGCTTTGGCGCAGAAGCCCTAATTAACCATCGTCGGTGCCCGTTTCGATTAGAGAATGAACGCAACGTTGAATTCTGGAATTGTTTTCTCTGAAGGTACAGACAGAGATGTTTTTTGTGTTTTCTGATCTTTCATGTGATTCAATTTTGTTGAGGTTCTTTGGTGATGATGTTTCTTGCAAGCATAGCCGACGGAAGTGATTCGGATACGAATTCTGCTGAAGGATCAGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCTACCGTATACCTAACGGATGCCGTTTAGAGAATGCAATTTCGTCTCTTAGCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGAGGCTTCTGATTCGGCGATAAGAATGGCGTTTAGAGAGGATGAGAGTCGGCGGAATGCTCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCTGCTCCAGATTGGACTCGAATTGTTTCCGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAATGCCTAGCGTTTCCAATAATTACGGGAACTGA

mRNA sequence

TTTAGATCCATGGTCGGATGCTTTGGCGCAGAAGCCCTAATTAACCATCGTCGGTGCCCGTTTCGATTAGAGAATGAACGCAACGTTGAATTCTGGAATTGTTTTCTCTGAAGCCGACGGAAGTGATTCGGATACGAATTCTGCTGAAGGATCAGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCTACCGTATACCTAACGGATGCCGTTTAGAGAATGCAATTTCGTCTCTTAGCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGAGGCTTCTGATTCGGCGATAAGAATGGCGTTTAGAGAGGATGAGAGTCGGCGGAATGCTCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCTGCTCCAGATTGGACTCGAATTGTTTCCGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAATGCCTAGCGTTTCCAATAATTACGGGAACTGA

Coding sequence (CDS)

ATGAACGCAACGTTGAATTCTGGAATTGTTTTCTCTGAAGCCGACGGAAGTGATTCGGATACGAATTCTGCTGAAGGATCAGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCTACCGTATACCTAACGGATGCCGTTTAGAGAATGCAATTTCGTCTCTTAGCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGAGGCTTCTGATTCGGCGATAAGAATGGCGTTTAGAGAGGATGAGAGTCGGCGGAATGCTCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCTGCTCCAGATTGGACTCGAATTGTTTCCGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAATGCCTAGCGTTTCCAATAATTACGGGAACTGA

Protein sequence

MNATLNSGIVFSEADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFYRIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN
Homology
BLAST of CaUC03G050300 vs. NCBI nr
Match: XP_038894769.1 (uncharacterized protein LOC120083197 [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 156/169 (92.31%), Postives = 163/169 (96.45%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNATLNSGIVFSE  ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSE+ETYSSDPHF+
Sbjct: 1   MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSENETYSSDPHFH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
            + NGC +ENA+SSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  HLSNGCGVENAVSSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ PSVSNN+GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNFGN 169

BLAST of CaUC03G050300 vs. NCBI nr
Match: XP_022970483.1 (uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970485.1 uncharacterized protein LOC111469451 [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNA+LNSG+VFSE  ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DETYSSD H +
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
            +PNGCR+ENA+SSLSLNDDVERRCSD+EEEE MREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+  NN+GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

BLAST of CaUC03G050300 vs. NCBI nr
Match: XP_022964640.1 (uncharacterized protein LOC111464656 [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74
Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNA+LNSG+VFSE  ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DE YSSD H +
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
            +PNGCR+ENA+SSLSLNDDVERRCSD+EEEE MREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+  NN+GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

BLAST of CaUC03G050300 vs. NCBI nr
Match: XP_004153363.1 (uncharacterized protein LOC101214045 [Cucumis sativus] >KGN65844.1 hypothetical protein Csa_023255 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 6.3e-74
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNATLNSGIVF+E  ADGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSDPHF+
Sbjct: 1   MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
           ++PNGC +ENA+SSL+LNDDVERRCSDDEEEERMR ASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQ P+VSN+ GN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169

BLAST of CaUC03G050300 vs. NCBI nr
Match: XP_008457323.1 (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 149/169 (88.17%), Postives = 158/169 (93.49%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNATLNSGIVFSE   DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HF+
Sbjct: 1   MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
           ++PNGC +ENA+SSL+LNDDVERRCSDDEEEERMREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           N TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+VSN+  N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169

BLAST of CaUC03G050300 vs. ExPASy TrEMBL
Match: A0A6J1I3Z1 (uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNA+LNSG+VFSE  ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DETYSSD H +
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
            +PNGCR+ENA+SSLSLNDDVERRCSD+EEEE MREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+  NN+GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

BLAST of CaUC03G050300 vs. ExPASy TrEMBL
Match: A0A6J1HLE1 (uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC111464656 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNA+LNSG+VFSE  ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DE YSSD H +
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
            +PNGCR+ENA+SSLSLNDDVERRCSD+EEEE MREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+  NN+GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

BLAST of CaUC03G050300 vs. ExPASy TrEMBL
Match: A0A0A0LXQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNATLNSGIVF+E  ADGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSDPHF+
Sbjct: 1   MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
           ++PNGC +ENA+SSL+LNDDVERRCSDDEEEERMR ASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQ P+VSN+ GN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169

BLAST of CaUC03G050300 vs. ExPASy TrEMBL
Match: A0A1S3C5C0 (uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.8e-74
Identity = 149/169 (88.17%), Postives = 158/169 (93.49%), Query Frame = 0

Query: 1   MNATLNSGIVFSE--ADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFY 60
           MNATLNSGIVFSE   DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HF+
Sbjct: 1   MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60

Query: 61  RIPNGCRLENAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPE 120
           ++PNGC +ENA+SSL+LNDDVERRCSDDEEEERMREASDSAIRMAFREDE+RRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           N TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQ P+VSN+  N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169

BLAST of CaUC03G050300 vs. ExPASy TrEMBL
Match: A0A5A7UY79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00660 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 136/153 (88.89%), Postives = 145/153 (94.77%), Query Frame = 0

Query: 15  DGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFYRIPNGCRLENAISSLS 74
           DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HF+++PNGC +ENA+SSL+
Sbjct: 51  DGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFHQLPNGCGVENAVSSLT 110

Query: 75  LNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPENATRIMEAMRGISFGG 134
           LNDDVERRCSDDEEEERMREASDSAIRMAFREDE+RRNAPLSPEN TRIMEAMRGISFGG
Sbjct: 111 LNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGISFGG 170

Query: 135 SAPDWTRIVSEDRWIDQLRRLRQMPSVSNNYGN 168
           SAPDWTRIVSEDRWIDQLRRLRQ P+VSN+  N
Sbjct: 171 SAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 203

BLAST of CaUC03G050300 vs. TAIR 10
Match: AT1G07020.1 (unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-25
Identity = 78/149 (52.35%), Postives = 94/149 (63.09%), Query Frame = 0

Query: 16  GSDSDTNSAEGS-DYYEPISAIDGEESDEAGSEDETY-------SSDPHFYRIPNGCRLE 75
           GSDSD+NS E S DYYEPISA+D   S++   E+++Y        S+ H   IP+    E
Sbjct: 8   GSDSDSNSVEDSQDYYEPISAVDLYNSND--DEEDSYLPIGGDGLSNGH-CMIPDA---E 67

Query: 76  NAISSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDESRRNAPLSPENATRIMEAM 135
             ISS+S+ND+       D EEE   E     IR AF EDE RR +PL  ENA R+MEAM
Sbjct: 68  VGISSISINDNT------DSEEETETETGPE-IRRAFEEDERRRRSPLVEENAVRVMEAM 127

Query: 136 RGISFGGSAPDWTRIVSEDRWIDQLRRLR 157
           R ISF G+APDW   V+EDRWIDQLRRLR
Sbjct: 128 RAISFPGTAPDWASDVNEDRWIDQLRRLR 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038894769.12.5e-7892.31uncharacterized protein LOC120083197 [Benincasa hispida][more]
XP_022970483.14.4e-7588.17uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharac... [more]
XP_022964640.12.2e-7487.57uncharacterized protein LOC111464656 [Cucurbita moschata][more]
XP_004153363.16.3e-7488.17uncharacterized protein LOC101214045 [Cucumis sativus] >KGN65844.1 hypothetical ... [more]
XP_008457323.11.4e-7388.17PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1I3Z12.1e-7588.17uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451... [more]
A0A6J1HLE11.0e-7487.57uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC1114646... [more]
A0A0A0LXQ63.0e-7488.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1[more]
A0A1S3C5C06.8e-7488.17uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=... [more]
A0A5A7UY792.5e-6888.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT1G07020.19.8e-2552.35unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06910MEA1coord: 28..154
e-value: 1.2E-8
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR37175BNAA08G28800D PROTEINcoord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G050300.1CaUC03G050300.1mRNA