CaUC02G048030 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G048030
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	axoneme-associated protein mst101(2)-like
Location	Ciama_Chr02: 35892192 .. 35897116 (+)
RNA-Seq Expression	CaUC02G048030
Synteny	CaUC02G048030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTAGAGTTCCAGTTGGTAACACTTTTTGATAACCAAGGTACAGGAGGCTCCACTCTTTGCATTATGCTCACGAAGATCTTACGCAGCGAAGCGAACTCCTCTATCATCTTACATTTCCTCTGTGTCTGTCTTTATTTTTCACTGAGGTTTTGCCCTTCTCAAAGCTTCAGAGAACGAAAATTTTAAATAATTGCATTTTTTTTTACTAGAGCTTGGACTTAGGAATTTAGAGATTATCTCCAGATGTCTCAAGCTCGGCTCTTGCTATGAAAGGGAGCTGTTTCTCAGGGGTCCTGTAAATTCATTAAGATGGATCTTTACATTGATCTTTGATAGCACTCAAAGATATTCCCATTGTGAATTTATATTAGATACCTAGTCATTTTAGTCAATCTTGAACCATAAGATAACAAATTTTAATCTTTTGGCTCTGTTAATTTCGATGCTAAAGCCACGATAAGAAGTTTTGGATATGTAGGGTCCTAAGTATACCAATTGGAACCCAAGGCCAAGGCTAGAGGGTACTTGGATTGAAAAGCTTGCAAAGCCTAAAATTATTTACTACTACCCGACACGTGTGTATATACAATGCATATATGTCAATTATAGGGAGGTAGATTGAACCTTCGACTACAGGGTAGGGAGTGTATGTCAATTATTGTTGAGTATATATGTCAATTATAGGGAGGTAGATTGAACCTTCGACTACAGGGTAGGGAGTGTATGTCAATTATTGTTGAGTTAGACGACAATATAATATATTAAAATTTAATTGCAGTTTTTTTTTCAAGGTACTTGGGAGAGTTTTGTCACGTTTAACTATAGTTCTCCTTTCAATTTGTAGTCATTTAAAGTACATAAAATGTAAATATGGTTTTAGAAATTATTTTAAATGATAAAATTGTTGAAAATATTTACAAATAATAGTAAAATATCAGTCTATTTGAGAAAGAATTCGCTAGATTACTATCTGTGTGGATAGTAAAATTTTGCAAAATTTGTAAATATTTTGGTTTAGAAACTATATTTGAAAACAACTCGTATAGTTTTATATTTTTATTTGAAGTTTTATAATTTTAGTTTGATAATATGAAATAAATTGTAATTTTGGTTTGATAATCGACTTTTTGATAAATTTAAAAAAAATAACCTACCTTGCAAATTTAGGAGTTATTTAAGACCACTAAAAATCAATTTTGTACTTGGGATAAAAGTTCGATGAAAGTGTTTTTTTTTTTTTTTTCTTCCAATTTGGCAATGTTATATAACTAATAATGGATCTTGATTTACATTGTGAATAGCAAGTTGAAGTATATAATAATTTTGATAATGCTTGTATTCACAAAGTAATTTTGAAAACAAAAATAAAAATTTGCCATATAATAATGGTAGTGTGAGAATATTAATGGAAAGGTAAATTTTGTAATAATAATAAATAAATAAATAAATAAAATATCCAACCTGAAATATCTAATATTCTTGTGTGAAATATGAAGGGAGAGGATGCCATATCATAAATTGAAAAAAGAAATGAATTAAATTAAATTAATTTAAGGATGGTTTTCAAATATAACCAAAAAAAAAAAAAGTTAATTTATTTATAAATATAACAAAATGTCATTGTCTGTTGTCTATCATTAATAAACAATGACATTTTGCAAGATTTGAAACAATTGTATCATTTAAAACAATTACTCTTAAACTAATATTATGTATTAAATTAGTATGTAATTCATCCGTTTAACCACCCACCATTTCATCAAAAGCTTTTTATAATTGTTAAGTCATTTTTCCAAATCGGAGCTAAAGTGTTGGTTGTGAAAATTAGATCAAATAGACATCAATTTCTAATGTGAGAGATCAAATATTTTGACAAAATACACTTTTAGTCTGCAAGAGCATTTTGTCCTAAAATTACATTTTAGCCTTGGTTTAATTTCCTTTATTTTTTAGGAAATTGTTTTAAATAGCAATGCATGAAAATATTTACAAATATAAAAAAATTTTACGTTCTATCCGTAATAGATCCAAATGACTAGACAGTAAAATTTGTTAAATTTTAGCTATTTTGCTATTTGAAAACAATAATTATTTTATTATATTTATATGTGAAAGAAATAAAATAAAATAAAAAATAAAAGAAGCAAACCCTACGCTCCATCTTTGTTTCCCCACTTCTATTCACTCCTTCATCCAGCAGCCGCACCGTCCGATCAGCACTGGCAGCTCTGTTTTTCTTTTCCTTCTATCTTAGCTTCCTCTGTATTGCCGTCGCAGATCGCCGTCACACCCCCACTGCCATTTTTCTTTCTCCTCTTCTTATCTCACGCTCTGCTGCAGCCTCACGCCGCCACGCCAACCCCGTCTTCTGCTGCAGCCATCCGTCAATTGGTAAGTTACCTTCGAAATCTGCCTCGATCAGAAAGAAAACAAATTCTTTGATTCAACCAACTTTGATTTTGAGTAGGATAGGTTTGGAATTAGGCCAATTTTGATTGAAAAACCTGCCAAAACCGACCTCTTTTGAATGGAATTTTGTTCGTCTATTTCTTTCTTTCTCGGCATTTGTTTTCAATTTTATCTTTGATTGTTTTTCCCCCCTGGTGTTGTCATTTATTGTTCTTGAACTCGAAGTTTTTGCTTCGCAGTGACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACGGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCAGTAATTTCTCTTTATCCCTCTGAATTCAGCTCATTTACGATTTATCTGTGCATATATTATACTCCTTAAATTTCCTTTCGAACATATATCTTTAGGGCGAATTTCATTGTTTCAATCGATTCTTTATCAGTTAAGAGACTAGGTTTCTTTCTGAAATTACAGTCTGTATGAAAGCTTTGGGTTCAATTTTTCTTTTATTTTATAATTTTGTGCCTTTATGATAGCAAAGAATTTTACATGTGAGGAAAAAATACTACAAATCTTATATGCAATGCCATTTTGTATTTTTTTTTTTTATATCCGTGTGTGTCTGGGCCAGCTTACACGCATCTTGACTAATCTCACGGGACAACCTGACCCTACAACATTTGAGTGTCAAGGAAGCTCATAGGAAATAAATTCTTAGATAGGTGGCCACCATGGATTGAACTCTTGACCTCTTAGTCATTTTTTGAAACTATGTTTCCTTTTTATCACTAGAGCAACCCAGGATGGTTGCAATGTCATTTTGTATTAAAAATCCGCATTGCCTTTTGTATTATACTTGTAGTGCAGTGAATCCTCTGAGCTCTTAAAAGTGAATGTATGTACTAATTATTGTAGTGCAAGCGGAAATAATAAAGTGATTCGATAGTTTGACTTCGGTTAGCAATCATACATGAGATTTGATTACATAGACGTTGGAAATATATTTAACTTGCATCCTCGCATTTATTTTCAGATTCTGTTTGTGTACAAACTTCCTTTAAAACATCTTCATGATCACACCTTTCCATAAGGTAGCTGCACTTGCTTTCTTAGATCCTTCATCAGGTCTTGTGTCAATTGTTATTGACCAAAATATTTAGGCCTGTTGGAAACAAGATTTTAAAAACTATTTTTCTTTTAGTTTTCAAAACTTGACTTAATTTTTTAAAATATAGGTACAAAATGAATAAGAAAACAAGAAACTTGGAGTTGTAAGTAGTGTTTGTAAGTTTATTTTTCAAAAACTAAAAGTAAAGGACCAAATGGTTATCAAATGGAGTTTTAGTAATTGGTTTGATTGATGTTAGTTTTTTATTCTCACCCTTTGGTTGGAGAAAATTTCTAGTGCTATGGTATTACATACTTCTTCAGGATTTGACATGTCAATAGATGATATACTTATTATTTTATAGGCTCCACACCTTTTTTAAATGTTCTTTTATGAAAAACAATGAATAGAGATTGTATGAACAAAAAATTCATAGTGTACTACCATAGACTATAATACTAAAAAATCTCCTTGTGTCTGTTTAGTTTTTGGTGAAGGGTTTGAATAGAAGGTAATGAAGAAAAAAGGTGGAAGTATCAAGTAGCTAATTCGTTTTTGTATTCTTTATTTCAGCCTCCTCGCATATGTCATGGAAAGACAAAAAGGAGATCGAGAGTAAGAAAATTGTTTCTCTGGGTGGAAAGGTATGAATGCGGCTATGGATATGCAGTCTATAGGCTCGATTTTTTACTATATCCTGAATGAATGTAATTTTCAAATCTTACAACTATTGCCTAGACCATCAATCTTTTTTCACCATGGTGCAGCCTCAAAAGAAACAAAGACTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCGTAAGATAGTTGACTTCCTTTATCATGTTTTTTTTTCTTTTTCTTTTTTTTTCACTCTTTTGGCTACATCCACTTCTGTGATTTGCAGCATTCGAATGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCTAGAAGATCTTTGGGGAAGAGGAAGCCGGAGGAGCAGGTTCTTAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTCAAGCATCTACTACGTTCAGCCTCTTCTAGGAATAGTAGTGGCCCTTCTAGGAATAGTGACCCTTTTAGGAATAGTGACTTTGGAAGTGAAATGGCCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATCATTCAATACTTGGAACATTCTTGTTTTACAACGAGAATATGGATATCCTTTCTTGCATATTTGTTGCAATTCAATGAAATTTTGCATCTCTTTGTTTC

mRNA sequence

ATGGATGTAGAGTTCCAGTTGGTAACACTTTTTGATAACCAAGCCGCACCGTCCGATCAGCACTGGCAGCTCTGTTTTTCTTTTCCTTCTATCTTAGCTTCCTCTGTATTGCCGTCGCAGATCGCCGTCACACCCCCACTGCCATTTTTCTTTCTCCTCTTCTTATCTCACGCTCTGCTGCAGCCTCACGCCGCCACGCCAACCCCGTCTTCTGCTGCAGCCATCCGTCAATTGTTTTTGCTTCGCAGTGACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACGGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCGCATATGTCATGGAAAGACAAAAAGGAGATCGAGAGTAAGAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAACAAAGACTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCCATTCGAATGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCTAGAAGATCTTTGGGGAAGAGGAAGCCGGAGGAGCAGGTTCTTAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTCAAGCATCTACTACGTTCAGCCTCTTCTAGGAATAGTAGTGGCCCTTCTAGGAATAGTGACCCTTTTAGGAATAGTGACTTTGGAAGTGAAATGGCCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATCATTCAATACTTGGAACATTCTTGTTTTACAACGAGAATATGGATATCCTTTCTTGCATATTTGTTGCAATTCAATGAAATTTTGCATCTCTTTGTTTC

Coding sequence (CDS)

ATGGATGTAGAGTTCCAGTTGGTAACACTTTTTGATAACCAAGCCGCACCGTCCGATCAGCACTGGCAGCTCTGTTTTTCTTTTCCTTCTATCTTAGCTTCCTCTGTATTGCCGTCGCAGATCGCCGTCACACCCCCACTGCCATTTTTCTTTCTCCTCTTCTTATCTCACGCTCTGCTGCAGCCTCACGCCGCCACGCCAACCCCGTCTTCTGCTGCAGCCATCCGTCAATTGTTTTTGCTTCGCAGTGACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACGGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCGCATATGTCATGGAAAGACAAAAAGGAGATCGAGAGTAAGAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAACAAAGACTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCCATTCGAATGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCTAGAAGATCTTTGGGGAAGAGGAAGCCGGAGGAGCAGGTTCTTAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTCAAGCATCTACTACGTTCAGCCTCTTCTAGGAATAGTAGTGGCCCTTCTAGGAATAGTGACCCTTTTAGGAATAGTGACTTTGGAAGTGAAATGGCCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAATAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGA

Protein sequence

MDVEFQLVTLFDNQAAPSDQHWQLCFSFPSILASSVLPSQIAVTPPLPFFFLLFLSHALLQPHAATPTPSSAAAIRQLFLLRSDKMHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKNNKSKKKGGGKKRH

Homology

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BLAST of CaUC02G048030 vs. NCBI nr
Match: XP_008449630.1 (PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 6.1e-82
Identity = 177/193 (91.71%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    HS+VRQFGGMASSSNSR+S GKR+PEEQ
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HSSVRQFGGMASSSNSRKSSGKRRPEEQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR +SSRN +GPSRNSDPFRN+DFG+EM GKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPSSSRN-NGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKN 180

Query: 266 NKSKKKGGGKKRH 279
           NKSKKKGGGKKRH
Sbjct: 181 NKSKKKGGGKKRH 188

[Close]

BLAST of CaUC02G048030 vs. NCBI nr
Match: XP_004140183.1 (uncharacterized protein LOC101203308 [Cucumis sativus] >XP_031743114.1 uncharacterized protein LOC101203308 [Cucumis sativus] >KGN48078.1 hypothetical protein Csa_003573 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 4.4e-80
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    HS+VRQFGGMASSSNSR+S GKR+PEEQ
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HSSVRQFGGMASSSNSRKSSGKRRPEEQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR +SSRN +G SRNSDPFRN+DFG+EM G GRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPSSSRN-NGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKN 180

Query: 266 NKSKKKGGGKKRH 279
           NKSKKKGGGKKRH
Sbjct: 181 NKSKKKGGGKKRH 188

[Close]

BLAST of CaUC02G048030 vs. NCBI nr
Match: XP_038900589.1 (uncharacterized protein LOC120087770 isoform X1 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 1.6e-77
Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSR+KRAK GSSR STDMET+MKMRNIKKEIEFLTSSHMSWKD+KEIES+KIVSLGGKP
Sbjct: 1   MHSRNKRAKVGSSRGSTDMETEMKMRNIKKEIEFLTSSHMSWKDRKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    HSNVRQFGGMA SSNSRRSLG+RKPEEQ
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HSNVRQFGGMAGSSNSRRSLGRRKPEEQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLL  ASSRN +GP+RNSDPFRN+DFG+EM  KGRRKGGKKK+
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLSPASSRN-NGPARNSDPFRNTDFGNEMGVKGRRKGGKKKS 180

Query: 266 NKSKKKGGGKKRH 279
            KSKKKGGGKKRH
Sbjct: 181 KKSKKKGGGKKRH 188

[Close]

BLAST of CaUC02G048030 vs. NCBI nr
Match: XP_022944773.1 (uncharacterized protein LOC111449125 [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-68
Identity = 159/193 (82.38%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    H NV QFGG ASS++SR SLGKRKPE Q
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HWNVSQFGGTASSNHSRNSLGKRKPENQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR A             P RNSDFG+EMAGKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPA-------------PSRNSDFGNEMAGKGRRKGGKKKN 176

Query: 266 NKSKKKGGGKKRH 279
           NKS KKGGGKKRH
Sbjct: 181 NKSNKKGGGKKRH 176

[Close]

BLAST of CaUC02G048030 vs. NCBI nr
Match: XP_022985670.1 (uncharacterized protein LOC111483659 [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-68
Identity = 158/193 (81.87%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPI+KKQKEREQKMVQE    H NV QFGGMASS++SR SLGKRKPE+Q
Sbjct: 61  QKKQRLPLSVARPIIKKQKEREQKMVQE----HWNVSQFGGMASSNHSRNSLGKRKPEKQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR A             P RNSD G+EMAGKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPA-------------PSRNSDIGNEMAGKGRRKGGKKKN 176

Query: 266 NKSKKKGGGKKRH 279
           NKS KKGGGKKRH
Sbjct: 181 NKSNKKGGGKKRH 176

[Close]

BLAST of CaUC02G048030 vs. ExPASy TrEMBL
Match: A0A1S3BNE0 (uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.0e-82
Identity = 177/193 (91.71%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    HS+VRQFGGMASSSNSR+S GKR+PEEQ
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HSSVRQFGGMASSSNSRKSSGKRRPEEQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR +SSRN +GPSRNSDPFRN+DFG+EM GKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPSSSRN-NGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKN 180

Query: 266 NKSKKKGGGKKRH 279
           NKSKKKGGGKKRH
Sbjct: 181 NKSKKKGGGKKRH 188

[Close]

BLAST of CaUC02G048030 vs. ExPASy TrEMBL
Match: A0A0A0KEY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.1e-80
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    HS+VRQFGGMASSSNSR+S GKR+PEEQ
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HSSVRQFGGMASSSNSRKSSGKRRPEEQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR +SSRN +G SRNSDPFRN+DFG+EM G GRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPSSSRN-NGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKN 180

Query: 266 NKSKKKGGGKKRH 279
           NKSKKKGGGKKRH
Sbjct: 181 NKSKKKGGGKKRH 188

[Close]

BLAST of CaUC02G048030 vs. ExPASy TrEMBL
Match: A0A6J1FZ06 (uncharacterized protein LOC111449125 OS=Cucurbita moschata OX=3662 GN=LOC111449125 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 8.4e-69
Identity = 159/193 (82.38%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPIMKKQKEREQKMVQE    H NV QFGG ASS++SR SLGKRKPE Q
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQE----HWNVSQFGGTASSNHSRNSLGKRKPENQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR A             P RNSDFG+EMAGKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPA-------------PSRNSDFGNEMAGKGRRKGGKKKN 176

Query: 266 NKSKKKGGGKKRH 279
           NKS KKGGGKKRH
Sbjct: 181 NKSNKKGGGKKRH 176

[Close]

BLAST of CaUC02G048030 vs. ExPASy TrEMBL
Match: A0A6J1JBZ2 (uncharacterized protein LOC111483659 OS=Cucurbita maxima OX=3661 GN=LOC111483659 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.9e-68
Identity = 158/193 (81.87%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIES+KIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QKKQRLPLSVARPI+KKQKEREQKMVQE    H NV QFGGMASS++SR SLGKRKPE+Q
Sbjct: 61  QKKQRLPLSVARPIIKKQKEREQKMVQE----HWNVSQFGGMASSNHSRNSLGKRKPEKQ 120

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSDPFRNSDFGSEMAGKGRRKGGKKKN 265
           VLKSSEGFFKHGVLDVKHLLR A             P RNSD G+EMAGKGRRKGGKKKN
Sbjct: 121 VLKSSEGFFKHGVLDVKHLLRPA-------------PSRNSDIGNEMAGKGRRKGGKKKN 176

Query: 266 NKSKKKGGGKKRH 279
           NKS KKGGGKKRH
Sbjct: 181 NKSNKKGGGKKRH 176

[Close]

BLAST of CaUC02G048030 vs. ExPASy TrEMBL
Match: A0A5A7V3A9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001320 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 4.5e-62
Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 122 SSHMSWKDKKEIESKKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNV 181
           SSHMSWKDKKEIES+KIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQE    HS+V
Sbjct: 20  SSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQE----HSSV 79

Query: 182 RQFGGMASSSNSRRSLGKRKPEEQVLKSSEGFFKHGVLDVKHLLRSASSRNSSGPSRNSD 241
            QFGGMASSSNSR+S GKR+PEEQVLKSSEGFFKHGVLDVKHLLR +SSRN SGPSRNSD
Sbjct: 80  GQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPSSSRN-SGPSRNSD 139

Query: 242 PFRNSDFGSEMAGKGRRKGGKKKNNKSKKKGGGKKRH 279
           PFRN+DFG+EM GKGRRKGGKKKNNKSKKKGGGKKRH
Sbjct: 140 PFRNTDFGNEMGGKGRRKGGKKKNNKSKKKGGGKKRH 171

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BLAST of CaUC02G048030 vs. TAIR 10
Match: AT2G44820.2 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-29
Identity = 95/198 (47.98%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           ++ R    K      ST ++  +  +NI K++    SSHM+WKDKK +E KK+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QK  RLPLSVAR  MKKQK+RE+KM+++    +  + +FGG  SSS  + +  KR PEE+
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQ----NVILGRFGGGGSSSR-KPAERKRTPEER 121

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNS------SGPSRNSDPFRNSDFGSEMAGKGRRK 265
           VLKS+ G FK GVLDVKHLLRS  S +S        PSR          G  +  KG++K
Sbjct: 122 VLKSTGGIFKGGVLDVKHLLRSGPSSSSDRDFKTKKPSRVEKNLGGGGDGGGIKSKGKKK 181

Query: 266 GGKKKNNKSKKKGGGKKR 278
           GGK K NK KKKGGGKKR
Sbjct: 182 GGKNK-NKGKKKGGGKKR 192

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BLAST of CaUC02G048030 vs. TAIR 10
Match: AT2G44820.1 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-29
Identity = 95/198 (47.98%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 86  MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESKKIVSLGGKP 145
           ++ R    K      ST ++  +  +NI K++    SSHM+WKDKK +E KK+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 146 QKKQRLPLSVARPIMKKQKEREQKMVQEVRKSHSNVRQFGGMASSSNSRRSLGKRKPEEQ 205
           QK  RLPLSVAR  MKKQK+RE+KM+++    +  + +FGG  SSS  + +  KR PEE+
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQ----NVILGRFGGGGSSSR-KPAERKRTPEER 121

Query: 206 VLKSSEGFFKHGVLDVKHLLRSASSRNS------SGPSRNSDPFRNSDFGSEMAGKGRRK 265
           VLKS+ G FK GVLDVKHLLRS  S +S        PSR          G  +  KG++K
Sbjct: 122 VLKSTGGIFKGGVLDVKHLLRSGPSSSSDRDFKTKKPSRVEKNLGGGGDGGGIKSKGKKK 181

Query: 266 GGKKKNNKSKKKGGGKKR 278
           GGK K NK KKKGGGKKR
Sbjct: 182 GGKNK-NKGKKKGGGKKR 192

The following BLAST results are available for this feature:

BLAST of CaUC02G048030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449630.1	6.1e-82	91.71	PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo]	[more]
XP_004140183.1	4.4e-80	90.67	uncharacterized protein LOC101203308 [Cucumis sativus] >XP_031743114.1 uncharact...	[more]
XP_038900589.1	1.6e-77	88.08	uncharacterized protein LOC120087770 isoform X1 [Benincasa hispida]	[more]
XP_022944773.1	1.7e-68	82.38	uncharacterized protein LOC111449125 [Cucurbita moschata]	[more]
XP_022985670.1	3.9e-68	81.87	uncharacterized protein LOC111483659 [Cucurbita maxima]	[more]

BLAST of CaUC02G048030 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G048030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNE0	3.0e-82	91.71	uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=...	[more]
A0A0A0KEY3	2.1e-80	90.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1	[more]
A0A6J1FZ06	8.4e-69	82.38	uncharacterized protein LOC111449125 OS=Cucurbita moschata OX=3662 GN=LOC1114491...	[more]
A0A6J1JBZ2	1.9e-68	81.87	uncharacterized protein LOC111483659 OS=Cucurbita maxima OX=3661 GN=LOC111483659...	[more]
A0A5A7V3A9	4.5e-62	89.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CaUC02G048030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44820.2	2.2e-29	47.98	unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bac...	[more]
AT2G44820.1	2.2e-29	47.98	unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 87..191 e-value: 4.8E-15 score: 56.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..105
None	No IPR available	PANTHER	PTHR28096	PROTEIN FAF1	coord: 66..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G048030.1	CaUC02G048030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus