CaUC02G038440 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G038440
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Ciama_Chr02: 24992826 .. 24994389 (+)
RNA-Seq Expression	CaUC02G038440
Synteny	CaUC02G038440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCAACGCCTCCCCACTTCTTTAAAGTTCTTTCTCACACACTCACTCTACAAAAGCTTGTAAGTCAAATATCTTCTACTTTAACTTCTTATATTATTTTTCTTATGGAAATAACTTGTTGTAAACAAACCTGACTCCCCTTCTTTTATGGCCTTCAAGTTTTTTAAGCTCTTTGAATTGAACCCCTCAACATTAAGCAATATTTTCCCTAGATTTAAGCTTTTTTTTTTTTTTTTCCGTATTTCAGGAAGTTCCAACGAAATTTGTGAGACTACATGGAGAAACTCTGCAATCTGAGGAGGTTTGCCTTAAAGTAGTGAATGGGGTAAAATGGAAAATAGGATTAGAAAAAAGCAACCAAAAAGTTTGGTTAGAAAAAGGATGGGCAGAGTTTGTAAAGTTTTATTCTATTGATATTAATTTTTTTGTAGTATTCCAATATAACGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTCAATATCCAAGTGCTTCTAGAGAACTTAACAAAAACATATCTGAACATAGGGAGAGAGAAGAAAATGGATGTTTCCAAATATTGGGTAACAACCAGAGATCAAAAAAGGAAGATAAAACTCAAATTTTGCATTCACCAACTCCTAAGACCATGAAAACAAGTGATCAAGCAGGTGGGAGTAAAGTGATTTCCAAAAAAGTGGAGCTGAAGAAAGATCACTTTCACTCTTCTGATCAATTGAACATAGGTACATGTTTTTATTTTTTTATTATATTTTCATGAAATTATAAAAATGTAAAAGCCTAGGGTTGCCACACTAACCTTCATTTAAAACACATGTTTCATCTCAAAACCAATTGACAATAATAGAAAAAGTAGTCCATGTATGGTATAAAAATTATAAGCTCTTTCCAAAAATTTCAATTTAATCATTCACCTTGACATTATTTTTATATATATTTTAGTCTTTATTGTTAATTTTAATTAATTGAGTATTTTATGTATATGGAGCAATTTATCTTTTAAACCTTTTAATGCCAGATTTGAAACCAAACCAATTGAGAAATAAAGTGAAGTGTTTGAAGAAGAAGCCATCAATTGCAACCAAAGAAGCAAGAATAAATAATGAGAAAGCTTCAGAATTCAAATCACTAACCAAAGTTCCTTCTTTTATGGTTACAATAGGAACTTCATACCTTGATACAGGCAGAGGTTATTTGGTAAGATAATCTATCATACTTTTTATTATTTACCTTTAAAAAATCACTCTCAAACATACTCTTCGTTAATGATTATTGACTATGCAGTGTATTCCATTAGCTTTTGGAAATACTCACTTGAAGAACACCAAAGAATTCAATCTTCAAGTTTCAAATGGAGATTCTTGGAAGGTTACGTGTGTTGAACGTTGGTATTCTAATATACAGAGATTTGAAATGGGAAATGGTTGGAGGGCATTTGCAAGAGATAATAACTTGAAAGAAGGTGATATTTGTGTTTTTGAGTTGATAAAAAACACTCAAATATCATTTAAAGCTACCATTTTCCGATTGGGTATTTAA

mRNA sequence

ATGGCTTCCTCAACGCCTCCCCACTTCTTTAAAGTTCTTTCTCACACACTCACTCTACAAAAGCTTGAAGTTCCAACGAAATTTGTGAGACTACATGGAGAAACTCTGCAATCTGAGGAGGTTTGCCTTAAAGTAGTGAATGGGGTAAAATGGAAAATAGGATTAGAAAAAAGCAACCAAAAAGTTTGGTTAGAAAAAGGATGGGCAGAGTTTGTAAAGTTTTATTCTATTGATATTAATTTTTTTGTAGTATTCCAATATAACGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTCAATATCCAAGTGCTTCTAGAGAACTTAACAAAAACATATCTGAACATAGGGAGAGAGAAGAAAATGGATGTTTCCAAATATTGGGTAACAACCAGAGATCAAAAAAGGAAGATAAAACTCAAATTTTGCATTCACCAACTCCTAAGACCATGAAAACAAGTGATCAAGCAGGTGGGAGTAAAGTGATTTCCAAAAAAGTGGAGCTGAAGAAAGATCACTTTCACTCTTCTGATCAATTGAACATAGATTTGAAACCAAACCAATTGAGAAATAAAGTGAAGTGTTTGAAGAAGAAGCCATCAATTGCAACCAAAGAAGCAAGAATAAATAATGAGAAAGCTTCAGAATTCAAATCACTAACCAAAGTTCCTTCTTTTATGGTTACAATAGGAACTTCATACCTTGATACAGGCAGAGGTTATTTGTGTATTCCATTAGCTTTTGGAAATACTCACTTGAAGAACACCAAAGAATTCAATCTTCAAGTTTCAAATGGAGATTCTTGGAAGGTTACGTGTGTTGAACGTTGGTATTCTAATATACAGAGATTTGAAATGGGAAATGGTTGGAGGGCATTTGCAAGAGATAATAACTTGAAAGAAGGTGATATTTGTGTTTTTGAGTTGATAAAAAACACTCAAATATCATTTAAAGCTACCATTTTCCGATTGGGTATTTAA

Coding sequence (CDS)

ATGGCTTCCTCAACGCCTCCCCACTTCTTTAAAGTTCTTTCTCACACACTCACTCTACAAAAGCTTGAAGTTCCAACGAAATTTGTGAGACTACATGGAGAAACTCTGCAATCTGAGGAGGTTTGCCTTAAAGTAGTGAATGGGGTAAAATGGAAAATAGGATTAGAAAAAAGCAACCAAAAAGTTTGGTTAGAAAAAGGATGGGCAGAGTTTGTAAAGTTTTATTCTATTGATATTAATTTTTTTGTAGTATTCCAATATAACGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTCAATATCCAAGTGCTTCTAGAGAACTTAACAAAAACATATCTGAACATAGGGAGAGAGAAGAAAATGGATGTTTCCAAATATTGGGTAACAACCAGAGATCAAAAAAGGAAGATAAAACTCAAATTTTGCATTCACCAACTCCTAAGACCATGAAAACAAGTGATCAAGCAGGTGGGAGTAAAGTGATTTCCAAAAAAGTGGAGCTGAAGAAAGATCACTTTCACTCTTCTGATCAATTGAACATAGATTTGAAACCAAACCAATTGAGAAATAAAGTGAAGTGTTTGAAGAAGAAGCCATCAATTGCAACCAAAGAAGCAAGAATAAATAATGAGAAAGCTTCAGAATTCAAATCACTAACCAAAGTTCCTTCTTTTATGGTTACAATAGGAACTTCATACCTTGATACAGGCAGAGGTTATTTGTGTATTCCATTAGCTTTTGGAAATACTCACTTGAAGAACACCAAAGAATTCAATCTTCAAGTTTCAAATGGAGATTCTTGGAAGGTTACGTGTGTTGAACGTTGGTATTCTAATATACAGAGATTTGAAATGGGAAATGGTTGGAGGGCATTTGCAAGAGATAATAACTTGAAAGAAGGTGATATTTGTGTTTTTGAGTTGATAAAAAACACTCAAATATCATTTAAAGCTACCATTTTCCGATTGGGTATTTAA

Protein sequence

MASSTPPHFFKVLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHREREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSSDQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDNNLKEGDICVFELIKNTQISFKATIFRLGI

Homology

[Close]

BLAST of CaUC02G038440 vs. NCBI nr
Match: XP_022971710.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 9.0e-64
Identity = 139/328 (42.38%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TL   KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLIQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                             E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------TEEATKFQSLTMNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IPL F N H+++ KE N++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPLWFANAHMESPKEMNVEVSDGRVWKILCGERWPLGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. NCBI nr
Match: XP_023513190.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.8 bits (647), Expect = 2.0e-63
Identity = 138/328 (42.07%), Postives = 181/328 (55.18%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TLT  KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                            +E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------SEEATKFQSLTMNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IP  F N H+++ KE +++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. NCBI nr
Match: XP_022928091.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-63
Identity = 137/328 (41.77%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TL   KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLNQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                            +E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------SEEATKFQSLTTNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IP  F N H+++ KE +++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. NCBI nr
Match: KAG6571413.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-63
Identity = 137/328 (41.77%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TL   KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLNQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                            +E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------SEEATKFQSLTTNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IP  F N H+++ KE +++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPQWFANAHIESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. NCBI nr
Match: XP_022158241.1 (B3 domain-containing protein At4g01580-like [Momordica charantia])

HSP 1 Score: 249.2 bits (635), Expect = 4.9e-62
Identity = 141/330 (42.73%), Postives = 202/330 (61.21%), Query Frame = 0


Query: 3   SSTPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQK 62
           +S  PHFFKV L H LT +KL VP KFV  HGE LQ+EEV LKV NG +WK+G+EKSN K
Sbjct: 14  TSATPHFFKVILPHILTQRKLNVPKKFVSRHGEALQNEEVFLKVANGAEWKVGVEKSNGK 73

Query: 63  VWLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEH 122
           VW EKGW +FV+FYSI + +F+ F+Y  N+CFHV IFD +A+ I+YP             
Sbjct: 74  VWFEKGWQQFVEFYSIGVGYFLTFRYETNACFHVTIFDPSASEIEYP------------- 133

Query: 123 REREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHS 182
                    +  G+ +   +E + QIL     +  K +     S    KK+++  DH   
Sbjct: 134 --------MEDFGDIRSESEEFEDQILVYKRRREGKITQTNLYSVAHHKKMKISNDH--- 193

Query: 183 SDQL--NIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSY 242
            D++  N D + ++ ++++K +K +  +     R   E+AS F+S+T   SFM+T+G SY
Sbjct: 194 -DEVLRNEDFQSSKFKDRLKVIKCENGL-----RSVTERASTFQSMTPNHSFMITMGPSY 253

Query: 243 LDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQR-FEMGNGWRAF 302
           + TG+G   IP +F   H+K ++E +L+ S+G  WK+ C  R   N+ +  EM  GW+AF
Sbjct: 254 IHTGKGDPNIPKSFAKIHVKKSQEISLEDSDGRVWKIWCGVRPSQNVNKSVEMRGGWKAF 313

Query: 303 ARDNNLKEGDICVFELIKNTQISFKATIFR 329
           ARDN+L+EG ICVFEL+K T++SFK TIFR
Sbjct: 314 ARDNSLEEGHICVFELMKGTKLSFKVTIFR 313

[Close]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-24
Identity = 98/349 (28.08%), Postives = 153/349 (43.84%), Query Frame = 0


Query: 7   PHFFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLE 66
           P F K + S T+  ++L VP KFV    + L S  V L V +G  W++GL K++ K+W +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 67  KGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHRERE 126
            GW EFV  YSI I + ++F+Y GNS F V IF+ + + I Y S    L  +   H +R 
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG--LMDSAHNHFKRA 123

Query: 127 ENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVIS---------------- 186
               F+ L  ++ ++    + +  SP P++   +++   S  I                 
Sbjct: 124 R--LFEDL-EDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTP 183

Query: 187 --------KKVELKKDHFHSSDQLNIDLK-PNQLRNKVKCLKKKPSIATKEARINNEKAS 246
                   KK     +  +SS   + D +  ++        K+  +   +E  IN  K  
Sbjct: 184 KIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTF 243

Query: 247 EFKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVE 306
           E  +    P F V +  SYL  G   + +P  F   +L     F         W V C+ 
Sbjct: 244 EPTN----PFFRVVLRPSYLYRG-CIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLY 303

Query: 307 RWYSNIQRFEMGNGWRAFARDNNLKEGDICVFELIKNTQISFKATIFRL 330
           +      R +   GW  F  +NNL EGD+CVFEL++      K T FR+
Sbjct: 304 K----AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

[Close]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-12
Identity = 39/101 (38.61%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 9   FFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKG 68
           FFK VL  T+  + +++P +FV+L G  L SE V L+   G K  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYP 109
           W+EF + +SI+   F++F+Y  NS F V+IF+ +A   +YP
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129

[Close]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.8e-12
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 9   FFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKG 68
           FFK VL  T+  + + +P +FV+L G  L SE V L    G K  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYP 109
           W+EF + +SI+   F++F+Y  NS F V+IF+ +A    YP
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129

[Close]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 47/151 (31.13%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 5   TPPHFFKVLSHTLTLQK-LEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVW 64
           T   F K++  +  ++K ++VP +FVR  G  L ++ V L+   G K  I +++   +VW
Sbjct: 30  TVKKFIKIILLSRIIEKMMKVPARFVRF-GPKL-TDNVTLQTPVGFKRSIRIKRIGDEVW 89

Query: 65  LEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHRE 124
            EKGW+EF + +S+    F+ F Y G+SCF V+IFD +A+ I+YP    + N+   E  +
Sbjct: 90  FEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNR--EEVMD 149

Query: 125 REENGCFQILGNNQRSKKEDKTQILHSPTPK 155
            +E G      ++   +  D  ++L     K
Sbjct: 150 DDEQGFTGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot
Match: Q851W5 (B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0620400 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-11
Identity = 79/324 (24.38%), Postives = 139/324 (42.90%), Query Frame = 0


Query: 22  LEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKGWAEFVKFYSIDINF 81
           + +P KF+   G TL S  + L    G+ + + + +   K  L+ GW  FV  + I+ N 
Sbjct: 41  MTIPNKFLDHFGGTL-SRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEEND 100

Query: 82  FVVFQYNGNSCFHVLIFDK-------TATGIQYPSASRELNKNISEHREREENGCFQILG 141
            ++F++  NS F VLI D        T  GI+  S+ +E N    +      +   Q  G
Sbjct: 101 SLLFRHIENSRFEVLILDSDGCEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSG 160

Query: 142 NNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSSDQLNIDLKPNQL 201
           + +  + +  +      T K  +TS          +  E   D   S D+ + +L   Q+
Sbjct: 161 SKKFVRCQRASDSQRGKTAKLAETSSS-------GESGEEGTDSSTSEDESSYELDDPQM 220

Query: 202 ---RNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDTGRGYLCIPL 261
              RN V  L +  S++  +    +    + +   ++P F+  +  S +++ R  L IP 
Sbjct: 221 PPGRNYV--LSRWTSLSEAQEEKVDMLVQDIQ--PEIPVFVAIMKHSNVNSRRACLVIPK 280

Query: 262 AFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNG------WRAFARDNNLK 321
            + + H     +       G +      ++WY      + G+G      W+ F RDN++K
Sbjct: 281 RYASAHFPLESQTITLQRQGKN------KKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVK 340

Query: 322 EGDICVFELIKNTQISFKATIFRL 330
           EGD+C+F L K T   F AT+  L
Sbjct: 341 EGDMCIFHLTKFTGGEFGATVHLL 346

[Close]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1I6H9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111470377 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 139/328 (42.38%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TL   KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLIQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                             E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------TEEATKFQSLTMNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IPL F N H+++ KE N++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPLWFANAHMESPKEMNVEVSDGRVWKILCGERWPLGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1EJA7 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111434979 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.7e-63
Identity = 137/328 (41.77%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 4   STPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKV 63
           S  PHFFKV L  TL   KL +P KFVR HGE L++EEV LKV +G +WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLNQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHR 123
           W EKGW EFVKFYS++I  F+ F+Y GNSCFHV+IFDKTA+ I+YP              
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYP-------------- 126

Query: 124 EREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSS 183
                     LG   + KK ++  I                                   
Sbjct: 127 ----------LGCGGKVKKRERFSI----------------------------------- 186

Query: 184 DQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDT 243
                                            +E+A++F+SLT  PSFMVT+G SYL T
Sbjct: 187 ---------------------------------SEEATKFQSLTTNPSFMVTMGASYLHT 242

Query: 244 GRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDN 303
           G+ YL IP  F N H+++ KE +++VS+G  WK+ C ERW   ++R EM  GWR FARDN
Sbjct: 247 GKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVKRVEMRGGWRDFARDN 242

Query: 304 NLKEGDICVFELIKNTQISFKATIFRLG 331
            LK+GDICVFEL++ +++SFKATIFR G
Sbjct: 307 GLKKGDICVFELMETSELSFKATIFRSG 242

[Close]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1E0D8 (B3 domain-containing protein At4g01580-like OS=Momordica charantia OX=3673 GN=LOC111024773 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.4e-62
Identity = 141/330 (42.73%), Postives = 202/330 (61.21%), Query Frame = 0


Query: 3   SSTPPHFFKV-LSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQK 62
           +S  PHFFKV L H LT +KL VP KFV  HGE LQ+EEV LKV NG +WK+G+EKSN K
Sbjct: 14  TSATPHFFKVILPHILTQRKLNVPKKFVSRHGEALQNEEVFLKVANGAEWKVGVEKSNGK 73

Query: 63  VWLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEH 122
           VW EKGW +FV+FYSI + +F+ F+Y  N+CFHV IFD +A+ I+YP             
Sbjct: 74  VWFEKGWQQFVEFYSIGVGYFLTFRYETNACFHVTIFDPSASEIEYP------------- 133

Query: 123 REREENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHS 182
                    +  G+ +   +E + QIL     +  K +     S    KK+++  DH   
Sbjct: 134 --------MEDFGDIRSESEEFEDQILVYKRRREGKITQTNLYSVAHHKKMKISNDH--- 193

Query: 183 SDQL--NIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSY 242
            D++  N D + ++ ++++K +K +  +     R   E+AS F+S+T   SFM+T+G SY
Sbjct: 194 -DEVLRNEDFQSSKFKDRLKVIKCENGL-----RSVTERASTFQSMTPNHSFMITMGPSY 253

Query: 243 LDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVERWYSNIQR-FEMGNGWRAF 302
           + TG+G   IP +F   H+K ++E +L+ S+G  WK+ C  R   N+ +  EM  GW+AF
Sbjct: 254 IHTGKGDPNIPKSFAKIHVKKSQEISLEDSDGRVWKIWCGVRPSQNVNKSVEMRGGWKAF 313

Query: 303 ARDNNLKEGDICVFELIKNTQISFKATIFR 329
           ARDN+L+EG ICVFEL+K T++SFK TIFR
Sbjct: 314 ARDNSLEEGHICVFELMKGTKLSFKVTIFR 313

[Close]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL
Match: A0A1S4E1R2 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC107991566 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 141/295 (47.80%), Postives = 184/295 (62.37%), Query Frame = 0


Query: 45  VVNGVKWKIGLEKSNQKVWLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATG 104
           +V+G KWK+GL+KSN+KVW EKGW EFVKF+SID   F+ F+Y GNSCF V+IFD+TAT 
Sbjct: 1   MVSGAKWKVGLKKSNEKVWFEKGWEEFVKFHSIDYGHFLTFRYEGNSCFQVVIFDQTATE 60

Query: 105 IQYPSASREL--NKNISEHREREENGCFQILGNNQRSKKE-DKTQILHSPTPKTMKTSDQ 164
           I+YP + +    NK + E + +       I    +R++KE  + + +     K MKTSD+
Sbjct: 61  IEYPISFKNQFDNKKMFEEKRKSVQETLPI----KRARKEVHEDECVPQTLYKKMKTSDE 120

Query: 165 AGGSKVISKKVELKKDHFHSSDQLNIDLKPNQLRNKVKCLKKKPSIATKEARINNEKASE 224
            G +KVI +  EL++     + +   DLK + L        KK  I +K +     KAS+
Sbjct: 121 VGANKVIWRSHELQEVEMKKNTE---DLKSSDL--------KKGKIWSKRSSTIFAKASK 180

Query: 225 FKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDS--WKVTCV 284
           FK +T  PSFMVT+G SYL T    L IP  F +T+LK TK+  L VS+ D   WK+ CV
Sbjct: 181 FKEITTNPSFMVTMGRSYLHTSN--LNIPTGFASTYLKETKDLILYVSSDDQKVWKILCV 240

Query: 285 ERWY--SNIQRFEMGNGWRAFARDNNLKEGDICVFELIKNTQ--ISFKATIFRLG 331
           ERW    + QRFEM  GWR FARDN+LKEGDICVFEL+KN Q    FK TIFR G
Sbjct: 241 ERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFRFG 278

[Close]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL
Match: A0A5A7TS22 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002630 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51
Identity = 140/357 (39.22%), Postives = 199/357 (55.74%), Query Frame = 0


Query: 3   SSTPPHFFKVLSH-TLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQK 62
           SS  PHFFKV+ H TLT QKLE+P KFV+ +G ++   +V L + +G  WKI L+KS+ K
Sbjct: 6   SSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGK 65

Query: 63  VWLEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEH 122
           ++  +GW EFV+FYS+   +F+VFQ  G  CF+VLIFD +AT I YP   R L   I + 
Sbjct: 66  IFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYP--IRGLLDIIPKS 125

Query: 123 REREENGCFQILG----NNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVISK--KVELK 182
           R  +E    QIL       +R +KE++T     P  ++++     G  K++ K  KV++ 
Sbjct: 126 RNEDEEESIQILNEMVLKKRRMEKEEET-----PAYRSLR-----GLKKMMRKNAKVKIA 185

Query: 183 KDHFHSSDQLNIDLKPNQLRNKVKCL----------------------KKKPSIATKEAR 242
           K+   +SD+   DL+ +  R +                          +K P   T+   
Sbjct: 186 KNRGITSDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQL 245

Query: 243 INNEKASEFKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDS 302
              ++AS FKS    PSFMVT+  SY+ TG  YL +P  FG  ++K + +  L+V +G S
Sbjct: 246 AVKKRASRFKSRRNNPSFMVTMRPSYIQTG-NYLSLPRRFGERYIKESVDVKLEVGDGRS 305

Query: 303 WKVTCVERWYSNIQRFEMGNGWRAFARDNNLKEGDICVFELI-KNTQISFKATIFRL 330
           W+V C  RW    +R E+  GW+ FA DN LKEGDICVFEL+ KN  + FK  IFRL
Sbjct: 306 WRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRL 349

[Close]

BLAST of CaUC02G038440 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.9e-25
Identity = 98/349 (28.08%), Postives = 153/349 (43.84%), Query Frame = 0


Query: 7   PHFFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLE 66
           P F K + S T+  ++L VP KFV    + L S  V L V +G  W++GL K++ K+W +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 67  KGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHRERE 126
            GW EFV  YSI I + ++F+Y GNS F V IF+ + + I Y S    L  +   H +R 
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG--LMDSAHNHFKRA 123

Query: 127 ENGCFQILGNNQRSKKEDKTQILHSPTPKTMKTSDQAGGSKVIS---------------- 186
               F+ L  ++ ++    + +  SP P++   +++   S  I                 
Sbjct: 124 R--LFEDL-EDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTP 183

Query: 187 --------KKVELKKDHFHSSDQLNIDLK-PNQLRNKVKCLKKKPSIATKEARINNEKAS 246
                   KK     +  +SS   + D +  ++        K+  +   +E  IN  K  
Sbjct: 184 KIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTF 243

Query: 247 EFKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLKNTKEFNLQVSNGDSWKVTCVE 306
           E  +    P F V +  SYL  G   + +P  F   +L     F         W V C+ 
Sbjct: 244 EPTN----PFFRVVLRPSYLYRG-CIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLY 303

Query: 307 RWYSNIQRFEMGNGWRAFARDNNLKEGDICVFELIKNTQISFKATIFRL 330
           +      R +   GW  F  +NNL EGD+CVFEL++      K T FR+
Sbjct: 304 K----AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

[Close]

BLAST of CaUC02G038440 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 39/101 (38.61%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 9   FFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKG 68
           FFK VL  T+  + +++P +FV+L G  L SE V L+   G K  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYP 109
           W+EF + +SI+   F++F+Y  NS F V+IF+ +A   +YP
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129

[Close]

BLAST of CaUC02G038440 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-13
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 9   FFK-VLSHTLTLQKLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEKG 68
           FFK VL  T+  + + +P +FV+L G  L SE V L    G K  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYP 109
           W+EF + +SI+   F++F+Y  NS F V+IF+ +A    YP
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129

[Close]

BLAST of CaUC02G038440 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 47/151 (31.13%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 5   TPPHFFKVLSHTLTLQK-LEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVW 64
           T   F K++  +  ++K ++VP +FVR  G  L ++ V L+   G K  I +++   +VW
Sbjct: 30  TVKKFIKIILLSRIIEKMMKVPARFVRF-GPKL-TDNVTLQTPVGFKRSIRIKRIGDEVW 89

Query: 65  LEKGWAEFVKFYSIDINFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHRE 124
            EKGW+EF + +S+    F+ F Y G+SCF V+IFD +A+ I+YP    + N+   E  +
Sbjct: 90  FEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNR--EEVMD 149

Query: 125 REENGCFQILGNNQRSKKEDKTQILHSPTPK 155
            +E G      ++   +  D  ++L     K
Sbjct: 150 DDEQGFTGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of CaUC02G038440 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-10
Identity = 72/294 (24.49%), Postives = 134/294 (45.58%), Query Frame = 0


Query: 21  KLEVPTKFVRLHGETLQSEEVCLKVVNGVKWKIGLEKSNQKVWLEK-GWAEFVKFYSIDI 80
           +L +P KF   H +    + V LK  +GV + +G+E+ ++K    + GW +FVK +S++ 
Sbjct: 36  RLVIPRKF-STHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEE 95

Query: 81  NFFVVFQYNGNSCFHVLIFDKTATGIQYPSASRELNKNISEHREREENGCFQILGNNQRS 140
           N  +VF+++G S F VL+FD   T  + P++        +E  +    G  Q    N   
Sbjct: 96  NDLLVFKFHGVSEFEVLVFD-GQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDI 155

Query: 141 KKEDKTQILHSPTPKTMKTSDQAGGSKVISKKVELKKDHFHSSDQLNIDLKPNQLRNKVK 200
                   + SPT  T++ S+   G   +S   +++++   S+D L+             
Sbjct: 156 DTASAQLPVISPT-STVRVSE---GKYPLSGFKKMRRE--LSNDNLD------------- 215

Query: 201 CLKKKPSIATKEARINNEKASEFKSLTKVPSFMVTIGTSYLDTGRGYLCIPLAFGNTHLK 260
              +K  +    A  N +  S  K       F+V +  S++   + +L IP  +   ++ 
Sbjct: 216 ---QKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHV-VSKCFLTIPYKWCVKNML 275

Query: 261 NTKEFNLQVSNGDSWKVTCVERWYSNIQRFEMGNGWRAFARDNNLKEGDICVFE 314
            T++  +   +   W++      +       +  GW+ F +DNNL+EGD+CVFE
Sbjct: 276 ITRQEVVMQVDQTKWEMKF--NIFGARGSGGISTGWKKFVQDNNLREGDVCVFE 302

The following BLAST results are available for this feature:

BLAST of CaUC02G038440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971710.1	9.0e-64	42.38	B3 domain-containing transcription factor VRN1-like [Cucurbita maxima]	[more]
XP_023513190.1	2.0e-63	42.07	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928091.1	7.6e-63	41.77	B3 domain-containing transcription factor VRN1-like [Cucurbita moschata]	[more]
KAG6571413.1	7.6e-63	41.77	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_022158241.1	4.9e-62	42.73	B3 domain-containing protein At4g01580-like [Momordica charantia]	[more]

BLAST of CaUC02G038440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	5.5e-24	28.08	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q84R27	1.7e-12	38.61	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9ZSH7	4.8e-12	38.61	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q9XIB4	1.8e-11	31.13	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]
Q851W5	3.1e-11	24.38	B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CaUC02G038440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6H9	4.3e-64	42.38	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EJA7	3.7e-63	41.77	B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1E0D8	2.4e-62	42.73	B3 domain-containing protein At4g01580-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S4E1R2	1.6e-58	47.80	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7TS22	1.4e-51	39.22	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ...	[more]

BLAST of CaUC02G038440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	3.9e-25	28.08	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	1.2e-13	38.61	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	3.4e-13	38.61	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	1.3e-12	31.13	AP2/B3-like transcriptional factor family protein	[more]
AT4G33280.1	2.7e-10	24.49	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 231..330 e-value: 5.4E-12 score: 55.8 coord: 9..101 e-value: 5.1E-14 score: 62.6
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 243..328 e-value: 1.5E-15 score: 56.8 coord: 9..100 e-value: 1.2E-15 score: 57.2
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 7..101 score: 12.153322
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 232..330 score: 12.378946
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 229..328 e-value: 3.91662E-17 score: 73.5161
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 7..99 e-value: 4.95729E-20 score: 81.6052
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 1..102 e-value: 8.0E-24 score: 85.5
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 206..329 e-value: 9.9E-27 score: 95.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 3..101
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 227..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..162
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 3..328
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 3..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G038440.1	CaUC02G038440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding