CaUC02G045990 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G045990
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr02: 33699321 .. 33702703 (+)
RNA-Seq ExpressionCaUC02G045990
SyntenyCaUC02G045990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGATGTGTTTCCAAAGGTTTACACAACTCATATTTATAGTGTTACAATGGGGGAGACACCAAGTAAAAATTGTTTATAATAGGAGAGTTGGAGAGTCTAATTGCTAAAGAAAAGGAAGAACAAGTTCATGCAAAAACTAGGTAAATGATATGAAAATGTTAGAGATTTGTAAAATTAGGAATCCTACGATGAACCCTGAATAACAAATTCCCAAACCTCCAAGTCAATTGATGTAAATCAAAGGGAAGAATTAGAATTGGATTATCTTTTGATCGATGACCAAGAGATAAGGAGAAAAAGTTTCTTACTCCAAGTTCGAACACTCTACAAGTAAGATGATTTGACTTACCTAAATGTTCTTGGCATGCGACCCTGATTCATGAATTGCAAAAGAATGGTGATGAGGCTTTGTCATCTACCAGAGAATTTTTATTCAAGAAAACCCTAAATCTCAAACATCATATAATGTCATGTGACTTAGCTATCCCAAAATGTCTCACTAAACCTCCCCAGGCGCTTCTTTAACTAAAAACTCACCCAATAGAATAAGTGGGGATGAAAAACTTATTTTTCCTAAACAGAAACCATCAAACGTCATAAAATCAGGCACGACACGTTTTTGTATGAGATTTTCAACAATAGGTTCAAAATATGCTTCTTATGAATACAATGTCTTAATGTGTTCAAAACCAAGCAACCTAATATGAAGTGTGTTTAGCAAAACATACCTCTTAGATAGCACATTAGAAACTATATTTTTCTTACCTTTCTTATACCCTATCACATAGGGAAAAATTTCAATGAACTCTAACCATTATGCATGTCTTTGGTTCAGCCTGTATTGACCTTTCAAGTGTTGTAAGCTTTGGTAGTTAGTATGAATTACAAACTCCTTTAGCCACAAGTAGTGTTGCCATGTGTTGCAGTGCTCTCACCAAAGTTCTTGCTCATTGTCATATGTAGGATATTTCAAGGTGGCTCCATTCAAGTTCTCACTGAAGTACATCAAGGATCTTTGATCCTACATTAAAACAACTCTAATCCATATTCCACTAGCATTATACCCAATTTCAAATGTTAGTTCAAAATCAGGCAAGACAAGTAAAGGCCCATTACATAACTTATCTTTTAAATCGTTAAAAGCATGTTCTTGTGCTTGTCTTCACTCAAATTTTACATTTTTCTTTATAAGCTCATTAAGCAGTGCAACCTATAGATACCACCTAGTCCATGAAAGCTCCCAATCTCACCGGTATCTTAGGTGTAGGACACTCTCTAATTGCTTTCACCTTCTCAAAATTAACTTTCACTCCATGTTTAGACACTACAAAACTTAGAAAATTCAAAAACTACCCTTCTTAACTCAAAATCAAGCATTCTTCTTTTAATAAGAAATATCAATAAAGATCAAGGAGATAAAATCATTTAAGTAAAATTCAAGCAATTAGATACCAAATACCAAATATTATAACATATATACTAATTGATGAAAAACAAACTATGATACTAAAAACTTCAAGAATTCAAGAATATAAATAAATTTCATAAATACTCCCCCTATGAAAAGGAATTTAACAACTTTAAAAAAAACATGCTCAAAGATCAATTTCTCAATAAGGATAAACAACATGCTCCAAAAAAATTTTTAGTTAACAATGTGAACCATAGAATATGAATAACTCGTGCCATTAAGTATCTAAAAAAATCTAATCAATTTTAATCAAAATATGAACAACATATCTTAATCAGTAATGACAATATTAAGTAAGACTCGATATCATTTTCTTCCAAACTTTTCAAAAGAAAAACAATGATAGAGAAAACATCTAATTGACCAAAAAGCCACATAATAAGCAATATAGATAAATGTCAAATAAATAAATATCTCATACTTTTTCATCACATTAAATCAAATAAGAATGAAAAAAAATCAAATTCAAACTTGGTCAAATAGATATAATTTTCAAAGATACCAATAGAAATGCTTATCTCAAAAATTCATAAATGAAAGTTACCAAAATAAACTATTTCCTTTATTGAATTCAAACAAATTTTTGTTGTGTAGCTGCCAATTTGAATCAATTCCACAATTGAAGTCTATGCAACCATTTGCTTCTTAAATCACACCTACAAAGAAAGCTCAACCCAAAAGTTTTGGTGCCTATTTAGGTCATTTATTGTTAGTGAGTAAGAACTTTGGAATCCATTTAAGATTAATTCCAACATTATTAGGATTCGTTCTTGCCAAATAACAAGTATTAACTTTATAACCAATTTTACCACAATAATAACATATAAATTAGATAAATCACGGATATATGGTAACATTTTGTTATATTTGAAAATATTTTTAGCAGTTATGCCATTTAAAACAGTTATCTTTTATCGAAAGAGTTTAAATAAAAATGTATTTTTTGAAAAAAATATATTTTTTTCTTTAACCATAGTTTTGGTTGTACCTTCCTAATTATGGCCCAAAGAAGAAAGAAGTAACGAGAAAGGCCTTAGCCTTTAGGTCCACAAAACCCTCCAATCACAAAACAAAGGGGAAAGGGAGAAAAGCCGAAGGCTCAACGGAGACTTCTCACCGCTGCCATCACCGTCGCATGCCCACCTTCTTGCTTCATCGTTTAAATACAATACCAGTTCGAATCTCACACTTTTTCCTTCCCTCTCTCTTCTCAATTAGGGCACACAACCACGATCTTTGTTTCGGAACCGGACGTTTCTCCGATCTGCTTTTCAGGTTCTTCCTGTCTCTCTGATTTAATTTCTGATCCAGATTTACTCATTTCGTTTTTCCATGAATTCGATTCCCGATCTTCTGTTCCTTCTTCATCTATCAATGCCGTTCCAAGGGTTTCTGGATATACTTTCAAGTTCTTTTCGTTTCTTGTTTTACTCTCAAAGGATTTCTTTTCGTAATCTGCGTTTCGTTTAAAAGAATCAGTTCTGAAACACTACCACAGTTCTCGGTTCGATTACTTATTTCTTTTAAAATCTTGTTTGTTTACTTGAAGGCCTTGATTTTCTTATGGAGGTTTGAATTTTGTTTTACTTTTATTATCCTTTTTAGAAGCTGCCTAGACTAGAGTGACTGCGAGATTACCAAACCAAACCCAGTTCTAAAAACGACCTGAGAATTGTACGTCTATGAAGTATATATTTGTACTCGTTTTTCATGTTTTACGGACTCTGCAGCCGCATTGGGTTTAGTTTTGGTGTTTTTATCATACTTCTGAGCTTACTCTTACATTATACTATTATTTTTCAGGCTGGTATTTGATTAGCTATAAAGCTTGTCGAATAGTTTCTCTATCTTTTGGCTCCTCAAAGACTGGAACGGCTGTTTTCGACGAGGGAATGAAATTTGCATAG

mRNA sequence

ATGAAAGATGTCCACAAAACCCTCCAATCACAAAACAAAGGGGAAAGGGAGAAAAGCCGAAGGCTCAACGGAGACTTCTCACCGCTGCCATCACCGTCGCATGCCCACCTTCTTGCTTCATCGTTTAAATACAATACCAGCTGGTATTTGATTAGCTATAAAGCTTGTCGAATAGTTTCTCTATCTTTTGGCTCCTCAAAGACTGGAACGGCTGTTTTCGACGAGGGAATGAAATTTGCATAG

Coding sequence (CDS)

ATGAAAGATGTCCACAAAACCCTCCAATCACAAAACAAAGGGGAAAGGGAGAAAAGCCGAAGGCTCAACGGAGACTTCTCACCGCTGCCATCACCGTCGCATGCCCACCTTCTTGCTTCATCGTTTAAATACAATACCAGCTGGTATTTGATTAGCTATAAAGCTTGTCGAATAGTTTCTCTATCTTTTGGCTCCTCAAAGACTGGAACGGCTGTTTTCGACGAGGGAATGAAATTTGCATAG

Protein sequence

MKDVHKTLQSQNKGEREKSRRLNGDFSPLPSPSHAHLLASSFKYNTSWYLISYKACRIVSLSFGSSKTGTAVFDEGMKFA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G045990.1CaUC02G045990.1mRNA