CaUC03G050090 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G050090
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	28S ribosomal protein S29, mitochondrial
Location	Ciama_Chr03: 195716 .. 202563 (+)
RNA-Seq Expression	CaUC03G050090
Synteny	CaUC03G050090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGGCTGTTAGAAGGAGGCGCACACTTCACAGAGTCCTGCAAAACCCAAAACCTCGCGTTCGTCTTCGTTCCCATCTCCGACCGGCGGAAAATGTTGCGGTCAATTCTCAGAGCAACAGCCGCAGCCTCCAAACCCCACCTATGCAATCGAAACCCTTCTCCGATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAGGGAAAGTCCAAGGCCGACGCCAAAGCCGGTGATGACTCCTCCGCTTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTCTGATGATATACCCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAAGTACGTATGTTTTCTACATTGTTTATGAGTGAATGTTTATTGGGATGTTTATTCATTTCTTTACGAAATGGAAGTATGGAAGGACTTAATAAGGTACTGCCGGAGGGTTTGCCGTTGGGGATGGTCAAGGAGTTTGAAGAGTCTATGCGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGCGACAACTTCAGGCGCGTGGTTGATCCCTCATTGCTGTCACCGGCTGGTATTACTTTTCTTCTACTGTCTTTTCTTTTTGGAGGGGGGCTTAGGCAAATGGTTCTCGTGTTGTTTATTTATACCGAAGTGACTGGTAATTTAGGCTCGAATCTGGACGCTTGAACGTCTGAATCTTTGGTCGAACAAATGTATTCAAGTATTTTCTTGCTGCTATTCCTATTCAAATGTCCAGGTTCAAATATTAGAAAACAGATCGTCTTGGATGGTCCGGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGTGATGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACTCATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAGTTAGATTGAAGTATTGGTATGCTTTTTTCAGGATCTTCTGGTGCATTTGTTACGAATATGCAGGTCCAAATTTCAATAGTTATCTTCCCCAGCCTCTGAAGTCTTTTGGACCGCTATCGCATGTTTTATTATTCATCTTTTTAACTCTCAAATCTTGTATGTGCATCAGATTTAGACATGTAGTTTACTGATATACTTCCTAGTTCTATTGACAAATGTTAATTCTTACTAACCATGTTGAGAATCTGGACAAGGGAAATGATCTCTCATGATCGTGATTGTTTAGGGTAGGGCTGACTGGGAAATGTTTTATGCCCTGTGTTTACTGTGTTGTTGATAAGCTTTCAGGAGATCATGTGAGGATTGCGGATAAATATATAATGCTGAAACAGTTGACTTATTTACTTTTCTTTGGTGGGCTGGTTTTGACCAGGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAATTGACATGCCAAATATCTGAACCTATACCATTGGGAGAGGGTGTTGGCGTTGGGATGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAACTTTATACGACTTAATTGATACTGGAATCAAACATACTCATGCGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAGTGAGACACAAGTCTACATTTACCCTTTCTTTGATTTCTAAAATTAAGTTTCTTGCATGAATTAAATCTTCCAAAATTAATTTTAGTAGCAATAATGATTGTTACTTCTTGTCCAGTATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTTAGTACTACTTGTTTGGATTGAAATTGTTGTGTTCTATTCAATTCCATTTTTTGTGAATACAGGTGAAGAAATGTAATGTAAGGCTTGGGATTTATTGTTCCCTTGTCTCCTTTCTGTTAGATATGAAATCTGATAGGTCTTTTTTTATCCCAGAAAAAAAGAAAACGAAAAAAAAAAGGACAAAAGAAAAAAAGGGAACAAAGAATCAGGGAGTACAAATAGATTATCTGGAGAAAGAGGGTTGATGACTCATTCAGTAATAGTATGCCAATGGCACAACTCGACTAGTGAGTTAAAAATGGAAAAACGAAAATTTGGTTCTAAATGGTTGGAGGATGTAAAAATTAGGTTCAGTTACAAGTTTGGCTCAAATTTACAAAGTTGTGTCAATTAGGTTCTTGAAAGTAACTTAAAAAAATTTATAATAAGTTTCTAAATTTTTTCTTTATGTTGTGTCGCAGACTGGAATCATATTCTTGGAATAGTTTTGCTTTTGCTTGGTCTATTTGGAATTTATTTTTTTCTTCTTTTGAGACGTGTTTGGTCCGATTAGCCATTGAGATTGCAGGGAGATGGTTAAGGACTTCTTCTCCATCTGCCGTTTTGAGAGAGGGAGAGGTTCTTATGGCAAGTTGGGATTTGTGCTTTGTTGTGGAGTGAGGAACAACATAACCTTTAGAGGAGTTGAGAGAGGTCTTTGTGATGTTTGAATCCTTGTTAGGTTCTATGTATCTCTTTGGCCGTTGTTGAAGAAGTGTTTTGTTATTATTCCTTAAGTCTTATTCTTTTTTATTGGAGTCTTCCTCTAAGAGGGCTCTCTTTTCTAGCCTTGGTGTTTTTGGATGCCATTGTATTTTCATTCTTTTTTTCAATGGAAGTTGACCTTTTTAAATTTTTTTTTACTTTAATGTTGTGTCAAACTTTAAAAACCATCTAATTTGTCTTTGAATTCGCACTTTTATGTCTAACAAGTTCATGAACTTTCAATTATGTGTCTAAATAGGTTTCTAATCTATGAGACATTATTTAAAGTTCAAGGACTTGTTAGACTCAAAATTAACAGTTTAGAGACCTTAAATGCTCTTAAAGTTTTGGGATATGTATGATAAAAACCATCTAATTTGTCTTTAAAGTTTAGGCACATTGTGTCTAACTTTACAAGTTTAGAGATAAAACTTAGAATTTCTTTTTTTCAATCAATGATAAAAATTACTAATCTTTTTGCAGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTGGGTGCTTTCTCCCATTCAACTGCCGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTGCCTCTAGGTGCACGTGTTAATTTCCCTCGCTATAGTCTTGATGAAGCAGCTTCTGTTTCCTACTACTACCTCAGGTATGCTTATATTGTTGTTTTTTTTTTTTTTAATGAGAAACATCCAATCAGAATTTCATTGATGTATGAAATTACATAAGGGCAACATGTGCCATGAGGGATTGCATCATACCATTCCAGAGCGATATAAGAGATGTGAGATAGTAATCACAAAAATAAGAACTGAATTTACACCAAGAAAGAGATGTATGCAAAAGGTGTTAAATAAAGGGTGGGATGTCTGATTCCTTGTCTTCGAAGATGCGATGCTTCCTCTAGATTAGCCACAAAAAGGCTTTGATGATAAATGTCCACAATCTCTTTCTTCTTCTTAAGAGGATGACCTATAAGAAGCATATTCAGAAAGATGAGAGGATTGTTTCAAAAACTCATAGGATAATTGGAAGAAATCAAGAATCTGTTCCAAAAAAGATTGTATATATTCACAAAGAACGAAAATGTGCACAAGGGATTCACGGCTCCTGTGGCAAGGAGCACAACAACTAGGTCCAGATACAATCCAAGGAGCTTTTCTGATAAGTGTGTTGGCTGTATTAATGTTGCCATAGCTAACTTCCCATAGAAAGAATCGGACATTTTTTGGTATGGGACCCTTCCAAATATTCTTGTAGAGTGCAGCGTTTTGGATGTTTCCATTAGAAGCAAGATATTGGGAAAGCGATCTTGTATTGAACTGGCCTGATGTATCAAGATTCCATTTCCAAGTATCATCAACCATGGGTCTGGAGGGGGGCTGCAATAGAGTGGATAAAATAGACCATTCTAATATCTCTGTTTCATTAAGATTATGTCTCACGCCAAGATCCCATGAATCATATTCTCTGTTCCAGCATTGGGCTACCAACTTCTGGTTGGTGAGAGCAAAAAGTCTAGGGAACGCTTCCTTTAGAGGGGAGGTTCCAATCTAGTTGTCATTCCAAAAAGACGTAGCTTCTTCATTACCAATGATGTTACAGCATTTTCATGTATAAGCTCCACCAGCTTTACAATATATTTCCACGGGCCCTTTGATTGCTTGAGATAGCTGCGCCGAGGTTGAAGAGATGAGCCATATTTAGCATCAATAAGGCGTCTGAAAGGGCATCCTTTTCAAAATGATATCTCCAAATCCACTTTGCCAGGAGACTATGGTTCTCTTGAATTTTATATCAGTCAAGCCGAGACCTCCCTCAAGGATGGGAAGCTGTACTTTTTGCCATCTAATGGAGTGGATCCCTCTTTTTTCCTTGTTTCCATTTCAGAGAAATCCTATATAATTTCTCGATGTGAGTAGCAGTCTTGTTATTTTAGAAGGAAACTAATTTCACCGAAATAAATTAAGATTGTTATATAAATAGAAAAAAGGAATCTTTACAAAAGCTTTGTTTGATTAAGGACTTAGAATAAGCCCCTATTTGGCTATTAGAGGAGATAAAGAGTTTTTAAAAAGGAAAAACTCCTCTCATCGACTCTAATAGAGGTGATAGTAAGCTGCAGAATGAGTTAGCTGTCTTACATGGTATTGCTAACTCCCTTCTCTTGACCTATATTCTAAAAATTTTCTTATTTGGACGTCCTCAAATCTCATAAGATAGAAAGGTGATCTTGACTTAATGATACTAGATCGACTAGAAGACTTGCTAATTAGAGGGCCCAGCCGTCTTAGGAGAGTCCTGTTGGTCTAGACATAGACTCCTATTAACAAGTTAAAGCCGTCCGAAATTTTCCTGTATGCTCCTAGTAAGAGAACAATGGACAAAACAAGTGATCATGATTTATCTCCGTGTGCGTAGTGGGTGGGGAGTTGGGACATCTTTTTGGCACCATATATTTGCCTTGATTTTCTACTATATTTTTAAAATTTTGTTTAATCGTTTTAGAATCCGAACTTTGAAAAAATAACATAATGTACGAAAGCTTATATTATTATAAACTAAAACATTTCATTGAAAAAACCGAAATATACAAGGGACTATAGTCGAGGAAACTACTAGAATTTCTCCTACTTCGATTAATGGTGCTTAGAGAGTAGTTAGAGAAAGGACTACAATACTCCAAGAAAAAGAAATAAAAACAAGGCTAAATTAAACAAAATACCCTCGAATTTTGCATGTTGTATCAAAAATATTATTAAACTTTCAAAAGTTTTAAAAATGTCCTTGATCTATAAAAAAAGTTCAAAAATACCTTGCTGTTACTTTTGGATGAAAACCATTGATGTTTTGTTTCAAAACTACCGTTGAACTATCAAAAGTTTAAAAAATACCCTTAAACTTTAAAAAACTTCTAAAATATCCTTATTGTTAATTAGTATATGAATACAAATCCTCATTACTCATTTCAAAAATATTCTTGAGCTTCCAAAATTATGCTCTAGCTTACAAAAGAAAAAAAAAGTTAAAAATGCTCCAATATTAGTATAGCGATAAATTTGTTTGAAGGTTTCTTGCGTTCGAAAAGAATCAATTTTAAAACAAATTATATATAGAAATGCTAGGTCATACATAGAAATAGAGGAGATAGGGGAAATGGAAGAGGGAGATAATGTGGTGTAGATAAATAGTAGGAGCATATTTAACCTTTTTTTTTTTTTAAAAAAAAATTAATATAACATAACTAATGCAACCTTTTGAAAATTTAGAGGTATTTTAGGAACAAGGGGTTAACAATTTCAATTCATATATTAATAGTAAGGGTAGTTTTGAACTTTTCTTTAAGTTTAAGGATATTTTTTAAACAATACACTAACAGTTTCCATAAAAACTAACAATTAAGCTATTTTTTAACTGTTCTTGAAATTTCAAGAGTATTTTTGAAACAAAGTGCAAAGTTTAAGGGTATTTTGTATAATTTAACTTAAAAACTACTGTATTGCGAAACTATCAAGTGTTCCATCAATCCCTTGTTGCTGCAGGTGAGAGTTTCCTTGGTCAATAGAATAGGTAGTTACGTAATTTGCTGATAAGGCAGGGACACTGCTTTCTGTGAAGGTTGAGGATCCCTTTTGTAACTGTTAACTGTAAATCTTAATGGCCGTCAGTTAAACCTTAATTGGGGTGGTTGATGAAGTCTAATCTAATCGATTATGTGAGGGTTTTCTCTGAACAAACATTCAGTACATTTGAGGGGATTAAAAGTAATGAACAAGATGCATATTGCTTCATAAAGATCTGTAACATGAATGACGATGTAGTCTAAAATTTGAAGTTGCATATGTATACATATGTTTCATTGTGGGTGATTGTTTGCTTAGTTAGTCGTTCATGATTTCCTTGACAGACAAAGACTGATACGGCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGACACCAATGAGGCCGATCTCCTCCTCGCCTGCTCGACTGCGGACTCGGTACACCATCGCTTAG

mRNA sequence

GTTAGGCTGTTAGAAGGAGGCGCACACTTCACAGAGTCCTGCAAAACCCAAAACCTCGCGTTCGTCTTCGTTCCCATCTCCGACCGGCGGAAAATGTTGCGGTCAATTCTCAGAGCAACAGCCGCAGCCTCCAAACCCCACCTATGCAATCGAAACCCTTCTCCGATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAGGGAAAGTCCAAGGCCGACGCCAAAGCCGGTGATGACTCCTCCGCTTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTCTGATGATATACCCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGGACTTAATAAGGTACTGCCGGAGGGTTTGCCGTTGGGGATGGTCAAGGAGTTTGAAGAGTCTATGCGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGCGACAACTTCAGGCGCGTGGTTGATCCCTCATTGCTGTCACCGGCTGGTATTACTTTTCTTCTACTGTCTTTTCTTTTTGGAGGGGGGCTTAGGCAAATGGTTCTCGTGTTGTTTATTTATACCGAAGTGACTGGTTCAAATATTAGAAAACAGATCGTCTTGGATGGTCCGGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGTGATGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACTCATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAGTTAGATTGAAGTATTGGGTAGGGCTGACTGGGAAATGTTTTATGCCCTGTGTTTACTGTGTTGTTGATAAGCTTTCAGGAGATCATGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAATTGACATGCCAAATATCTGAACCTATACCATTGGGAGAGGGTGTTGGCGTTGGGATGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAACTTTATACGACTTAATTGATACTGGAATCAAACATACTCATGCGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTGGGTGCTTTCTCCCATTCAACTGCCGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTGCCTCTAGATATACTATTTGTCGAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGACACCAATGAGGCCGATCTCCTCCTCGCCTGCTCGACTGCGGACTCGGTACACCATCGCTTAG

Coding sequence (CDS)

ATGTTGCGGTCAATTCTCAGAGCAACAGCCGCAGCCTCCAAACCCCACCTATGCAATCGAAACCCTTCTCCGATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGCCAAGAAGGGAAAGTCCAAGGCCGACGCCAAAGCCGGTGATGACTCCTCCGCTTCCGCTGCTGCTTCCGACGACTTAGATGCGGCGCTTTCTGATGATATACCCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGGACTTAATAAGGTACTGCCGGAGGGTTTGCCGTTGGGGATGGTCAAGGAGTTTGAAGAGTCTATGCGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGCGACAACTTCAGGCGCGTGGTTGATCCCTCATTGCTGTCACCGGCTGGTATTACTTTTCTTCTACTGTCTTTTCTTTTTGGAGGGGGGCTTAGGCAAATGGTTCTCGTGTTGTTTATTTATACCGAAGTGACTGGTTCAAATATTAGAAAACAGATCGTCTTGGATGGTCCGGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGTGATGAAGGTTGGCTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACTCATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAGTTAGATTGAAGTATTGGGTAGGGCTGACTGGGAAATGTTTTATGCCCTGTGTTTACTGTGTTGTTGATAAGCTTTCAGGAGATCATGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAATTGACATGCCAAATATCTGAACCTATACCATTGGGAGAGGGTGTTGGCGTTGGGATGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCAACTTTATACGACTTAATTGATACTGGAATCAAACATACTCATGCGGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGACATGATGGTGGGTGCTTTCTCCCATTCAACTGCCGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTGCCTCTAGATATACTATTTGTCGAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTGATGCGGTGACACCAATGAGGCCGATCTCCTCCTCGCCTGCTCGACTGCGGACTCGGTACACCATCGCTTAG

Protein sequence

MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSSASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFMPCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDILFVEWKWSRNAVVGTIDAVTPMRPISSSPARLRTRYTIA

Homology

[Close]

BLAST of CaUC03G050090 vs. NCBI nr
Match: XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida])

HSP 1 Score: 703.4 bits (1814), Expect = 1.5e-198
Identity = 375/463 (80.99%), Postives = 383/463 (82.72%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSIL+ATAAASK HLCNRNP PILSLTSNYSAK TKS++KKAKKGKSKAD KAGDD S
Sbjct: 1   MLRSILKATAAASKSHLCNRNPFPILSLTSNYSAKVTKSSIKKAKKGKSKADGKAGDDLS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAA+DDLDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAATDDLDAALSDDKSRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLV WARDEGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVHWARDEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFF+NPQTGLWDTPVQAEDVL+                        
Sbjct: 241 VLYVPSGRRWTHGGFFFRNPQTGLWDTPVQAEDVLK------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNET LRQL CQISEPI LGEGVGVGMMKGADSMTMP+GSTL
Sbjct: 301 --------------DFLKYNETCLRQLPCQISEPILLGEGVGVGMMKGADSMTMPDGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 396

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 396

[Close]

BLAST of CaUC03G050090 vs. NCBI nr
Match: XP_022154896.1 (28S ribosomal protein S29, mitochondrial [Momordica charantia])

HSP 1 Score: 697.2 bits (1798), Expect = 1.0e-196
Identity = 370/464 (79.74%), Postives = 380/464 (81.90%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRS+LRA AAASK HLCNRNPSPILSL+SNYSAKT KSTVKK KKGKS ADAKA DD S
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A+AAASDDLDAALSDD  RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLPLGMVKEFEESMRSAVLVR+SFL+LRDNFRRVVDPSL SP G+  
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGL-- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                       IRKQIVLDGPVNCGKS ALAMLV WARDEGWL
Sbjct: 181 ---------------------------KIRKQIVLDGPVNCGKSTALAMLVHWARDEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTP+QAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPIQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNETRLRQL CQISEPIPLGEGVGVGMMKGADSMTMPEGSTL
Sbjct: 301 --------------DFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR 
Sbjct: 361 YDLIDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRT 397

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD 465
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD 397

[Close]

BLAST of CaUC03G050090 vs. NCBI nr
Match: XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa])

HSP 1 Score: 695.7 bits (1794), Expect = 3.0e-196
Identity = 373/463 (80.56%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSILRATAAASK H CNRNPSPILS TSNYSAKTTK  VKK KKGKS+ADAKAGDD S
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           AS AASD+LDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLV WAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNE RLRQL CQISEPIPLGEGVGVGM KGADSM MP+GSTL
Sbjct: 301 --------------DFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 395

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 395

[Close]

BLAST of CaUC03G050090 vs. NCBI nr
Match: XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus])

HSP 1 Score: 694.9 bits (1792), Expect = 5.2e-196
Identity = 371/463 (80.13%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           M+RSILRATAAASK H  NRNPSPILSLTSNYSAKTTKS VKK KKGKS+ADAKAGDD S
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           K NMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLVQWAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DF+KYNET+LRQL CQISEPIPLGEG GVGM KGADSM MPEGSTL
Sbjct: 301 --------------DFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 396

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 396

[Close]

BLAST of CaUC03G050090 vs. NCBI nr
Match: XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus])

HSP 1 Score: 693.7 bits (1789), Expect = 1.1e-195
Identity = 370/463 (79.91%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSILRAT+AASK H+CNRNP+PILSLTSNYSAKTTK  VKK KKGKS+ADAKAGDD S
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAASDDLDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           K+NMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLVQWAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKN QTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNHQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNE +LRQL CQI EPIPLGEG GVGM KGADSM MPEGSTL
Sbjct: 301 --------------DFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 396

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 396

[Close]

BLAST of CaUC03G050090 vs. ExPASy TrEMBL
Match: A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 5.0e-197
Identity = 370/464 (79.74%), Postives = 380/464 (81.90%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRS+LRA AAASK HLCNRNPSPILSL+SNYSAKT KSTVKK KKGKS ADAKA DD S
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A+AAASDDLDAALSDD  RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLPLGMVKEFEESMRSAVLVR+SFL+LRDNFRRVVDPSL SP G+  
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGL-- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                       IRKQIVLDGPVNCGKS ALAMLV WARDEGWL
Sbjct: 181 ---------------------------KIRKQIVLDGPVNCGKSTALAMLVHWARDEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTP+QAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPIQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNETRLRQL CQISEPIPLGEGVGVGMMKGADSMTMPEGSTL
Sbjct: 301 --------------DFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR 
Sbjct: 361 YDLIDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRT 397

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD 465
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLD 397

[Close]

BLAST of CaUC03G050090 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.5e-196
Identity = 373/463 (80.56%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSILRATAAASK H CNRNPSPILS TSNYSAKTTK  VKK KKGKS+ADAKAGDD S
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           AS AASD+LDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLV WAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNE RLRQL CQISEPIPLGEGVGVGM KGADSM MP+GSTL
Sbjct: 301 --------------DFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 395

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 395

[Close]

BLAST of CaUC03G050090 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.5e-196
Identity = 373/463 (80.56%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSILRATAAASK H CNRNPSPILS TSNYSAKTTK  VKK KKGKS+ADAKAGDD S
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           AS AASD+LDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  AS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           KFNMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLV WAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNE RLRQL CQISEPIPLGEGVGVGM KGADSM MP+GSTL
Sbjct: 301 --------------DFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 395

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 395

[Close]

BLAST of CaUC03G050090 vs. ExPASy TrEMBL
Match: A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 3.3e-196
Identity = 371/463 (80.13%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           M+RSILRATAAASK H  NRNPSPILSLTSNYSAKTTKS VKK KKGKS+ADAKAGDD S
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           K NMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLVQWAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DF+KYNET+LRQL CQISEPIPLGEG GVGM KGADSM MPEGSTL
Sbjct: 301 --------------DFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 396

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 396

[Close]

BLAST of CaUC03G050090 vs. ExPASy TrEMBL
Match: A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 5.6e-196
Identity = 370/463 (79.91%), Postives = 380/463 (82.07%), Query Frame = 0


Query: 1   MLRSILRATAAASKPHLCNRNPSPILSLTSNYSAKTTKSTVKKAKKGKSKADAKAGDDSS 60
           MLRSILRAT+AASK H+CNRNP+PILSLTSNYSAKTTK  VKK KKGKS+ADAKAGDD S
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  ASAAASDDLDAALSDDIPRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           ASAAASDDLDAALSDD  RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KFNMEGLNKVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITF 180
           K+NMEGLN+VLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA    
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA---- 180

Query: 181 LLLSFLFGGGLRQMVLVLFIYTEVTGSNIRKQIVLDGPVNCGKSIALAMLVQWARDEGWL 240
                                    GS IRKQIVLDGPVNCGKSIALAMLVQWAR+EGWL
Sbjct: 181 -------------------------GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWL 240

Query: 241 VLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRVRTFSCYLRVRLKYWVGLTGKCFM 300
           VLYVPSGRRWTHGGFFFKN QTGLWDTPVQAEDVLR                        
Sbjct: 241 VLYVPSGRRWTHGGFFFKNHQTGLWDTPVQAEDVLR------------------------ 300

Query: 301 PCVYCVVDKLSGDHDFLKYNETRLRQLTCQISEPIPLGEGVGVGMMKGADSMTMPEGSTL 360
                         DFLKYNE +LRQL CQI EPIPLGEG GVGM KGADSM MPEGSTL
Sbjct: 301 --------------DFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTL 360

Query: 361 YDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 420
           YDLIDTGIKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP
Sbjct: 361 YDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRP 396

Query: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 464
           IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL
Sbjct: 421 IHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL 396

[Close]

BLAST of CaUC03G050090 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )

HSP 1 Score: 461.1 bits (1185), Expect = 1.2e-129
Identity = 246/435 (56.55%), Postives = 293/435 (67.36%), Query Frame = 0


Query: 33  SAKTTKSTVKKAKKGKSKADAKAGDDSSASAAASDDLDAALSDDIP--RARRLAAEENDT 92
           S+K+TKS++ K KK + K     G D  A+ A   +  AA  DD+   RA+RLA +E   
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112

Query: 93  SLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEGLNKVLPEGLPLGMVKEFEESMRS 152
           SLDVGPNGRPLFT   ++LSQLT KD G+YFKF+   L  VLPEGL  G+  EF ES R 
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172

Query: 153 AVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLFGGGLRQMVLVLFIYTEVTGSNI 212
           A+LVR+S+L LRDNFRR+ DP +                             ++  G  +
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWP---------------------------SDSKGVKL 232

Query: 213 RKQIVLDGPVNCGKSIALAMLVQWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 272
           +KQIVLDGPV CGKSIALAMLV WARDEGWLVLY P GR WTHGG+F+KNP TG WDTP+
Sbjct: 233 QKQIVLDGPVKCGKSIALAMLVHWARDEGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPL 292

Query: 273 QAEDVLRVRTFSCYLRVRLKYWVGLTGKCFMPCVYCVVDKLSGDHDFLKYNETRLRQLTC 332
           QAE++L+                                      DF+K+NE+RLR+L C
Sbjct: 293 QAENILK--------------------------------------DFVKFNESRLRELRC 352

Query: 333 QISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVK 392
           +I +PI LGEG GVG +KGAD+M +PE STLYDL+  GIK THAAV VVVRLRKELS+VK
Sbjct: 353 KIHDPIVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVK 412

Query: 393 DIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHST 452
           D+PVLI IDQYN+WFTFSE+EEPVT RS RPIHAREL  V AFRSMMH+DMMVGAFSHST
Sbjct: 413 DVPVLIVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHST 422

Query: 453 AVGKLRQDLPDVPLD 465
           AVGKLR+DLPDVP+D
Sbjct: 473 AVGKLRKDLPDVPVD 422

The following BLAST results are available for this feature:

BLAST of CaUC03G050090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895729.1	1.5e-198	80.99	28S ribosomal protein S29, mitochondrial [Benincasa hispida]	[more]
XP_022154896.1	1.0e-196	79.74	28S ribosomal protein S29, mitochondrial [Momordica charantia]	[more]
XP_008457304.1	3.0e-196	80.56	PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1...	[more]
XP_004145300.3	5.2e-196	80.13	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothe...	[more]
XP_011657272.1	1.1e-195	79.91	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypotheti...	[more]

BLAST of CaUC03G050090 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G050090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ31	5.0e-197	79.74	28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7UZA8	1.5e-196	80.56	28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C6G8	1.5e-196	80.56	28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026...	[more]
A0A0A0LVC2	3.3e-196	80.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1	[more]
A0A0A0KG66	5.6e-196	79.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1	[more]

BLAST of CaUC03G050090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16870.1	1.2e-129	56.55	mitochondrial 28S ribosomal protein S29-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 210..276 e-value: 3.2E-8 score: 33.1 coord: 316..444 e-value: 5.3E-13 score: 48.8
IPR019368	Ribosomal protein S23/S29, mitochondrial	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 2..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G050090.1	CaUC03G050090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome