CaUC02G042690 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCGACGGCATCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGACGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGATGATGATGACGACACTCCTATTCTGTTTGCCAGGAATTGAATTCGATCCTTCCTTCTTCTTCTTTTTCTTTAATGTTTCCGACAATTTTCCAGCCCTAGGTGTTGAATAATTGTGAACCAGATGAGATGATTTATTACTGTGATTTTTATTTTTATTTTTATTTTTTTGAGTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG ATGGCCGCCGACGGCATCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGACGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGATGATGATGACGACACTCCTATTCTTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG ATGGCCGCCGACGGCATCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGACGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGATGATGATGACGACACTCCTATTCTTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG MAADGILRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRSWSEGCLTLVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILFCDLKNNIGSVLVSESCYFHLAIK Homology
BLAST of CaUC02G042690 vs. NCBI nr
Match: XP_038889376.1 (uncharacterized protein LOC120079294 [Benincasa hispida]) HSP 1 Score: 214.5 bits (545), Expect = 5.2e-52 Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CaUC02G042690 vs. NCBI nr
Match: XP_016901708.1 (PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo]) HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49 Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of CaUC02G042690 vs. NCBI nr
Match: XP_022938303.1 (uncharacterized protein LOC111444438 [Cucurbita moschata]) HSP 1 Score: 191.0 bits (484), Expect = 6.1e-45 Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CaUC02G042690 vs. NCBI nr
Match: KAG7021199.1 (hypothetical protein SDJN02_17887, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44 Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of CaUC02G042690 vs. NCBI nr
Match: XP_022999015.1 (uncharacterized protein LOC111493529 [Cucurbita maxima]) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of CaUC02G042690 vs. ExPASy TrEMBL
Match: A0A1S4E0F4 (uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.4e-49 Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of CaUC02G042690 vs. ExPASy TrEMBL
Match: A0A0A0LI78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47 Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of CaUC02G042690 vs. ExPASy TrEMBL
Match: A0A6J1FII0 (uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC111444438 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.0e-45 Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of CaUC02G042690 vs. ExPASy TrEMBL
Match: A0A6J1KE46 (uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.7e-45 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of CaUC02G042690 vs. ExPASy TrEMBL
Match: A0A6J1G546 (uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC111450804 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 6.2e-43 Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 0
BLAST of CaUC02G042690 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19 Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of CaUC02G042690 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17 Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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