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CaUC02G038110 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATGCTTAGACATGTACAACTCCGACCACAAGCCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGGAGCTGCCCCTCCCCCCGTCTCCTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTAATACTCTTAGAGACGAGCTTCTGGTGGAGGAAGAGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGATTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAATGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTTCGAGGGCAAACTCATCCCACCAGGTAAACCAATAATTATTCAATCTCACTCTCCCTCTTTTTTAACTCCTGTTTTTCCTAAATTATTGGAGGGGTAATTCGGGAATTCGTATTTTTCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAG ATGGCATGCTTAGACATGTACAACTCCGACCACAAGCCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGGAGCTGCCCCTCCCCCCGTCTCCTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTAATACTCTTAGAGACGAGCTTCTGGTGGAGGAAGAGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGATTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAATGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTTCGAGGGCAAACTCATCCCACCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAG ATGGCATGCTTAGACATGTACAACTCCGACCACAAGCCCCTCCACCGCCGTGCTCCGGCCAGCAGCCCTCGAATCTCCTTCTCGAGTGACTTCATCGACATCCAACAATCTCTCAAACACCAAGAGCAGCGCTCCGGAGCTGCCCCTCCCCCCGTCTCCTCCTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTACAAGGACTCCAACCGGGCGGCTAATACTCTTAGAGACGAGCTTCTGGTGGAGGAAGAGGAGGAAGACGACGAGGAGAATGAGAATGACAACGACGACGCTTCGCAGAGGCCTTCGTCTAGGGGCCGGTGGAAGGGATTTCTTGGGTTGAAAAAGTCTCACAATAATGGTTCAAAGAAAGGGTGTAGAAACGACGGCTCCAGCGGCAGCCGTGAGGTGGGCAATGGCAAAAGGCCATTCGGTTGGTCGTCTTCTTCACCTAGTTCGAGGGCAAACTCATCCCACCAGGTACAAAATGAAGGAGGATCAAGTTGCAAAGACCTGGAGATTGATTTCTAG MACLDMYNSDHKPLHRRAPASSPRISFSSDFIDIQQSLKHQEQRSGAAPPPVSSSSDFEFSVSNYSMMPADELFFEGRLLPYKDSNRAANTLRDELLVEEEEEDDEENENDNDDASQRPSSRGRWKGFLGLKKSHNNGSKKGCRNDGSSGSREVGNGKRPFGWSSSSPSSRANSSHQVQNEGGSSCKDLEIDF Homology
BLAST of CaUC02G038110 vs. NCBI nr
Match: XP_038902682.1 (uncharacterized protein LOC120089319 [Benincasa hispida]) HSP 1 Score: 311.2 bits (796), Expect = 6.1e-81 Identity = 165/194 (85.05%), Postives = 176/194 (90.72%), Query Frame = 0
BLAST of CaUC02G038110 vs. NCBI nr
Match: XP_008457833.1 (PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 uncharacterized protein E6C27_scaffold243G003410 [Cucumis melo var. makuwa] >TYJ99465.1 uncharacterized protein E5676_scaffold123G00280 [Cucumis melo var. makuwa]) HSP 1 Score: 303.9 bits (777), Expect = 9.8e-79 Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0
BLAST of CaUC02G038110 vs. NCBI nr
Match: XP_004148034.1 (uncharacterized protein LOC101205218 [Cucumis sativus] >KGN62010.1 hypothetical protein Csa_006289 [Cucumis sativus]) HSP 1 Score: 303.9 bits (777), Expect = 9.8e-79 Identity = 163/194 (84.02%), Postives = 177/194 (91.24%), Query Frame = 0
BLAST of CaUC02G038110 vs. NCBI nr
Match: XP_023534650.1 (uncharacterized protein LOC111796161 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235.7 bits (600), Expect = 3.3e-58 Identity = 145/186 (77.96%), Postives = 156/186 (83.87%), Query Frame = 0
BLAST of CaUC02G038110 vs. NCBI nr
Match: XP_022928078.1 (uncharacterized protein LOC111434969 [Cucurbita moschata] >XP_022954346.1 uncharacterized protein LOC111456619 [Cucurbita moschata] >KAG6571431.1 hypothetical protein SDJN03_30346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 233.0 bits (593), Expect = 2.1e-57 Identity = 141/192 (73.44%), Postives = 151/192 (78.65%), Query Frame = 0
BLAST of CaUC02G038110 vs. ExPASy TrEMBL
Match: A0A5A7TUK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00280 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79 Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0
BLAST of CaUC02G038110 vs. ExPASy TrEMBL
Match: A0A0A0LJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285940 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79 Identity = 163/194 (84.02%), Postives = 177/194 (91.24%), Query Frame = 0
BLAST of CaUC02G038110 vs. ExPASy TrEMBL
Match: A0A1S3C600 (uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79 Identity = 166/195 (85.13%), Postives = 176/195 (90.26%), Query Frame = 0
BLAST of CaUC02G038110 vs. ExPASy TrEMBL
Match: A0A6J1EMU8 (uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC111434969 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57 Identity = 141/192 (73.44%), Postives = 151/192 (78.65%), Query Frame = 0
BLAST of CaUC02G038110 vs. ExPASy TrEMBL
Match: A0A6J1KZD6 (uncharacterized protein LOC111499636 OS=Cucurbita maxima OX=3661 GN=LOC111499636 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 3.0e-57 Identity = 144/186 (77.42%), Postives = 154/186 (82.80%), Query Frame = 0
BLAST of CaUC02G038110 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23 Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 0
BLAST of CaUC02G038110 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 5.3e-14 Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of CaUC02G038110 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). ) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CaUC02G038110 vs. TAIR 10
Match: AT3G19200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06 Identity = 50/123 (40.65%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of CaUC02G038110 vs. TAIR 10
Match: AT5G19340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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