CaUC02G037460 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G037460
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	zinc-regulated protein 8-like
Location	Ciama_Chr02: 23554062 .. 23554421 (+)
RNA-Seq Expression	CaUC02G037460
Synteny	CaUC02G037460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCTCTTCTTCTCCCAATTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG

mRNA sequence

ATGGAACCCTCTTCTTCTCCCAATTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG

Coding sequence (CDS)

ATGGAACCCTCTTCTTCTCCCAATTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCCCCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCACGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTCGTCGCTGGAGTCCGCCGGTGGTAG

Protein sequence

MEPSSSPNFLSNSNPPLSSSESEFSDIEMTPLQSYTSLKDLLPDSPSPPPSAVAAPLHCPAWDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKHGFGCIEWLAAVVAGVRRW

Homology

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BLAST of CaUC02G037460 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 100/119 (84.03%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 5   SSPNFLSNSNPPLSSSESEFSDIEMTPLQSYTSLKDLLPDSPSPPPSAVAAPLHCPAWDE 64
           SSP FLS S+  LSSSE EFSDIEMTPLQSYTSLKDLLPD+PSPPPSA A PL CPAWDE
Sbjct: 4   SSPTFLS-SDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSA-AYPLQCPAWDE 63

Query: 65  LPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKHGFGCIEWLAAVV----AGVRRW 120
           LPIKNPLVKHAALAYLQPMLTPP AGDR+FMRRLKKHGFGCIEWL AV+     GVRRW
Sbjct: 64  LPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW 120

[Close]

BLAST of CaUC02G037460 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 19  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPAS----PPTIMSPTHNSS 78

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 134

[Close]

BLAST of CaUC02G037460 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 19  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPAS----PPTIMSPTHNSS 78

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 134

[Close]

BLAST of CaUC02G037460 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 17  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPVS----PPTIMSPTHNSS 76

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 77  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 132

[Close]

BLAST of CaUC02G037460 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba])

HSP 1 Score: 101.7 bits (252), Expect = 4.6e-18
Identity = 65/120 (54.17%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQS--YTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP FL +    L S E + SDIEM  +QS  YTSLKDLLP  PSPPP A+ +P H  +
Sbjct: 25  SHSPTFLFHDG-GLDSPEFKVSDIEMITIQSLTYTSLKDLLP--PSPPP-AIMSPTHNSS 84

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKH--------GFGCIEWLAAVV 114
           W E+PI+NPLVKHAALAYLQPM TP  A D+    +LK          GFGC  WL  VV
Sbjct: 85  WHEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

[Close]

BLAST of CaUC02G037460 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-36
Identity = 88/117 (75.21%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 3   PSSSPNFLSNSNPPLSSSESEFS-DIEMTPLQSYTSLKDLLPDSPSPPPSAVAAPLHCPA 62
           PS SP    + N PLSS E EFS DIEMTPLQSYTSLKDLLPDSPSPPPSA +     PA
Sbjct: 9   PSPSPTSFLSPNHPLSSPELEFSDDIEMTPLQSYTSLKDLLPDSPSPPPSATS-----PA 68

Query: 63  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKHGFGCIEWLAAVVAGVRR 119
           +D+LPIKNPLVKHAALAYLQPMLTPP     TF+R LKKHGFGCIEWLAAVV  VRR
Sbjct: 69  FDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRILKKHGFGCIEWLAAVVHEVRR 120

[Close]

BLAST of CaUC02G037460 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-19
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 19  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPAS----PPTIMSPTHNSS 78

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 134

[Close]

BLAST of CaUC02G037460 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-19
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 19  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPAS----PPTIMSPTHNSS 78

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 134

[Close]

BLAST of CaUC02G037460 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.6e-19
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQ--SYTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP+FL     P    E E SDIEM  +Q  +YTSLKDLLP S    P  + +P H  +
Sbjct: 17  SHSPSFLL----PNGFGEIEISDIEMITIQTVTYTSLKDLLPVS----PPTIMSPTHNSS 76

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKK-------HGFGCIEWLAAVV- 118
           W E+PIKNPLVKHAALAYLQPM TPP  GD+  +R L++       +G GC  WL  VV 
Sbjct: 77  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVL 132

[Close]

BLAST of CaUC02G037460 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-18
Identity = 65/120 (54.17%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 4   SSSPNFLSNSNPPLSSSESEFSDIEMTPLQS--YTSLKDLLPDSPSPPPSAVAAPLHCPA 63
           S SP FL +    L S E + SDIEM  +QS  YTSLKDLLP  PSPPP A+ +P H  +
Sbjct: 25  SHSPTFLFHDG-GLDSPEFKVSDIEMITIQSLTYTSLKDLLP--PSPPP-AIMSPTHNSS 84

Query: 64  WDELPIKNPLVKHAALAYLQPMLTPPVAGDRTFMRRLKKH--------GFGCIEWLAAVV 114
           W E+PI+NPLVKHAALAYLQPM TP  A D+    +LK          GFGC  WL  VV
Sbjct: 85  WHEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

[Close]

BLAST of CaUC02G037460 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.6e-05
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 31  PLQSYTSLKDLLPDSPSPPPS-----AVAAPLHCPAWDELPIKNPLVKHAALAYLQPMLT 90
           PL  YTSLKD+LP S +   S     AVA+ +  P    + I+N LVK AA +YLQP  T
Sbjct: 37  PLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPT---ITIRNRLVKQAACSYLQPS-T 96

Query: 91  PPVAGDRTFMRRL 99
           P  + + +F+RR+
Sbjct: 97  PTPSSNPSFLRRV 105

The following BLAST results are available for this feature:

BLAST of CaUC02G037460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571006.1	1.3e-44	84.03	hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_021810412.1	1.2e-18	51.61	uncharacterized protein LOC110753763 [Prunus avium]	[more]
PQQ14465.1	1.2e-18	51.61	uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]	[more]
PQQ02572.1	1.6e-18	51.61	uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]	[more]
XP_015893260.1	4.6e-18	54.17	zinc-regulated protein 8-like [Ziziphus jujuba]	[more]

BLAST of CaUC02G037460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G037460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPR9	2.3e-36	75.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1	[more]
A0A314Z2H1	5.8e-19	51.61	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200...	[more]
A0A6P5S7A4	5.8e-19	51.61	uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE...	[more]
A0A314Y647	7.6e-19	51.61	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_106...	[more]
A0A6P4ADJ4	2.2e-18	54.17	zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 ...	[more]

BLAST of CaUC02G037460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52520.1	3.6e-05	43.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34569:SF12	SUBFAMILY NOT NAMED	coord: 19..115
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 19..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G037460.1	CaUC02G037460.1	mRNA