CaUC02G041060 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G041060
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Lipoxygenase
Location	Ciama_Chr02: 28239604 .. 28243299 (+)
RNA-Seq Expression	CaUC02G041060
Synteny	CaUC02G041060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTCTGTTTCTTTCGAGCCAAATGCAGTGCAGAGATAGGCAGCGATGAGATTGCTCCAAAGGACTCTAGCTTTAGTGTTCATTTTGAGGTATTTCCATTCCTCAATCGATCAGGATGTGTAGTGACTGTGGAAAGCCATTGAAAGAAGAAAAGCTGCAATTAATAAAGAAACGTTCCACCGTTTCTGTATTGCATCTACATAAAACACACCAACATGAGTTAAAAGGCTTGAGTAATCCACCTTGATACCGGAAATGGTAGACTCCTGGACATTGATTTTAAAGCCAGAGGCTTCCTCGAAGACATTAATGATATGTTTGAGGTTCTCCAACTTTGTAATCCCTTTGGATCATACTTGCTAATATATCCTTCCACGTATATGTAAATTGGATCATACTTGCTCACACATCTATCTCTTTAGATTAATATATCCTTTCGACATATATATCTAAATTGGAAGGTTCAATATTGAAATTAAGGATTAATTAATATCTTCCATATATCCTTAATAAATACACATGAAATATAAAAAATCGCATATATAAATTAATCTAAATATGAACACCGATAATAAGTTCTATAATTTATCCTTGAAAAGTAAAAAAGAAAAAATATAGTTACTAATTTGTATAATTTCTTTTAAAAACATTGGTACAAAATGAATAACAAAACAAAATTGTTTTATAAGTTGCATGCATATAAAGTAGTGTTTATAAGCTTAAATTTCAAACACCAAATATAAAAAAAATTAAATAATATTGAAACTGGGGAAAATAAATCATTTACAATATACATGTGTTAAAAAAAGAGATAAATATGAAAATATTTTGACCTAAAGGATCATTTTGCAAATGAAAACAATGCAAAACAAAGTTACTAGTGAAAGTTTCCTAATCATGCAAAGGCGGTTGGGGACGACCAAAGATAGCCCACACGCATAATAGTTCTTGTTTTCTCTTCAGTAATAACTTTTCAGGTTTAATTTTCACACGTAAATAACATTATTTTTGCTATAAATACCTGACGAAATTCACATCTTCAAACCATCCATTCTTCATTTAGTAGAAAGAGAGAAAAGAAAATGATTGGGAAGATTCTAGAGGATGCCTTTAAAACCACCGGCAACGCCCTTAGAACGATTGGGGACGTTGCCGGGTTCGTTATAAATGCTAGAGGGAGCTTTATGGACCGTGCTAGCGATATCGTTCGAATCGGGAAGAAAAAGATCTAAGGGAAAGTGATTCTGATGAGAAGCAATGTCTTAGACTTCACTCAGCTTCATTCTATTGTTCTTGATGGTTTCACTGAGCTGTTGGGCAGTGGAATTGTACTGCAACTTGTGAGTGCTTCTGAGGTTGATAGCCATTGTAAGTTTTTCTTTTTAATAAATTTACTATTATTATTATTATTATTATTAAGGACAATGAACCTCCACCTATTTTCATAATGATATGATATAGTGTTCACTTTGGGCATAAACCCTTGTGCCTTTGCTTTAGGAATATAATCACCCAACATATTTGATACCAATGGATATACTTGTCCTTAATTATACTCATGATCACTTCCTTCTCTTAACCAAATGTGGGATATATTGTTTAGACTCTTAACAATGCCCCCCTCGAACAAAGTACCATCTTAACAATGTACTTAATTATAGTCATGATCACCTACAGAAGTTTTCTCTTATCATGGCCTAATTGTAAAGCTAGATAGAGCACAATCATGATTCATTTTTATATATACTTGGTATAACCACATGTTATTGGACCATTAATCTCCTCCCTTCGAACAAAGATCTACACCTCTACCAATGAATTTGATAGAATCCTTATTTGTTTGCCGCTTCAAGTATTTTTTGTCTTCATCCAGTACAAGACTCACTACTTTTGTTTGAAATCACTGAAAATCTCACCCACACAACTAGATTTAAACCATGACACTGATGCCAATTGATAAGGACTATGAAAACCTCTACCTATTTGCACAATGGTATACTATTCTATTGTCCACATTGGGCATAAACCTGACTTTGCTTTGGGACCACCTAAAAAACTTCATACCAATGAAGATAATTGCTTGTTCTAAAAAAAAAAAAAAAGATAATTGTCGTCAATTAAATACCCATGACTACTTCTTTCTTTACATGTGTGGGACATTTTTTACATTCCTAAAAATTATTATTATTATTATTATTATTATTGGCTAAACTATTAATAATAATCCTGAACTATGGAAGTTGGTTTCAATTATATTCTTGAACTTTTATAATTTTCATTTTAACTGTTGAAGTTTGATTTATTATTATTCTTTTCTTTTCAAGAAAACAATTGAAGGCTTTTGTGGACACTAAATTCATCAATGAAAAAAATTGTGTCTACAAATGTGCTCAAGTGAATAAATTGAAACGCATACAATATGAAATAAGTAAATTTTGGATGTAGAGTTAGTGGAAAAATCATAAAAGAAAGAACTTAAAAATGTAGTCGTGAGGTTGAAAGAAAGAAGATGACAATAGACATAGCTAACATATGCATCATGTGTTTTTTTTTTTTTTTATTTTCTTTTTCATGCATTTAGATTTATGTTCTTAAGCATGTTCAAATTTTTCCATCTATGAATTTAACATCGGAAGTCAAGAGTTATTTTTTCAAATAAACTTCAAACTTCAAAGGTTAATTATAATGAAAATTTTAAAAGTTTGATGATATAATTGAAATTAGACCAACTCCATAATCTATATTTTTTGCCATTAATTGTTAATTGTTATATTGTTTTGTTGAGTTTTGTTGAATTTTATTGAGTGCTTTCTCTTTTTGTTAGAGTGTTGGTATCATATTAAATTTATCATAATTTGTTGCATGTTTTTTACACCGGTCATGTAATATTGCAAATATATAGTGTCAAGTTTTTATATAGTACGGATTGAATTCGAGTGTTGTCTATTTGGGATTGGGCCATTAATTAAGCTTTAAAAATGAATCATTTAATTAGCACTACTTCTACTCCTAACTAGGTGGAGACAAAACAATTGGCGAAATGACTTAGAAAAGTGATTTTATGTATTGGAATAATAAACTCAACCAATTAATATACTACTTGTATATCATGCAACATAATCAACATAATTAACATTCTACTCAACCATGCAATAATTAACAATATTAATATTTTGCTAAAATCTAACAAAAAAAAAAAAAATCCTAAAAAAAATTTACAAATAAAAGAGGAAGAAAGATCTCCTAACACGTGTTGCGTTCTTTCTCATTATGAGCTCCACGATCTCGAGTTTCAAATCTCTTCTCCAGTTGATCTCAAGGGATGTCTCTCTTTAGGTTTCTTCAATGTGCAGAAAAATTCCAATTTTAGGTTAATTTTCATTCTCTCCAATTGGCTGTCTTCCTATGGAATGATGTGAATGATTCTATTTATAAGAGAGGATTTCTTTCTAAATCTAAATCAAATTAAGTTTCCTTAAACACTTTAGAATCTTTAGTTGACTTAGATTAACTCCCCCTTTTTGAAATAGGAGTTTACAATCTGATCTCTTGAGCTAAATTATGGAAAAAGGCGAGCTACATATTTGGAGAGGTGGCTGACTTATGCCCAGCGGTGTTTGCTGGAGAGTCAGTGTTTGAAGTCAACTTTGAATGTGAAGATGAATTTGGATATCCAGGAGCTTTCTATATAA

mRNA sequence

ATGTTCTTCTGTTTCTTTCGAGCCAAATGCAGTGCAGAGATAGGCAGCGATGAGATTGCTCCAAAGGACTCTAGCTTTAGTGTTCATTTTGAGGTATTTCCATTCCTCAATCGATCAGGATTAATCCACCTTGATACCGGAAATGGTAGACTCCTGGACATTGATTTTAAAGCCAGAGGCTTCCTCGAAGACATTAATGATATGTTTGAGGATGCCTTTAAAACCACCGGCAACGCCCTTAGAACGATTGGGGACGTTGCCGGGTTCGTTATAAATGCTAGAGGGAGCTTTATGGACCGGAAAGTGATTCTGATGAGAAGCAATGTCTTAGACTTCACTCAGCTTCATTCTATTGTTCTTGATGGTTTCACTGAGCTGTTGGGCAGTGGAATTGTACTGCAACTTGTGAGTGCTTCTGAGCTAAATTATGGAAAAAGGCGAGCTACATATTTGGAGAGGTGGCTGACTTATGCCCAGCGGTGTTTGCTGGAGAGTCAGTGTTTGAAGTCAACTTTGAATGTGAAGATGAATTTGGATATCCAGGAGCTTTCTATATAA

Coding sequence (CDS)

ATGTTCTTCTGTTTCTTTCGAGCCAAATGCAGTGCAGAGATAGGCAGCGATGAGATTGCTCCAAAGGACTCTAGCTTTAGTGTTCATTTTGAGGTATTTCCATTCCTCAATCGATCAGGATTAATCCACCTTGATACCGGAAATGGTAGACTCCTGGACATTGATTTTAAAGCCAGAGGCTTCCTCGAAGACATTAATGATATGTTTGAGGATGCCTTTAAAACCACCGGCAACGCCCTTAGAACGATTGGGGACGTTGCCGGGTTCGTTATAAATGCTAGAGGGAGCTTTATGGACCGGAAAGTGATTCTGATGAGAAGCAATGTCTTAGACTTCACTCAGCTTCATTCTATTGTTCTTGATGGTTTCACTGAGCTGTTGGGCAGTGGAATTGTACTGCAACTTGTGAGTGCTTCTGAGCTAAATTATGGAAAAAGGCGAGCTACATATTTGGAGAGGTGGCTGACTTATGCCCAGCGGTGTTTGCTGGAGAGTCAGTGTTTGAAGTCAACTTTGAATGTGAAGATGAATTTGGATATCCAGGAGCTTTCTATATAA

Protein sequence

MFFCFFRAKCSAEIGSDEIAPKDSSFSVHFEVFPFLNRSGLIHLDTGNGRLLDIDFKARGFLEDINDMFEDAFKTTGNALRTIGDVAGFVINARGSFMDRKVILMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSASELNYGKRRATYLERWLTYAQRCLLESQCLKSTLNVKMNLDIQELSI

Homology

[Close]

BLAST of CaUC02G041060 vs. NCBI nr
Match: XP_038890817.1 (probable linoleate 9S-lipoxygenase 5 [Benincasa hispida])

HSP 1 Score: 112.1 bits (279), Expect = 5.2e-21
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG VINA G+F+DR              K+I+MR+NVLDFT+ H
Sbjct: 8   DALKTTGDALRTTGDVAGSVINAGGNFIDRASDIGRLGKKKIKGKMIMMRNNVLDFTEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+E++       GK  R  YLERWLT
Sbjct: 68  SSVLDGFTELLGSGIVLQLVSATEVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. NCBI nr
Match: XP_022946174.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-20
Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGRIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTELLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. NCBI nr
Match: XP_022999017.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-20
Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGWIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTELLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. NCBI nr
Match: XP_023545238.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-20
Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGRIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTELLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. NCBI nr
Match: KAG6599220.1 (putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 64/107 (59.81%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGRIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTE+LGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTEVLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. ExPASy Swiss-Prot
Match: P38416 (Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum OX=4081 GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-05
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 101 KVILMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSASELNY----GK-RRATYLERWL 157
           +VILM+ NVLDF  + + V+DG ++LLG  + +QL+S S +NY    GK     YLE WL
Sbjct: 22  RVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGS-VNYDGLEGKLSNPAYLESWL 81

[Close]

BLAST of CaUC02G041060 vs. ExPASy Swiss-Prot
Match: P29250 (Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 5.5e-05
Identity = 28/80 (35.00%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 83  IGDVAGFVINARGSFMDRKVILMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSAS--E 142
           +G + G +   + + +   ++LMR N LD     + V+DG +E LG G+  QLVS+S  +
Sbjct: 2   LGGIIGGLTGNKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLVD 61

Query: 143 LNYGKR----RATYLERWLT 157
            N G R        LE+WLT
Sbjct: 62  PNNGNRGRVGTEASLEQWLT 81

[Close]

BLAST of CaUC02G041060 vs. ExPASy Swiss-Prot
Match: Q43191 (Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05
Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 102 VILMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSASELNYG------KRRATYLERWL 157
           ++LM+ NVLDF  +++ +LDG  E LG  + LQL+S    + G      +    YLE+WL
Sbjct: 25  IVLMKKNVLDFNDVNASLLDGVLEFLGKRVSLQLISVVHADPGNSLQGKRSNPAYLEKWL 84

[Close]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL
Match: A0A6J1K9N0 (Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493533 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGWIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTELLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL
Match: A0A6J1G320 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450336 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA KTTG+ALRT GDVAG V+NA G+ +DR              KVILMRSNVLDF + H
Sbjct: 8   DALKTTGDALRTTGDVAGSVVNAGGNVIDRATDIGRIGNRKIKGKVILMRSNVLDFNEFH 67

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S VLDGFTELLGSGIVLQLVSA+ ++       GK  R  YLERWLT
Sbjct: 68  STVLDGFTELLGSGIVLQLVSATHVDRHSNDPRGKVGRRAYLERWLT 114

[Close]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL
Match: A0A6J1G324 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450335 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.2e-20
Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 67  DMFEDAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDF 126
           ++  DA KTTG+ LRT GDVAG V+NA G+ +DR              KVILMRSNVLDF
Sbjct: 7   NLIGDALKTTGDVLRTTGDVAGSVVNAGGNIVDRATDIGRIGKKKIKGKVILMRSNVLDF 66

Query: 127 TQLHSIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           T+LHS VLDG TELLGSGIVL+LVSA+ ++       GK  R  YLERWLT
Sbjct: 67  TELHSSVLDGVTELLGSGIVLELVSATHVDRHSNDPRGKVGRRAYLERWLT 117

[Close]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL
Match: A0A6J1G308 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450334 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.2e-20
Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 67  DMFEDAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDF 126
           ++  DA KTTG+ LRT GDVAG V+NA G+ +DR              KVILMRSNVLDF
Sbjct: 7   NLIGDALKTTGDVLRTTGDVAGSVVNAGGNIVDRATDIGRIGKKKIKGKVILMRSNVLDF 66

Query: 127 TQLHSIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           T+LHS VLDG TELLGSGIVL+LVSA+ ++       GK  R  YLERWLT
Sbjct: 67  TELHSSVLDGVTELLGSGIVLELVSATHVDRHSNDPRGKVGRRAYLERWLT 117

[Close]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL
Match: A0A1S4E045 (probable linoleate 9S-lipoxygenase 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494845 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.1e-19
Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 71  DAFKTTGNALRTIGDVAGFVINARGSFMDR--------------KVILMRSNVLDFTQLH 130
           DA K TGN LRT GDVAG ++NA G+F+DR              KVIL+RSNVL+ T+ H
Sbjct: 9   DALKITGNVLRTTGDVAGSIVNAGGNFIDRASDIGQLGKKKIKGKVILIRSNVLNITEFH 68

Query: 131 SIVLDGFTELLGSGIVLQLVSASELN------YGK-RRATYLERWLT 157
           S +LDGFTELLGSGIV+QLVSA+E++       GK  R  YLE+WLT
Sbjct: 69  SSILDGFTELLGSGIVMQLVSATEIDSHSNERQGKVGRRAYLEKWLT 115

[Close]

BLAST of CaUC02G041060 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 41.6 bits (96), Expect = 8.1e-04
Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 102 VILMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSA--SELNYGKR----RATYLERWL 157
           V+LM+ NVLDF   ++  LD   E LG+ I L+LVS+  ++   G +    +A +LE W+
Sbjct: 25  VVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHLEDWI 84

The following BLAST results are available for this feature:

BLAST of CaUC02G041060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890817.1	5.2e-21	61.68	probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]	[more]
XP_022946174.1	5.8e-20	60.75	probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]	[more]
XP_022999017.1	5.8e-20	60.75	probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]	[more]
XP_023545238.1	5.8e-20	60.75	probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]	[more]
KAG6599220.1	1.3e-19	59.81	putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of CaUC02G041060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38416	3.2e-05	47.54	Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum OX=4081 GN=LOX1.2 PE=2 SV=1	[more]
P29250	5.5e-05	35.00	Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOX1.1 P...	[more]
Q43191	9.3e-05	39.34	Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2...	[more]

BLAST of CaUC02G041060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9N0	2.8e-20	60.75	Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493533 PE=3 SV=1	[more]
A0A6J1G320	2.8e-20	60.75	Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450336 PE=3 SV=1	[more]
A0A6J1G324	8.2e-20	57.66	Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450335 PE=3 SV=1	[more]
A0A6J1G308	8.2e-20	57.66	Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450334 PE=3 SV=1	[more]
A0A1S4E045	3.1e-19	56.07	probable linoleate 9S-lipoxygenase 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CaUC02G041060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55020.1	8.1e-04	39.34	lipoxygenase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 100..182 e-value: 1.3E-7 score: 33.5
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 100..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G041060.1	CaUC02G041060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding