CaUC03G050170 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G050170
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Methyltransferase-like protein
Location	Ciama_Chr03: 280800 .. 281952 (-)
RNA-Seq Expression	CaUC03G050170
Synteny	CaUC03G050170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGAGTGGGTTGGTTGGGTTAGGTGAAAAGACAATGAAGCTTGGTTACATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCCATAATTCTCTCTCTTATTCACATCCGGAGGTCAGAGAACTGAGAAGAACGAAGGGCCTTCAAGAAAAAAACAAAAAAAGTATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTTCTTCTAATTCTTTTTCATCCCAATCTTTCATTTCCTTGTTGTTTCTTTGTTTGTGTCTGAACGGAATGATTGGTGTATGTTTGAACAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGACGAGTTTTTCGGGCTAGGGTTTTTGTTTGGGTTAATTGTATTTCTTTTCACCTCATTTTCTTCTCTTTTGTATATCTCGTGTGGATGGATAATATCTACTTTTCCCTTTCCCCTCTTCGAATTGATTTTGTAAAACCCTTCTTCTTCCTTCCTATCCAATATCTAAGTCTGCAATTCAGAAATGCTCAATCGCAAACGATTTTGATTTCAATTGGGATTTTCGAGAGATAGAGAAATTAAATCAATAAAATTGCGATAAAGACGATCAATCAACCATTGAATCGTCAATCCGTTTGCGTGAAAGCCGATCGGCTTTCCAAATTAAATCGGGGTGGCCGGCGATGAAAGACTCAAGATAAACAACTTTAAATTAAAGTTAATTTAATTTGGTAAAGATTCGTTGTGTATTTTAATATAAAATTTAGGGCAACCCAAAGTTAAGAAAAGTCTTGCGGGGAAATCGAGACTCGTGTATGCTTTTACTTTTAAACGTATTATATTCTGCACCTACAAAAAATTAAAAGAATAAAAAATTGTAAAAAAGGGTTCTTATATTCTAATCTGCAAAAACTCCATGTCATACTCAGATGTCCA

mRNA sequence

GAAAGGAGTGGGTTGGTTGGGTTAGGTGAAAAGACAATGAAGCTTGGTTACATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCCATAATTCTCTCTCTTATTCACATCCGGAGGTCAGAGAACTGAGAAGAACGAAGGGCCTTCAAGAAAAAAACAAAAAAAGTATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGACGAGTTTTTCGGGCTAGGGTTTTTGTTTGGGTTAATTGTATTTCTTTTCACCTCATTTTCTTCTCTTTTGTATATCTCGTGTGGATGGATAATATCTACTTTTCCCTTTCCCCTCTTCGAATTGATTTTGTAAAACCCTTCTTCTTCCTTCCTATCCAATATCTAAGTCTGCAATTCAGAAATGCTCAATCGCAAACGATTTTGATTTCAATTGGGATTTTCGAGAGATAGAGAAATTAAATCAATAAAATTGCGATAAAGACGATCAATCAACCATTGAATCGTCAATCCGTTTGCGTGAAAGCCGATCGGCTTTCCAAATTAAATCGGGGTGGCCGGCGATGAAAGACTCAAGATAAACAACTTTAAATTAAAGTTAATTTAATTTGGTAAAGATTCGTTGTGTATTTTAATATAAAATTTAGGGCAACCCAAAGTTAAGAAAAGTCTTGCGGGGAAATCGAGACTCGTGTATGCTTTTACTTTTAAACGTATTATATTCTGCACCTACAAAAAATTAAAAGAATAAAAAATTGTAAAAAAGGGTTCTTATATTCTAATCTGCAAAAACTCCATGTCATACTCAGATGTCCA

Coding sequence (CDS)

GAAAGGAGTGGGTTGGTTGGGTTAGGTGAAAAGACAATGAAGCTTGGTTACATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCCATAATTCTCTCTCTTATTCACATCCGGAGGTCAGAGAACTGAGAAGAACGAAGGGCCTTCAAGAAAAAAACAAAAAAAGTATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGA

Protein sequence

ERSGLVGLGEKTMKLGYMASKCSKFPNFDNSFNSLPSFYPNLISSPSHNSLSYSHPEVRELRRTKGLQEKNKKSMCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSSKVSSGFWMVVDMASGRYLWRHLFSSSEKASN

Homology

[Close]

BLAST of CaUC03G050170 vs. NCBI nr
Match: XP_038895770.1 (uncharacterized protein LOC120083933 [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 3.4e-29
Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSN----SSSKVSSGF 134
           MCPLRFILIFLSATLAGFFLLRNLKS  Q FQADDNSD+HSKDLDSN    SSSK+SSGF
Sbjct: 1   MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60

Query: 135 WMVVDMASGRYLWRHLFSSSEKASN 156
           W VVDMASGRYLWRHLFSSSEK S+
Sbjct: 61  WTVVDMASGRYLWRHLFSSSEKPSD 85

[Close]

BLAST of CaUC03G050170 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 40  PNLISSPSHN-----------SLSYSHPEVRELRRTKGLQEKNKKSMCPLRFILIFLSAT 99
           P+L+++P  N           SL +S PEV E       + +  K MCPLRFILIFLSAT
Sbjct: 29  PSLLTTPFINPKSFSNLSLSLSLHHSDPEVTE-------EARALKKMCPLRFILIFLSAT 88

Query: 100 LAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNS-SSKVS----SGFWMVVDMASGRYLW 156
           LAGFF+LRNLKS PQ F+AD+NSD HS DL SNS SSKV+    SGFW VVDMASGRYLW
Sbjct: 89  LAGFFVLRNLKSQPQDFEADENSDAHSNDLSSNSTSSKVTSAMQSGFWTVVDMASGRYLW 148

[Close]

BLAST of CaUC03G050170 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 5.9e-26
Identity = 68/86 (79.07%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNS-SSKVS----SG 134
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F+ADDNSD HS DL SNS SSKV+    SG
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 135 FWMVVDMASGRYLWRHLFSSSEKASN 156
           FW VVDMASGRYLWRHLF SS+K S+
Sbjct: 61  FWTVVDMASGRYLWRHLFPSSQKRSD 86

[Close]

BLAST of CaUC03G050170 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 125.2 bits (313), Expect = 5.0e-25
Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 134
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD  SK+LDS+ S   SKVSSGFW
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 135 MVVDMASGRYLWRHLFSSSEKASN 156
            VVDMASGRYLWRHLF SS+K S+
Sbjct: 61  TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of CaUC03G050170 vs. NCBI nr
Match: XP_022949071.1 (uncharacterized protein LOC111452533 [Cucurbita moschata] >KAG6607364.1 hypothetical protein SDJN03_00706, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNS-SSKVS----SG 134
           MCPLRFILIFLSATLAGFF+LRN+KS PQ F+A+DNSD HS DL SNS SSKV+    SG
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNIKSQPQDFEAEDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 135 FWMVVDMASGRYLWRHLFSSSEKASN 156
           FW VVDMASGRYLWR+LF SS+K S+
Sbjct: 61  FWTVVDMASGRYLWRNLFPSSQKRSD 86

[Close]

BLAST of CaUC03G050170 vs. ExPASy TrEMBL
Match: A0A6J1KER9 (uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 40  PNLISSPSHN-----------SLSYSHPEVRELRRTKGLQEKNKKSMCPLRFILIFLSAT 99
           P+L+++P  N           SL +S PEV E       + +  K MCPLRFILIFLSAT
Sbjct: 29  PSLLTTPFINPKSFSNLSLSLSLHHSDPEVTE-------EARALKKMCPLRFILIFLSAT 88

Query: 100 LAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNS-SSKVS----SGFWMVVDMASGRYLW 156
           LAGFF+LRNLKS PQ F+AD+NSD HS DL SNS SSKV+    SGFW VVDMASGRYLW
Sbjct: 89  LAGFFVLRNLKSQPQDFEADENSDAHSNDLSSNSTSSKVTSAMQSGFWTVVDMASGRYLW 148

[Close]

BLAST of CaUC03G050170 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25
Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 134
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD  SK+LDS+ S   SKVSSGFW
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 135 MVVDMASGRYLWRHLFSSSEKASN 156
            VVDMASGRYLWRHLF SS+K S+
Sbjct: 61  TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of CaUC03G050170 vs. ExPASy TrEMBL
Match: A0A6J1GAZ0 (uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC111452533 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 9.2e-25
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNS-SSKVS----SG 134
           MCPLRFILIFLSATLAGFF+LRN+KS PQ F+A+DNSD HS DL SNS SSKV+    SG
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNIKSQPQDFEAEDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 135 FWMVVDMASGRYLWRHLFSSSEKASN 156
           FW VVDMASGRYLWR+LF SS+K S+
Sbjct: 61  FWTVVDMASGRYLWRNLFPSSQKRSD 86

[Close]

BLAST of CaUC03G050170 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.7e-24
Identity = 65/81 (80.25%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQ-ADDNSDTHSKDL----DSNSSSKVSSG 134
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F+ ADDNSD HS D      SNS+SKVSSG
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 135 FWMVVDMASGRYLWRHLFSSS 151
           FW VVDMASGRYLWRHLF SS
Sbjct: 61  FWTVVDMASGRYLWRHLFPSS 81

[Close]

BLAST of CaUC03G050170 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 134
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD +S + DS+ S   SKVSSGFW
Sbjct: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 135 MVVDMASGRYLWRHLFSSSEKASN 156
            +VDMASGRYLWRHLF SS+K S+
Sbjct: 61  TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of CaUC03G050170 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS-SKV----SSG 134
           MCPLR ILIFLSATLAGFF+L+ L S       D  +D    D DS S  SKV     SG
Sbjct: 1   MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGMAMKSG 60

Query: 135 FWMVVDMASGRYLWRHLFSSSEKAS 155
           FW  VDMASGRYLW +L S+++++S
Sbjct: 61  FWTCVDMASGRYLWNNLCSNAKRSS 85

[Close]

BLAST of CaUC03G050170 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSSKVSSGFWMVV 134
           MCP+RF+L+F SA LAG+F  + + S P+     D+ D  ++  + N   K+ +GFW+ V
Sbjct: 1   MCPMRFLLVFFSAVLAGYFAWKTVSSSPEF----DSPDELNEKQELNLKKKMENGFWVFV 60

Query: 135 DMASGRYLWRHLFSSSEKA 154
           DMASGRYLWR+L    EK+
Sbjct: 61  DMASGRYLWRNLKEMREKS 75

[Close]

BLAST of CaUC03G050170 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 75  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDS-NSSSKVSSGFWMV 134
           MCPLRF+L+F SA LAG+   R + S P+ F +D+     +K+    +   K+ +G W  
Sbjct: 1   MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKEKQGLDFKRKMDNGLWTF 60

Query: 135 VDMASGRYLWRHL 147
           VDMASGRYLWR+L
Sbjct: 61  VDMASGRYLWRNL 72

The following BLAST results are available for this feature:

BLAST of CaUC03G050170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895770.1	3.4e-29	85.88	uncharacterized protein LOC120083933 [Benincasa hispida]	[more]
XP_022997733.1	2.4e-27	59.85	uncharacterized protein LOC111492605 [Cucurbita maxima]	[more]
XP_023525661.1	5.9e-26	79.07	uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]	[more]
XP_008453499.1	5.0e-25	78.57	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]
XP_022949071.1	1.9e-24	75.58	uncharacterized protein LOC111452533 [Cucurbita moschata] >KAG6607364.1 hypothet...	[more]

BLAST of CaUC03G050170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G050170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KER9	1.2e-27	59.85	uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605...	[more]
A0A1S3BWD8	2.4e-25	78.57	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
A0A6J1GAZ0	9.2e-25	75.58	uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1DPZ0	2.7e-24	80.25	uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A0A0LV42	3.5e-24	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]

BLAST of CaUC03G050170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58375.1	1.5e-14	55.29	Methyltransferase-related protein	[more]
AT5G18150.1	1.2e-13	45.57	Methyltransferase-related protein	[more]
AT5G14602.1	5.7e-11	46.58	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..119
None	No IPR available	PANTHER	PTHR34132:SF4	EXPRESSED PROTEIN	coord: 75..153
None	No IPR available	PANTHER	PTHR34132	EMB\|CAB87627.1-RELATED	coord: 75..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G050170.1	CaUC03G050170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity