CaUC02G037170 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G037170
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Actin-depolymerizing factor
Location	Ciama_Chr02: 23041875 .. 23042848 (+)
RNA-Seq Expression	CaUC02G037170
Synteny	CaUC02G037170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGTTATTATGATAAGAGGGAAAAACGTAATTATGTAGAATTGACAAGGGTATTTTGGTAAGGCGAAGTTTATATAAAGCCCCAACTGAGTTCACTCTCACTCACGGTACTCCATTTTCAGAGCTTAGAGTTTTTCAAACACAGTCCCCGACGAGCACTAACAATGGCGATGGCTTTCAAGATGGTAACTAATTTAACCACTTCACTCTTACGATCTCTTCTGTTTTTTTCTTTCTTGATTCTGATTCTGATTCCATTTCTTGACCCCGAATCTCAGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCCTTCATGGAGATGAAATGGAAGAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCGGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCGGTCTTCGATTTCGACTTCGTTACTGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTATCTTCCGCGATTCTTTGCTGTTTTTCCTCGATCGCATCTGCTCTTCATTCCTAGAATAATCGTTCAATTCTCTCTGATTCCTCAAATTCATAATCTCTAATTTCTGTTACAGTGTCTGATTAATTAGATGAGTTCTGATCGTAAGCGGAATTCGAATTTGTCTAGAGAAACCCTAACCGATTATTTGAATCGAATACTGTAAATTGAACGGATCTGAATCTGAAATTGAAATTGAAATTGAAACTGAAACCGATGGGTTGGTTTGGAACAGGTCGCCCACCGAATCAAGAATCAGAGCTAAAATTCTATACGCAACTTCAAAGGATGGGCTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACGGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAAATAAATAATT

mRNA sequence

AAGGGTTATTATGATAAGAGGGAAAAACGTAATTATGTAGAATTGACAAGGAGCTTAGAGTTTTTCAAACACAGTCCCCGACGAGCACTAACAATGGCGATGGCTTTCAAGATGGTAACTAATTTAACCACTTCACTCTTACGATCTCTTCTGTTTTTTTCTTTCTTGATTCTGATTCTGATTCCATTTCTTGACCCCGAATCTCAGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCCTTCATGGAGATGAAATGGAAGAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCGGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCGGTCTTCGATTTCGACTTCGTTACTGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTATCTTCCGCGATTCTTTGCTGTTTTTCCTCGATCGCATCTGCTCTTCATTCCTAGAATAATCATGAGTTCTGATCGTAAGCGGAATTCGAATTTGTCTAGAGAAACCCTAACCGATTATTTGAATCGAATACTGTCGCCCACCGAATCAAGAATCAGAGCTAAAATTCTATACGCAACTTCAAAGGATGGGCTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACGGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAAATAAATAATT

Coding sequence (CDS)

AAGGGTTATTATGATAAGAGGGAAAAACGTAATTATGTAGAATTGACAAGGAGCTTAGAGTTTTTCAAACACAGTCCCCGACGAGCACTAACAATGGCGATGGCTTTCAAGATGGTAACTAATTTAACCACTTCACTCTTACGATCTCTTCTGTTTTTTTCTTTCTTGATTCTGATTCTGATTCCATTTCTTGACCCCGAATCTCAGGCAACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCCTTCATGGAGATGAAATGGAAGAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCGGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCGGTCTTCGATTTCGACTTCGTTACTGTTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTATCTTCCGCGATTCTTTGCTGTTTTTCCTCGATCGCATCTGCTCTTCATTCCTAGAATAATCATGAGTTCTGATCGTAAGCGGAATTCGAATTTGTCTAGAGAAACCCTAACCGATTATTTGAATCGAATACTGTCGCCCACCGAATCAAGAATCAGAGCTAAAATTCTATACGCAACTTCAAAGGATGGGCTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACGGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAA

Protein sequence

KGYYDKREKRNYVELTRSLEFFKHSPRRALTMAMAFKMVTNLTTSLLRSLLFFSFLILILIPFLDPESQATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLSRETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK

Homology

[Close]

BLAST of CaUC02G037170 vs. NCBI nr
Match: XP_004147035.1 (actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin-depolymerizing factor 5-like [Cucumis melo] >KGN61924.1 hypothetical protein Csa_005919 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 7.2e-66
Identity = 136/181 (75.14%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA
Sbjct: 128 ------------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. NCBI nr
Match: XP_038901914.1 (actin-depolymerizing factor 5-like [Benincasa hispida])

HSP 1 Score: 260.4 bits (664), Expect = 1.6e-65
Identity = 135/181 (74.59%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMG+DVIKDRA
Sbjct: 128 ------------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGMDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. NCBI nr
Match: KAG6571025.1 (Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-65
Identity = 145/226 (64.16%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 25  SPRRALTMAMAFKMVTNLTTSLLRSLLFFSFLILILIPFLDPESQATTGMWVSDECKNSF 84
           S RR LTMAMAFKM                               ATTGMWVSDECKNSF
Sbjct: 617 SSRRDLTMAMAFKM-------------------------------ATTGMWVSDECKNSF 676

Query: 85  MEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVD 144
           MEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVD
Sbjct: 677 MEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVD 736

Query: 145 NCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLSRETLTDYLNRILSPT 204
           NCRKSKIFFIAW                                             SPT
Sbjct: 737 NCRKSKIFFIAW---------------------------------------------SPT 766

Query: 205 ESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 251
            SRIRAKILYATSK GLRRVLEGIHYEVQATDPTEMG+DVIKDRAK
Sbjct: 797 ASRIRAKILYATSKAGLRRVLEGIHYEVQATDPTEMGMDVIKDRAK 766

[Close]

BLAST of CaUC02G037170 vs. NCBI nr
Match: XP_022943996.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >KAG7010856.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.0 bits (650), Expect = 6.8e-64
Identity = 133/181 (73.48%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPTEMG+DVIKDRA
Sbjct: 128 ------------SPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPTEMGMDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. NCBI nr
Match: KAA0045728.1 (actin-depolymerizing factor 5-like [Cucumis melo var. makuwa] >TYJ99552.1 actin-depolymerizing factor 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-63
Identity = 132/177 (74.58%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 74  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 133
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60

Query: 134 AVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLSRETL 193
           AVFDFDFVTVDNCRKSKIFFIAW                                     
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAW------------------------------------- 120

Query: 194 TDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 251
                   SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 --------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 132

[Close]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-55
Identity = 115/181 (63.54%), Postives = 123/181 (67.96%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP D
Sbjct: 8   ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPTEMG D+I+DRA
Sbjct: 128 ------------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 3.3e-53
Identity = 105/181 (58.01%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL ASLP D
Sbjct: 6   ATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED 65

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFD+VTVDNCR SKIFFI W                                 
Sbjct: 66  DCRYAVFDFDYVTVDNCRMSKIFFITW--------------------------------- 125

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP  SRIR K++YATSK GLRRVL+G+HYE+QATDPTEMG D I+DRA
Sbjct: 126 ------------SPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 141

Query: 250 K 251
           K
Sbjct: 186 K 141

[Close]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.8e-51
Identity = 105/181 (58.01%), Postives = 119/181 (65.75%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           AT GM V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGGP E Y++L A+LP D
Sbjct: 8   ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNC+KSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCQKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPT SRIRAKILYATSK GLRRVL+G+HYEVQATD +EMG DVI+ RA
Sbjct: 128 ------------SPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 143

Query: 250 K 251
           +
Sbjct: 188 Q 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.1e-44
Identity = 89/180 (49.44%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           A++GM V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GGPAES+D+  A+LP +
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAV+DFDFVT +NC+KSKIFFIAW                                 
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP  SRIRAK+LYATSK+  RR L+G+HYE+QATDPTEM ++V+++RA
Sbjct: 128 ------------SPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERA 142

[Close]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41
Identity = 87/180 (48.33%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAV+DFDFVT +NC+KSKIFF AW                                 
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAW--------------------------------- 130

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP+ S IRAK+LY+TSKD L R L+GIHYE+QATDPTE+ ++V+++RA
Sbjct: 131 ------------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL
Match: A0A0A0LLM1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.5e-66
Identity = 136/181 (75.14%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA
Sbjct: 128 ------------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL
Match: A0A1S3C6R0 (actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.5e-66
Identity = 136/181 (75.14%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA
Sbjct: 128 ------------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL
Match: A0A6J1JEW6 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.3e-64
Identity = 133/181 (73.48%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPTEMG+DVIKDRA
Sbjct: 128 ------------SPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPTEMGMDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL
Match: A0A6J1FT84 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.3e-64
Identity = 133/181 (73.48%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND
Sbjct: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPTEMG+DVIKDRA
Sbjct: 128 ------------SPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPTEMGMDVIKDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL
Match: A0A5D3BIJ3 (Actin-depolymerizing factor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001220 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 132/177 (74.58%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 74  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 133
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60

Query: 134 AVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLSRETL 193
           AVFDFDFVTVDNCRKSKIFFIAW                                     
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAW------------------------------------- 120

Query: 194 TDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 251
                   SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 --------SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 132

[Close]

BLAST of CaUC02G037170 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-56
Identity = 115/181 (63.54%), Postives = 123/181 (67.96%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           ATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP D
Sbjct: 8   ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFDFVTVDNCRKSKIFFIAW                                 
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------- 127

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPTEMG D+I+DRA
Sbjct: 128 ------------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 143

Query: 250 K 251
           K
Sbjct: 188 K 143

[Close]

BLAST of CaUC02G037170 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-54
Identity = 105/181 (58.01%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL ASLP D
Sbjct: 6   ATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED 65

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAVFDFD+VTVDNCR SKIFFI W                                 
Sbjct: 66  DCRYAVFDFDYVTVDNCRMSKIFFITW--------------------------------- 125

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP  SRIR K++YATSK GLRRVL+G+HYE+QATDPTEMG D I+DRA
Sbjct: 126 ------------SPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 141

Query: 250 K 251
           K
Sbjct: 186 K 141

[Close]

BLAST of CaUC02G037170 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 208.4 bits (529), Expect = 6.8e-54
Identity = 111/177 (62.71%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 74  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 133
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 134 AVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLSRETL 193
           AVFDFDFVTVDNCRKSKIFFIAW                                     
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAW------------------------------------- 120

Query: 194 TDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 251
                   SP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPTEMG D+I+DRAK
Sbjct: 121 --------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRAK 132

[Close]

BLAST of CaUC02G037170 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 171.4 bits (433), Expect = 9.2e-43
Identity = 87/180 (48.33%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 70  ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 129
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 130 DCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSNLS 189
           DCRYAV+DFDFVT +NC+KSKIFF AW                                 
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAW--------------------------------- 130

Query: 190 RETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRA 249
                       SP+ S IRAK+LY+TSKD L R L+GIHYE+QATDPTE+ ++V+++RA
Sbjct: 131 ------------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of CaUC02G037170 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-40
Identity = 81/181 (44.75%), Postives = 112/181 (61.88%), Query Frame = 0


Query: 68  SQATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLP 127
           + + +GM V+DECK  F+E+K K+ +R+IVFKIDE ++ V ++K+G P E+YDD T+S+P
Sbjct: 2   ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query: 128 NDDCRYAVFDFDFVTVDNCRKSKIFFIAWYLPRFFAVFPRSHLLFIPRIIMSSDRKRNSN 187
           +D+CRYAV+DFDF T DNC+KSKIFFIAW                               
Sbjct: 62  DDECRYAVYDFDFTTEDNCQKSKIFFIAW------------------------------- 121

Query: 188 LSRETLTDYLNRILSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKD 247
                         SP  SR+R+K+LYA+SKD  +R +EGI  E+QATDP+EM +D+IK 
Sbjct: 122 --------------SPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKG 137

Query: 248 R 249
           R
Sbjct: 182 R 137

The following BLAST results are available for this feature:

BLAST of CaUC02G037170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147035.1	7.2e-66	75.14	actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin...	[more]
XP_038901914.1	1.6e-65	74.59	actin-depolymerizing factor 5-like [Benincasa hispida]	[more]
KAG6571025.1	6.1e-65	64.16	Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943996.1	6.8e-64	73.48	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-de...	[more]
KAA0045728.1	2.6e-63	74.58	actin-depolymerizing factor 5-like [Cucumis melo var. makuwa] >TYJ99552.1 actin-...	[more]

BLAST of CaUC02G037170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	2.7e-55	63.54	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
O49606	3.3e-53	58.01	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q10P87	6.8e-51	58.01	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
Q8SAG3	8.1e-44	49.44	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	1.3e-41	48.33	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of CaUC02G037170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM1	3.5e-66	75.14	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 ...	[more]
A0A1S3C6R0	3.5e-66	75.14	actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 ...	[more]
A0A6J1JEW6	3.3e-64	73.48	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 P...	[more]
A0A6J1FT84	3.3e-64	73.48	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560...	[more]
A0A5D3BIJ3	1.2e-63	74.58	Actin-depolymerizing factor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CaUC02G037170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16700.1	1.9e-56	63.54	actin depolymerizing factor 5	[more]
AT4G34970.1	2.3e-54	58.01	actin depolymerizing factor 9	[more]
AT2G16700.2	6.8e-54	62.71	actin depolymerizing factor 5	[more]
AT2G31200.1	9.2e-43	48.33	actin depolymerizing factor 6	[more]
AT4G00680.1	1.9e-40	44.75	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 78..250 e-value: 1.2E-30 score: 117.8
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 202..247 e-value: 4.6E-7 score: 29.6 coord: 80..156 e-value: 3.2E-16 score: 59.2
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 73..250 score: 21.479126
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 64..250 e-value: 5.4E-41 score: 142.0
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 51..156
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 202..250
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 72..249 e-value: 1.06714E-51 score: 162.726
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 202..250 coord: 51..156
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 64..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G037170.1	CaUC02G037170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding