Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCCACAGCAATCTCACCCGTCCTCCAAATCCTCCAACCACGATGTCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGTCGCCGGAATCTCTCTCCGCTAGCAGAACTCGGCGACAGACTCTGTTGTTTCTGACGACGACGGCGATGGCGGCGGTCGTGGGGAGAGAGAATCCGTCAATGGCGAAGGACATTCCTCTGTTCGGGCTGAGGAAGAAACTGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTCGAGGCAGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAGCAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAAAAAGAAATCGAAACGGCAGTAAATTTCGGAGCGCTTTCGCAGGCCGGGGCAGTCGCCGGAGCGGAGGTCGTTGGAGTTCTCGTAGCTACGTCGATCGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
mRNA sequence
ATGTCTTCCACAGCAATCTCACCCGTCCTCCAAATCCTCCAACCACGATGTCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGTCGCCGGAATCTCTCTCCGCTAGCAGAACTCGGCGACAGACTCTGTTGTTTCTGACGACGACGGCGATGGCGGCGGTCGTGGGGAGAGAGAATCCGTCAATGGCGAAGGACATTCCTCTGTTCGGGCTGAGGAAGAAACTGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTCGAGGCAGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAGCAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAAAAAGAAATCGAAACGGCAGTAAATTTCGGAGCGCTTTCGCAGGCCGGGGCAGTCGCCGGAGCGGAGGTCGTTGGAGTTCTCGTAGCTACGTCGATCGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
Coding sequence (CDS)
ATGTCTTCCACAGCAATCTCACCCGTCCTCCAAATCCTCCAACCACGATGTCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGTCGCCGGAATCTCTCTCCGCTAGCAGAACTCGGCGACAGACTCTGTTGTTTCTGACGACGACGGCGATGGCGGCGGTCGTGGGGAGAGAGAATCCGTCAATGGCGAAGGACATTCCTCTGTTCGGGCTGAGGAAGAAACTGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTCGAGGCAGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAGCAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAAAAAGAAATCGAAACGGCAGTAAATTTCGGAGCGCTTTCGCAGGCCGGGGCAGTCGCCGGAGCGGAGGTCGTTGGAGTTCTCGTAGCTACGTCGATCGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
Protein sequence
MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRENPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Homology
BLAST of CaUC02G038380 vs. NCBI nr
Match:
XP_038900735.1 (uncharacterized protein LOC120087852 [Benincasa hispida])
HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLT-TTAMAAVVGR 60
M+STAISPVLQIL RCRLNITVRAAAVKS PESLSA RTRRQTLLFLT T A AAVVGR
Sbjct: 1 MASTAISPVLQILPSRCRLNITVRAAAVKSLPESLSARRTRRQTLLFLTATAAAAAVVGR 60
Query: 61 ENPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERG 120
ENPS+A+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERG
Sbjct: 61 ENPSVAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERG 120
Query: 121 IETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
IETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Sbjct: 121 IETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
BLAST of CaUC02G038380 vs. NCBI nr
Match:
XP_004148045.1 (uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical protein Csa_006379 [Cucumis sativus])
HSP 1 Score: 273.1 bits (697), Expect = 1.6e-69
Identity = 153/167 (91.62%), Postives = 160/167 (95.81%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+STAISP LQIL+PRCRL+ TVRAAAVKS ESLSASRTRRQTLLFLT TA AAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+AAER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIETAVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 167
BLAST of CaUC02G038380 vs. NCBI nr
Match:
XP_022971729.1 (uncharacterized protein LOC111470397 [Cucurbita maxima])
HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 151/167 (90.42%), Postives = 160/167 (95.81%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+ST ISP+LQILQPRCRLNITVRAA+VK PESLSA+RTRRQTLL LT TA AAVVGRE
Sbjct: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA++IPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+ AERGI
Sbjct: 61 NPSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 166
BLAST of CaUC02G038380 vs. NCBI nr
Match:
XP_022928047.1 (uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 uncharacterized protein LOC111776892 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 267.3 bits (682), Expect = 8.8e-68
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+ST ISP+LQILQPRCRLNITVRAA+VK PESLSA+RTRRQTLL LT TA AAVVGRE
Sbjct: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+ AERGI
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 167
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 165
BLAST of CaUC02G038380 vs. NCBI nr
Match:
XP_008457854.1 (PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo] >KAA0045850.1 Synechocystis YCF37 [Cucumis melo var. makuwa] >TYK13738.1 Synechocystis YCF37 [Cucumis melo var. makuwa])
HSP 1 Score: 263.5 bits (672), Expect = 1.3e-66
Identity = 150/167 (89.82%), Postives = 158/167 (94.61%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+STAISP LQIL+PRCRL+ TVRAAAVK ESLSASRTRRQTLLFLT T AAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT--AAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+AAER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIETAVSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 165
BLAST of CaUC02G038380 vs. ExPASy TrEMBL
Match:
A0A0A0LJU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70
Identity = 153/167 (91.62%), Postives = 160/167 (95.81%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+STAISP LQIL+PRCRL+ TVRAAAVKS ESLSASRTRRQTLLFLT TA AAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+AAER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIETAVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 167
BLAST of CaUC02G038380 vs. ExPASy TrEMBL
Match:
A0A6J1I9D9 (uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 151/167 (90.42%), Postives = 160/167 (95.81%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+ST ISP+LQILQPRCRLNITVRAA+VK PESLSA+RTRRQTLL LT TA AAVVGRE
Sbjct: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA++IPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+ AERGI
Sbjct: 61 NPSMAENIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 166
BLAST of CaUC02G038380 vs. ExPASy TrEMBL
Match:
A0A6J1EIT8 (uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC111434949 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 4.3e-68
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+ST ISP+LQILQPRCRLNITVRAA+VK PESLSA+RTRRQTLL LT TA AAVVGRE
Sbjct: 1 MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATATAAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+ AERGI
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 167
ETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 ETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 165
BLAST of CaUC02G038380 vs. ExPASy TrEMBL
Match:
A0A5D3CRC5 (Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002670 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 6.2e-67
Identity = 150/167 (89.82%), Postives = 158/167 (94.61%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+STAISP LQIL+PRCRL+ TVRAAAVK ESLSASRTRRQTLLFLT T AAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT--AAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+AAER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIETAVSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 165
BLAST of CaUC02G038380 vs. ExPASy TrEMBL
Match:
A0A1S3C6G5 (uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 6.2e-67
Identity = 150/167 (89.82%), Postives = 158/167 (94.61%), Query Frame = 0
Query: 1 MSSTAISPVLQILQPRCRLNITVRAAAVKSSPESLSASRTRRQTLLFLTTTAMAAVVGRE 60
M+STAISP LQIL+PRCRL+ TVRAAAVK ESLSASRTRRQTLLFLT T AAVVGRE
Sbjct: 1 MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTAT--AAVVGRE 60
Query: 61 NPSMAKDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGI 120
NPSMA+DIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAE+GI+AAER I
Sbjct: 61 NPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREI 120
Query: 121 ETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 168
ETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 ETAEKEIETAVSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 165
BLAST of CaUC02G038380 vs. TAIR 10
Match:
AT2G23670.1 (homolog of Synechocystis YCF37 )
HSP 1 Score: 142.1 bits (357), Expect = 4.0e-34
Identity = 90/157 (57.32%), Postives = 109/157 (69.43%), Query Frame = 0
Query: 13 LQPRCRLNITVRAAAVKSSPESLSA---SRTRRQTLLFLTTTAMAAVVGRENPSMAKDIP 72
LQ RC V A S+ +LS+ + R+ LLF + TA V G + SMA++IP
Sbjct: 17 LQARCARTAHVSPRAAHSNKPALSSFSLTGASRRNLLF-SLTAATVVTGLQPASMAENIP 76
Query: 73 LFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEQGIVAAERGIETAEKEIET 132
LFG+RKKLKK EEEA EIV+EGFE AEKG++ AE+ G+ AAERG+ETAEKEI T
Sbjct: 77 LFGIRKKLKKAEEEAVEIVKEGFETAEKGVDAAEK-------GLEAAERGVETAEKEIVT 136
Query: 133 AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 167
AV+F L+QAGAV AE VGVLVATS+VNGILGPE Q
Sbjct: 137 AVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQ 165
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038900735.1 | 3.2e-70 | 94.05 | uncharacterized protein LOC120087852 [Benincasa hispida] | [more] |
XP_004148045.1 | 1.6e-69 | 91.62 | uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical ... | [more] |
XP_022971729.1 | 2.3e-68 | 90.42 | uncharacterized protein LOC111470397 [Cucurbita maxima] | [more] |
XP_022928047.1 | 8.8e-68 | 90.36 | uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 unchar... | [more] |
XP_008457854.1 | 1.3e-66 | 89.82 | PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo] >KAA0045850.1 Syn... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LJU7 | 7.8e-70 | 91.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1 | [more] |
A0A6J1I9D9 | 1.1e-68 | 90.42 | uncharacterized protein LOC111470397 OS=Cucurbita maxima OX=3661 GN=LOC111470397... | [more] |
A0A6J1EIT8 | 4.3e-68 | 90.36 | uncharacterized protein LOC111434949 OS=Cucurbita moschata OX=3662 GN=LOC1114349... | [more] |
A0A5D3CRC5 | 6.2e-67 | 89.82 | Synechocystis YCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G... | [more] |
A0A1S3C6G5 | 6.2e-67 | 89.82 | uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT2G23670.1 | 4.0e-34 | 57.32 | homolog of Synechocystis YCF37 | [more] |