CaUC02G049380 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGGGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGTGGATGGTGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGGGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGTGGATGGTGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGGGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGTGGATGGTGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAGSAGTAGASESKEWRNDNREKVDGGESLPSSYLSSEDMELEKEMWERFYGTGFWRTPSQRET Homology
BLAST of CaUC02G049380 vs. NCBI nr
Match: KAA0040078.1 (uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa] >TYK21702.1 uncharacterized protein E5676_scaffold859G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 260.8 bits (665), Expect = 7.5e-66 Identity = 132/151 (87.42%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of CaUC02G049380 vs. NCBI nr
Match: XP_038901895.1 (uncharacterized protein LOC120088573 [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65 Identity = 132/152 (86.84%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CaUC02G049380 vs. NCBI nr
Match: XP_008449841.1 (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 6.3e-65 Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of CaUC02G049380 vs. NCBI nr
Match: KAE8649474.1 (hypothetical protein Csa_018184 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 4.5e-63 Identity = 130/150 (86.67%), Postives = 134/150 (89.33%), Query Frame = 0
BLAST of CaUC02G049380 vs. NCBI nr
Match: KAG6570325.1 (hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010219.1 hypothetical protein SDJN02_27011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.4 bits (625), Expect = 3.2e-61 Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of CaUC02G049380 vs. ExPASy TrEMBL
Match: A0A5D3DDP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00690 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.6e-66 Identity = 132/151 (87.42%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of CaUC02G049380 vs. ExPASy TrEMBL
Match: A0A0A0L1Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65 Identity = 133/154 (86.36%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of CaUC02G049380 vs. ExPASy TrEMBL
Match: A0A1S3BMC5 (uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65 Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of CaUC02G049380 vs. ExPASy TrEMBL
Match: A0A6J1FTZ9 (uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC111448127 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60 Identity = 122/151 (80.79%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of CaUC02G049380 vs. ExPASy TrEMBL
Match: A0A6J1JA30 (uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 5.0e-60 Identity = 121/153 (79.08%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CaUC02G049380 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25 Identity = 67/161 (41.61%), Postives = 97/161 (60.25%), Query Frame = 0
BLAST of CaUC02G049380 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of CaUC02G049380 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 8.1e-18 Identity = 52/148 (35.14%), Postives = 76/148 (51.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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