CaUC02G043320 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G043320
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	multiprotein-bridging factor 1b
Location	Ciama_Chr02: 30912477 .. 30914871 (+)
RNA-Seq Expression	CaUC02G043320
Synteny	CaUC02G043320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCGCTTCAAGCTATCCAGACTTTTTTATATACTCCGACTAGAAACCCTAATCCAGATTCTGCGTATTATCGAGCGAGGAACATCTTCGAAAGGAGACAAGGAGACACGAAGAAAGTTGAAATGGCTGGAATCGGACCACTTTCACAGGATTGGGAACCGGTGGTCATCAGGAAGAAGGCACCCAACGCCGCCGCAAAGAAGGATGAGAAAGCGGTTAATGCCGCACGGCGAGCCGGGGCAGAGATTGAAACCATAAAGAAATGTGAGCTCTCTATCTTTAATCAATTATCCCTTTGATTTCCCTATTGAATAAAAACCCAGTCGCTGTTTTCTTGTTTTTGTTTTGACTCTCAACTCTACTTATCCGTAAATTGTTAACTGTTAAGCGCGGAGGTAATGGTAATCGAGTTTTTGGGTTGGAAAGATACAACCAAGTTTCATATTGGGAGGCCATTTAGATTGTTTTTTTCAACTGGGTATCACATTTTTTAATGGATCGAATGGGCAATGATCATTTGGGACTTGGTGTTGGCCCTTACAGGGTTGGGCTATGGGTATCTGTTTCAATTGCCTTAGATTCTGCTTATGTTTGTTCATAATTAGTCAGGAGTCTGTTTTATGCAGTGAAATTTAGTGTTGCAATGATACTTTTTATGCCTTTTGCAGCTGCTGCTGGGTCAAACAAATCAGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCGTGAGTACTTCTGGATTACATTCGCGCATAGCATGGTTGGATAAGGGCTTCTTTGTTTTTGTTTATCTCTGGTTTCAATCATCAGGGGATTCGTTGGTTTCATATCAGAGAAAGAGCATGCAAGCAGTGCATCACATGATATATTTACTATCTCAATTTCTTTTAGGATTTGTACTGCTTCATATTTCGCTTTAGTGTTATATTTTCTTAGAATGATCATTCGTTATTATTTTGTCAATTGGATGTTTTATTTTGATTCTAGATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAGCTTGCTCAGGTATGATTGTCCCACACTCTTTGTTGGCTTGTTCTCTATTATGTGCACGTGTTAATGATGACCTGGATTTACTTTTTTCTTCCCCTGTAGATTATTAATGAAAAGCCTCAAGTTATCCAGGAGTACGAGTCCGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTCGGAACAAAACTGCGTGGGAAGAAATAAAGAGATATGGAAAGTTAAGTATGAGTTCTGCATAAGCTTTTGTTTGAACCATGCGCAAAATTCATACCCTACCATGGTTTCAATGTGTAATTATATTCGACCACCCTCGTATGCCTGTATAACCACTGTTGCAGTGTCTTGGTAAGTTCTTACCTGGAAATAAATAAATACCATGTCTGTCATGTTGCGTTAGTTTCCAGATGTTTTGGCTGCACTCTTCACATCAGAAGTTAGTCGTTATTTGAATTAAATGGCTGCAGCCATGACAATTAACAATTCAGCAACTTGTATGGAGAGCGTTAGGGATGTTGTTTCCTAGTTGTTTCTGAACATTGTTTCTATTGTCGATGTCCATGATGCAATTTGAATGCTGTCAGTTTTTTCCCCTCTGAATTGGTTGCACCAAAGGTACAGGTTCTTTACTTTGGCCACTCTCTTGGAGATTGGAGTGACATAAATGTATGGCTTACTTTTTTCTTGGAAAGAACGTTTTTGCAAACTCAAAGCTATCAAATAGACTGAACTGCCTAGTAAATGTTGGTTTTGGGTCAGTATCTTATCTTCGCCTTGGCTGGAATGGGCCATGAAAAAGTGGCCACATCAAAACGTTCATGTGTCCAGTTTGGATTAGTTTGGACTGATCTGAAATTTGATAGCCCAACAATTTTTGTTCAGTAACCCCTTCCCTCTCTCGCCGAGTCTTCTGCCAATGCACCACACCCTGCTCTTCCCTTCCTCACTCTCTTCCCCCGCTGAAACTTTATCCAAGTTGAAGTAATTATAGTAGGTAAATTTTGCTGATCAGCAAATGGGGAAAGGATAGAGCATTGCCCTAAAATCTAACAAAAATGGTTCCTGTTCGATGAATGGAAACTGATCTTTTATTATGAAGTCTACCTTCTCCATCTCTCACTCCTGTTTCTTTGAACCCCCAGCTCCCTGTCTACCCACCGATTTAAGACTTCGTCCAAGTTCAAGCAATTGTGGCTATTTTAGCAGAACCGTACTAGGGAGAGAATCGAATGGCGTTAACCTGAAATATGGTTCTTGGTTAGATCAATGATAACTGATCCCTTCCTGGTATTGAAT

mRNA sequence

TGCGCTTCAAGCTATCCAGACTTTTTTATATACTCCGACTAGAAACCCTAATCCAGATTCTGCGTATTATCGAGCGAGGAACATCTTCGAAAGGAGACAAGGAGACACGAAGAAAGTTGAAATGGCTGGAATCGGACCACTTTCACAGGATTGGGAACCGGTGGTCATCAGGAAGAAGGCACCCAACGCCGCCGCAAAGAAGGATGAGAAAGCGGTTAATGCCGCACGGCGAGCCGGGGCAGAGATTGAAACCATAAAGAAATCTGCTGCTGGGTCAAACAAATCAGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAGCTTGCTCAGATTATTAATGAAAAGCCTCAAGTTATCCAGGAGTACGAGTCCGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTCGGAACAAAACTGCGTGGGAAGAAATAAAGAGATATGGAAAGTTAAGTATGAGTTCTGCATAAGCTTTTGTTTGAACCATGCGCAAAATTCATACCCTACCATGGTTTCAATGTGTAATTATATTCGACCACCCTCGTATGCCTGTATAACCACTGTTGCAGTGTCTTGGTAAGTTCTTACCTGGAAATAAATAAATACCATGTCTGTCATGTTGCGTTAGTTTCCAGATGTTTTGGCTGCACTCTTCACATCAGAAGTTAGTCGTTATTTGAATTAAATGGCTGCAGCCATGACAATTAACAATTCAGCAACTTGTATGGAGAGCGTTAGGGATGTTGTTTCCTAGTTGTTTCTGAACATTGTTTCTATTGTCGATGTCCATGATGCAATTTGAATGCTGTCAGTTTTTTCCCCTCTGAATTGGTTGCACCAAAGGTACAGGTTCTTTACTTTGGCCACTCTCTTGGAGATTGGAGTGACATAAATGTATGGCTTACTTTTTTCTTGGAAAGAACGTTTTTGCAAACTCAAAGCTATCAAATAGACTGAACTGCCTAGTAAATGTTGGTTTTGGGTCAGTATCTTATCTTCGCCTTGGCTGGAATGGGCCATGAAAAAGTGGCCACATCAAAACGTTCATGTGTCCAGTTTGGATTAGTTTGGACTGATCTGAAATTTGATAGCCCAACAATTTTTGTTCAGTAACCCCTTCCCTCTCTCGCCGAGTCTTCTGCCAATGCACCACACCCTGCTCTTCCCTTCCTCACTCTCTTCCCCCGCTGAAACTTTATCCAAGTTGAAGTAATTATAGTAGGTAAATTTTGCTGATCAGCAAATGGGGAAAGGATAGAGCATTGCCCTAAAATCTAACAAAAATGGTTCCTGTTCGATGAATGGAAACTGATCTTTTATTATGAAGTCTACCTTCTCCATCTCTCACTCCTGTTTCTTTGAACCCCCAGCTCCCTGTCTACCCACCGATTTAAGACTTCGTCCAAGTTCAAGCAATTGTGGCTATTTTAGCAGAACCGTACTAGGGAGAGAATCGAATGGCGTTAACCTGAAATATGGTTCTTGGTTAGATCAATGATAACTGATCCCTTCCTGGTATTGAAT

Coding sequence (CDS)

ATGGCTGGAATCGGACCACTTTCACAGGATTGGGAACCGGTGGTCATCAGGAAGAAGGCACCCAACGCCGCCGCAAAGAAGGATGAGAAAGCGGTTAATGCCGCACGGCGAGCCGGGGCAGAGATTGAAACCATAAAGAAATCTGCTGCTGGGTCAAACAAATCAGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACACAGTCTCAGCTTGCTCAGATTATTAATGAAAAGCCTCAAGTTATCCAGGAGTACGAGTCCGGAAAAGCTATTCCAAATCAACAAATAATAACCAAACTTGAGAGAGCTCTCGGAACAAAACTGCGTGGGAAGAAATAA

Protein sequence

MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQIITKLERALGTKLRGKK

Homology

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BLAST of CaUC02G043320 vs. NCBI nr
Match: XP_008448251.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa] >TYK04879.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. NCBI nr
Match: XP_004149278.1 (multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical protein Csa_020917 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. NCBI nr
Match: XP_038902723.1 (multiprotein-bridging factor 1b-like [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 6.6e-64
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIMHAR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARMEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. NCBI nr
Match: XP_022149711.1 (multiprotein-bridging factor 1b-like [Momordica charantia])

HSP 1 Score: 250.4 bits (638), Expect = 9.5e-63
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIM ARTEKKLTQSQLAQ+INEKPQVIQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. NCBI nr
Match: XP_022943574.1 (multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotein-bridging factor 1b [Cucurbita maxima] >XP_023513396.1 multiprotein-bridging factor 1b [Cucurbita pepo subsp. pepo] >KAG6570527.1 Multiprotein-bridging factor 1b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010384.1 Multiprotein-bridging factor 1b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPL+QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.5e-58
Identity = 119/142 (83.80%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGP++QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA +INEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-56
Identity = 116/142 (81.69%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGP++QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQIINEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29
Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 5   GPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I  AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot
Match: Q5ZMC0 (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSSTSLNTRKLD 69
           DW+ V V+RKK P+AA  K ++AV AA+R G ++ET KK AAG NK      + NT KLD
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I   R  K +TQ  LA  INEKPQVI +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMG 124

Query: 130 KLERALGTKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot
Match: Q3T0V7 (Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSSTSLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G ++ET KK AAG NK    S + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLD 64

Query: 70  EETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRV  E+ K I   R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLG 124

Query: 130 KLERALGTKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL
Match: A0A5A7V8Z5 (Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00720 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL
Match: A0A1S3BIN6 (multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL
Match: A0A0A0KGV6 (HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G157120 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           +LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  TLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL
Match: A0A6J1D976 (multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018072 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.6e-63
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPLSQDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLSHDRVPTELKKAIM ARTEKKLTQSQLAQ+INEKPQVIQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL
Match: A0A6J1JEZ7 (multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGPL+QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-59
Identity = 119/142 (83.80%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGP++QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA +INEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-58
Identity = 116/142 (81.69%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60
           MAGIGP++QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKA 120
           SLNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQIINEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of CaUC02G043320 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 131.0 bits (328), Expect = 7.8e-31
Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 5   GPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQIINEKPQVIQEYESGKAIP 124
           NT+KL+EETE  + DRV  E++  I  AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of CaUC02G043320 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-11
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 5  GPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST--SL 64
          G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK  AGSNK   S+    +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65 NTRKLDEETENLSHDRVPTELKKAIMHAR 92
          NT+KL+EETE  + DRV  E++  +   R
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of CaUC02G043320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448251.1	1.3e-64	98.59	PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multipro...	[more]
XP_004149278.1	2.9e-64	97.89	multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical prote...	[more]
XP_038902723.1	6.6e-64	97.89	multiprotein-bridging factor 1b-like [Benincasa hispida]	[more]
XP_022149711.1	9.5e-63	95.77	multiprotein-bridging factor 1b-like [Momordica charantia]	[more]
XP_022943574.1	2.1e-62	95.07	multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotei...	[more]

BLAST of CaUC02G043320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXT3	2.5e-58	83.80	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	1.4e-56	81.69	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q9LV58	1.1e-29	51.80	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q5ZMC0	1.2e-28	57.14	Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN...	[more]
Q3T0V7	1.6e-28	57.14	Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 ...	[more]

BLAST of CaUC02G043320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8Z5	6.4e-65	98.59	Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BIN6	6.4e-65	98.59	multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=...	[more]
A0A0A0KGV6	1.4e-64	97.89	HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G15...	[more]
A0A6J1D976	4.6e-63	95.77	multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1JEZ7	1.0e-62	95.07	multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4...	[more]

BLAST of CaUC02G043320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58680.1	1.8e-59	83.80	multiprotein bridging factor 1B	[more]
AT2G42680.1	9.8e-58	81.69	multiprotein bridging factor 1A	[more]
AT3G24500.1	7.8e-31	51.80	multiprotein bridging factor 1C	[more]
AT3G24500.2	5.3e-11	44.94	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 86..141 e-value: 4.0E-11 score: 53.0
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 87..138 e-value: 9.5E-13 score: 48.0
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 87..141 score: 12.488455
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 85..138 e-value: 1.8266E-9 score: 48.7034
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..142 e-value: 2.7E-29 score: 102.5
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 80..138
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 9..79 e-value: 7.5E-24 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..80
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..142
None	No IPR available	PANTHER	PTHR10245:SF118	MULTIPROTEIN BRIDGING FACTOR 1B	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G043320.1	CaUC02G043320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding