CaUC02G036190 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G036190
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMitochondrial transcription termination factor family protein
LocationCiama_Chr02: 19258052 .. 19262690 (+)
RNA-Seq ExpressionCaUC02G036190
SyntenyCaUC02G036190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGGTAACACTCAAATCGTTAAACAGTTGCGGAATTTTCCTTTGTTCTTCTTTCTTTCATGGCATCGCAGGCCATTCATTTCTATTCAAAACGTAGAATGACCTCATATTCAATCATTTCCTTCTTCAACTACGCCTTATGCCGCCATTTCCCCTTGATTACTTTTCTGTATCTATTAGGGTTTAAATGGATTTCAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAATGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGAAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCCTTGATGTTGCTTCGGCCATTTCCAAATTTCCTTGCATGCTTTTTCATATCATGGAAGAGAAGCTTTGCCCACTTTTGGCTTTTTTTTCAGGCATTGGATATCCCTGAGAAGTAGCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTTTGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGGTTTTATGTAGGGATGCTAACAAAGTTTTGAGACCAATTTTGATTACCTAAAGAACTGTGGTTTTCAAGATGCGCAGATAGTAGCTATGGTGGCTGGTTATCCTCCTGTTTAAGCATTCTATAGAACCAGGGATCAATTTCTTGATAGAAGTTATGGGGAGAAGAATTGAAGAAGTTGCTGGTTATCCGGACTTCTTTCGACATGGTTTAAAGAAGAGGCTGGAGTTATGACACAAAATTTTGAAACAAAACGATATTGAGTGTAGTTTGAGTGAAATGCTGGATTGTAATCAAAACAAGTTTGTAATGAAGTTTGGTCTGTTAGATTTCCATTCTACAACATACTCTTGATTCTTCCCCTGCTCCTCCCTTACCGCAAATCAAAATTAGCTTTTCTGCACTATGTAGTTTGATTTTATAATGAGAAATAATTCGTCCACTGTATGGTTTCCTATATTTTTTGAATGATGAAGTTAAGAAACTCTAGTGGTTGGTTGGACAGTTAATTTCTTTCAAATTGTGTTTTATGTGAGCGTTTTTCTTCCTATACCTATTTTGCATTTTTTCCTTCGTATTTTTACTAATGGTTGCACGTCGAGATTTTTGGACTCATTTAAGCTGGAGAGAGCAATGATATTTGAAGTTCTGTCTTTTGTCAAATAGATCAGATTGAAGTTGGGACTTGTTATATTGGTTGCTTATTTATCATATTCATTTCATGCATTTAAGTAGTCTGTTGTTTAAGTAATCATTTAGTACAGAATCTATTATGGTTGGTTCTGTGACATTAAATAGTTATTGAATAGTTTACGAATGTGATAATTATCTCTTCTTTGTGGTGCATAGAGAAAATGTACCAAAGGGCACCATTCGCTTCTTAATTTTGTTTGAAATGTAGTTTAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTAGTTCCTATTCTTCTGCATGTACCAGAGAATTGTGAACAGAATTTAGGTTACTTGATACTGCAGTTTCCCTTTTCACTCTGACGTCAGACATTTCTTAGAGTAGTTTTATTTAAATTTGCATACACACACTACGCACGACGCTATTTTCTTGGAGGCTAATGCATGAACAAACATATATCACACACACAAGCAATTATTTAAACTGAAGACCCCTAACCTACATACATTATTAGTAATTTACAAACAAAATCAAGAATACATGATAGCCAACATTAGCATGATTGTTTGTGCCCTCATTTTACTTTTACTTTGATATGATGCCACCAATTACGGCTGCTACTATAGCTGTAGGGTCCCCGAGAATGGCCGAGACAATGGCACGAGCTGCAGTACCAGCCATCTGACCATACTTCTTGACTGTTCCTCTTGCCCCAGGACGATTTTGCAGTGATCCCTTGAGGCTTGGGATGGAAGTATGCATCTGCCTAACCTTATTCTTGTCCACATTGAAATATATGGCTTGCCAGCTTTCCACCAGCATCTCCTTCACACATGACAGATGAAGGTTGTAGGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCACAACTATTGCAGTGGTACACAAATCCATTAACATAAGTTCTACATGCATCACATACTCGCTTTCCTTTGCCAGGGGGATAATAGTATAATTTAAATTCACATTTTTCATAGAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGGTGAGTCATCTCTTTCTCAATCTTCATGTTCTTTGTTTTTCGTTTTTCGTTTTTCGTTTTTTTACTGTTCTTGCATTTTTGTTTCATATATTCAACTTATAAGGAGAGATTGTATTTATAAGGAGGTGAATTGGTAGCTACAAATTCATCCTGATTGGCTTCTGGAATACCTTGCAGGTAGATGCTTTGCTTAGCCTTTACGATCAGAGAATAGCTTTATTTAGTTGACATAATAAGTATTTGTTGGGGATCCAATAAAGGTTTGTAAAGAGAATCAGATGCCATTGAAGTACATTTTTTGACACCTATCAAATGCATCTTAGTTGAGTAGATCAATATATTCAACACTATATACAGTTTCAGTCAACTCTGCCAATTGGCTAATCAACTCTCGATTCTTGGGAATATGAAGGTATTGTCTGTAAACTCCTCTGCTTCCCTCTAGTCTAACTCAATTACTTTTGGTGATCACAACGAGCCCTCCCGGTGACCTGAAGAGCTTCGTATGTACACATCAAGTAAGTGAAATGGAAACAAAATTTCAATTTTAGTTTAGCTCACTGTTTCAGGGGAAGACTTATTGTTGATAATAGGGATGGAGGGCATGAAAGGGAAGGGACTATCGTTGGTGTTTCCCTTACTATGGAAGGCAAATAAAGGCAAATAAAGGCAGCAGTGTCCCACAGAATCTGGGTTACTCAATGAAAAGGAGGTACTGTTTTTGGATTGTAGCAACTCCTTGTCAAAACAAAAGAATTGAGCAAGTGGATCTATAAGTTGGGGTTTTGGTGCCTTCCGTAAACAAAATAAAAAGAAAAAGAAAAATATCTTTTTAGTCCTTAGGTTTTTGGTATAATTTCTATTTGGTCCCTATTTAGTCTTTTGGTTTCAAAATGTTACAATTTTACCCTTAATATTTGAGTTTTGTTTCAATTTGGTCTCTAGATTATAAAATTTACATTTTTTAACCTTTATTTTTCACTAAATACTCATTTTTCATCTTTAGTGTTAATGTAGGTTAATACATTTAAAATAATTAACTTAATTATAATTAATTAAGTCTCACTATTTTTCATCACTTTTGAAATAAAATTAAAAAAATTTACTTTATAATTACTTTTAATCAATTTATAGACATTGACTTCAATGATTGAAAGTGGATTTTTAATGAAAAATTGAGGTTAAAATGTAAAATCTTGAAATCTAGGAACCAAATTGAAACAAAACTAAAATCTCACGGGTAAAATTGTCATATTTTGAAATTGAGGAACTAAATTAAAACCAAAATCAAAACTTAAGGACTAAATGTGTAACATCTTAAAACGTAAAGACTAAATTGAAACTAGATTAAAAATTTAGAGACCAAAAATGTATTTTTCCGTAAAAAGAATTAGAATATTCTTGTATAGACCACTGTCTATTGCTTTTCTTGCAGATACACATTGCTGGATTCTGGTGATGATATACTGCTATTATTCCTTTAGGTTTCATATGTTACTTGATATTATATTCAGATTAAGAATTACTTTTAGAGCATAGTTTATATGCACTCATCGATCAGTTCTCATTAGGGATTTGTAGTTAATGTATGAATGTAGATGTTCAATCAATTTTGTTCAAGAAAAAAGAAATAAATGATGACCAATTAAAAAAAAAAATAATAATAAAGAAATAAATTCAACTAAGTTACTTTGATGGTTACGTTCAGGTTCATGGATATGGTTTTTGGTAAGAGAAAGAATCTAAGACAAATATACATATGATTAGAATACTAAAATTTAACATTTATGGATAAGATGGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

mRNA sequence

ATGCTAAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAATGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGAAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCCTTGATCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTTTGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCACAACTATTGCAGTGGTACACAAATCCATTAACATAAAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGATGGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

Coding sequence (CDS)

ATGCTAAGCGCCAGTCAACATGGTACCACTATCCTGTGGTTCTTCAGGAGTAATGGGTTCGAGGAAAAAGGCATCCACGAAATGTTCACAAAGTGCAAATGGTTTGAAGGTACGCATAAAGAAATTGCCTCTGAAAACTGGGATTACTTGAAAAATATTGGAATTCAAGAGAGAAAGCTCCGTTACATGGTTTCCAAGTACCCCAAAATTCTTACCATTTGTCTGAATGGGAAGCTTGTTCCCATGGTCGAGTGCCTTGCAACTCTGGGTACTAAGCCCCTTGATCCTGGGAAGACGATTTTGCTTAATCCCAGGCTTATTAGCTACAGCATTGTGCCGAAACTTTCTGAGATTGTGGACTTTCTTGCTAGTTTTGGCCTTGATAAGGAAGGGATGATTGGCAAAGTTTTGGTAAAATATCCATTTCTTTTGGGGTATAGTGTCGATAAAAGGCAACGTCCTACATTAGAGTTTCTGAAATCTATGGGTTTGAAGGATGTTGATGTTCAAGCAGTTGCAGTTGGCTACCCTGAGACATCAGTATTCAAGACCACCATTCTCGATTATACTCTCAATACGCTTGAACGTTTTGCACTGCGACCTGTAAGACCAACCGAGTCCCTTCCCACCGCAGCTGTGACACGAGCTCGAGAGCTTGTTACACAGGTAAAGATTGTGTTTTCCATCGTCAAGGACTTGTGGGAGGTTTGCACAACAAGGATGCAGATCGAAGTCACAACTATTGCAGTGGTACACAAATCCATTAACATAAAAAGGATGGGTGATTCTGGGGGCACCAACGGCACAAACCTTGTGCAAGTTGAAGCCACATTGCTGGCACTTGTATTTGTAGCCTATACCAGCTTCCTTGCACCCATCACAGTTGTAGGGGATCTCTGTGTACTCGAGCCTCAGCTTGTGTCGTGGGTGCATTGGATGGGATTGGATGCCATGGAAGAATACAATCGTACTCTTGCTATCAATTAA

Protein sequence

MLSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDVDVQAVAVGYPETSVFKTTILDYTLNTLERFALRPVRPTESLPTAAVTRARELVTQVKIVFSIVKDLWEVCTTRMQIEVTTIAVVHKSINIKRMGDSGGTNGTNLVQVEATLLALVFVAYTSFLAPITVVGDLCVLEPQLVSWVHWMGLDAMEEYNRTLAIN
Homology
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BLAST of CaUC02G036190 vs. NCBI nr
Match: XP_031744171.1 (LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 5.6e-58
Identity = 128/207 (61.84%), Postives = 142/207 (68.60%), Query Frame = 0 

Query: 8   GTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRYMVSKY 67
           G   LWFF S GFEEK I +   KCK  EG   EIAS+NWDYLKNIGI ER+LR+M SKY
Sbjct: 173 GARRLWFFWSKGFEEKSISKCSQKCKQLEGMPXEIASQNWDYLKNIGIHERQLRHMFSKY 232

Query: 68  PKILTICLNGKLVPMVECLATLGTKP---------------------LDP---------- 127
           PKILTICLNG LV MVECLATLG+ P                     L P          
Sbjct: 233 PKILTICLNGXLVLMVECLATLGSHPHEFASAVAQFPYMLFHSMEDKLCPRLAFFQALDI 292

Query: 128 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKR 179
                GK ILLNPRLI YSIVPKL+EIVDF A+FGLDK+G+I KVLVKYPFL+GYSVDK 
Sbjct: 293 PEKLLGKMILLNPRLIRYSIVPKLTEIVDFHANFGLDKQGLIDKVLVKYPFLMGYSVDKT 352

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BLAST of CaUC02G036190 vs. NCBI nr
Match: XP_021301114.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Herrania umbratica])

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-56
Identity = 124/213 (58.22%), Postives = 147/213 (69.01%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCK  +G  KE ASENW YLK+IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKETASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK                        PL   
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVAYAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI  KL+EIVDFLAS GL +EGMIGKVL KYPF++G
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLASLGLTREGMIGKVLSKYPFIMG 182

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BLAST of CaUC02G036190 vs. NCBI nr
Match: EOX98953.1 (Mitochondrial transcription termination factor family protein [Theobroma cacao])

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-56
Identity = 123/213 (57.75%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCK  +G  KE ASENW YLK+IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK                        PL   
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL KYPF++G
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMG 182

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BLAST of CaUC02G036190 vs. NCBI nr
Match: OMO72115.1 (Mitochodrial transcription termination factor-related protein [Corchorus capsularis])

HSP 1 Score: 229.6 bits (584), Expect = 4.0e-56
Identity = 123/212 (58.02%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 3   SASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRY 62
           ++SQ+G++I+WFFR  GF++K I+EMF KCK  EG  KE ASENW YLK+IGIQERKL  
Sbjct: 4   ASSQNGSSIMWFFRDKGFDDKSINEMFKKCKRLEGAQKERASENWSYLKSIGIQERKLPS 63

Query: 63  MVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL---- 122
           +VS+ PKILT  LN KLVPMVECLATLGTK                        PL    
Sbjct: 64  VVSRCPKILTFGLNEKLVPMVECLATLGTKRREVASAIVRFPHIMSHSVEEKLCPLLAFF 123

Query: 123 --------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGY 179
                     GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL +YPF++GY
Sbjct: 124 QALGVPEKQLGKMILLNPRLISYSIDSKLTEIVDFLATLGLAREGMIGKVLARYPFIMGY 183

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BLAST of CaUC02G036190 vs. NCBI nr
Match: XP_021636168.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Hevea brasiliensis] >XP_021636169.1 transcription termination factor MTERF6, chloroplastic/mitochondrial [Hevea brasiliensis] >KAF2314600.1 hypothetical protein GH714_027869 [Hevea brasiliensis])

HSP 1 Score: 228.8 bits (582), Expect = 6.8e-56
Identity = 119/213 (55.87%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           L+++ + ++ILWFFR  GF++K IHE+F KCK  E   KE ASENW YLK+IGIQER+L 
Sbjct: 3   LASTSNASSILWFFRDRGFDDKSIHELFRKCKRLEDIQKERASENWSYLKSIGIQERRLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
           Y++SK PKILT+ LN KL+PMVECLATL TK                        PL   
Sbjct: 63  YVISKCPKILTLGLNEKLIPMVECLATLATKRREVASAITKFPHILSHSLEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI PKL+EIVDFLA  GL+K+GMIGKVLVK+PF++G
Sbjct: 123 FQALGVPEKQLGKIILLNPRLISYSINPKLTEIVDFLAGLGLNKDGMIGKVLVKHPFIMG 182

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BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-47
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK  E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKPLDP------------------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P +                                
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFL+GYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-11
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 0 

Query: 48  DYLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLI 107
           ++L ++GI +  +  ++ K P+I  I L   L P +  L TLG       K I   P ++
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296

Query: 108 SYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDV 167
           +YS   KL+  V+FL+  GL +E  IG++L + P ++ YSV+ + RPT+E+ +S+   +V
Sbjct: 297 TYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NV 356

Query: 168 DVQAVAVGYPET 180
           DV  +    P+T
Sbjct: 357 DVAVLLHRCPQT 363

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BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07
Identity = 39/167 (23.35%), Postives = 70/167 (41.92%), Query Frame = 0 

Query: 11  ILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRYMVSKYPKI 70
           I+ +  SNG     +  +  +C        E      D+   +G+ +     MV  YPKI
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKI 343

Query: 71  LTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKE 130
           +       +   +  L   G    + G+ +   P L+  SI  +   +V +    G+ KE
Sbjct: 344 IGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKE 403

Query: 131 GMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDVDVQAVAVGYP 178
           GM  ++LV  P L    ++K   P + FL+ MG+ +  +  + V +P
Sbjct: 404 GM-KRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFP 449

[Close]
BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.1e-07
Identity = 28/130 (21.54%), Postives = 65/130 (50.00%), Query Frame = 0 

Query: 49  YLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLIS 108
           YL+ + ++   +  ++ +YP++L   L G +   V  L  +G      G  I   P ++ 
Sbjct: 177 YLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLG 236

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +   V+ L   GL +   I +++ K P++LG+ + ++ +P +E L  +G++   
Sbjct: 237 MRVGKIIKPFVEHLEGIGLQRLA-IARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEA 296

Query: 169 VQAVAVGYPE 179
           + ++ + YP+
Sbjct: 297 LASIVMQYPD 305

[Close]
BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-06
Identity = 26/130 (20.00%), Postives = 64/130 (49.23%), Query Frame = 0 

Query: 49  YLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLIS 108
           YL+ + I+   +  ++ +YP++L   L G +   V  L  +G    + G  +   P ++ 
Sbjct: 221 YLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILG 280

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +  +V++L   G+ +     +++ K P +LG+ +D   +P ++ L+   +++  
Sbjct: 281 MRVARIIKPLVEYLEVLGIPRLA-AARLIEKRPHILGFELDDTVKPNVQILQDFNVRETS 340

Query: 169 VQAVAVGYPE 179
           + ++   YPE
Sbjct: 341 LPSIIAQYPE 349

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BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match: A0A6J1BSC3 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Herrania umbratica OX=108875 GN=LOC110429412 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 8.7e-57
Identity = 124/213 (58.22%), Postives = 147/213 (69.01%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCK  +G  KE ASENW YLK+IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKETASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK                        PL   
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVAYAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI  KL+EIVDFLAS GL +EGMIGKVL KYPF++G
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLASLGLTREGMIGKVLSKYPFIMG 182

[Close]
BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match: A0A061E9I9 (Mitochondrial transcription termination factor family protein OS=Theobroma cacao OX=3641 GN=TCM_007613 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-56
Identity = 123/213 (57.75%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           +++SQ+G++I+WFFR  GF++K I+EMF KCK  +G  KE ASENW YLK+IGIQERKL 
Sbjct: 3   VASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
            +VS+ PKILT+ LN KLVPMVECLATLGTK                        PL   
Sbjct: 63  SVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL KYPF++G
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMG 182

[Close]
BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match: A0A1R3HP25 (Mitochodrial transcription termination factor-related protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17938 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.9e-56
Identity = 123/212 (58.02%), Postives = 146/212 (68.87%), Query Frame = 0 

Query: 3   SASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRY 62
           ++SQ+G++I+WFFR  GF++K I+EMF KCK  EG  KE ASENW YLK+IGIQERKL  
Sbjct: 4   ASSQNGSSIMWFFRDKGFDDKSINEMFKKCKRLEGAQKERASENWSYLKSIGIQERKLPS 63

Query: 63  MVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL---- 122
           +VS+ PKILT  LN KLVPMVECLATLGTK                        PL    
Sbjct: 64  VVSRCPKILTFGLNEKLVPMVECLATLGTKRREVASAIVRFPHIMSHSVEEKLCPLLAFF 123

Query: 123 --------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGY 179
                     GK ILLNPRLISYSI  KL+EIVDFLA+ GL +EGMIGKVL +YPF++GY
Sbjct: 124 QALGVPEKQLGKMILLNPRLISYSIDSKLTEIVDFLATLGLAREGMIGKVLARYPFIMGY 183

[Close]
BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match: A0A5B6Z9F0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.3e-56
Identity = 119/211 (56.40%), Postives = 143/211 (67.77%), Query Frame = 0 

Query: 4   ASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLRYM 63
           ++ H  +++WFF+  GF++K I EMF KCK  EG  KE ASENW YL +IGIQERK+  +
Sbjct: 4   SNSHNASLMWFFKDRGFDDKNIREMFKKCKRLEGVQKERASENWTYLTSIGIQERKIPSL 63

Query: 64  VSKYPKILTICLNGKLVPMVECLATLGTKPLDP--------------------------- 123
           VSK PKILTI LN KLVPMV+CLATLGTKP +                            
Sbjct: 64  VSKCPKILTIGLNEKLVPMVQCLATLGTKPSEVASAITKFPQILSHSVEEKLCPLLAFFQ 123

Query: 124 ---------GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYS 179
                    GK +LLNPR+ISYSI  KLS+IVDFLAS GL KEGMIGKVLVKYPF++GYS
Sbjct: 124 ALGVPEKQLGKMLLLNPRIISYSIESKLSKIVDFLASLGLTKEGMIGKVLVKYPFIMGYS 183

[Close]
BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match: A0A6A6MLL1 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_027869 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.3e-56
Identity = 119/213 (55.87%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 2   LSASQHGTTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNIGIQERKLR 61
           L+++ + ++ILWFFR  GF++K IHE+F KCK  E   KE ASENW YLK+IGIQER+L 
Sbjct: 3   LASTSNASSILWFFRDRGFDDKSIHELFRKCKRLEDIQKERASENWSYLKSIGIQERRLP 62

Query: 62  YMVSKYPKILTICLNGKLVPMVECLATLGTK------------------------PL--- 121
           Y++SK PKILT+ LN KL+PMVECLATL TK                        PL   
Sbjct: 63  YVISKCPKILTLGLNEKLIPMVECLATLATKRREVASAITKFPHILSHSLEEKLCPLLAF 122

Query: 122 ---------DPGKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLG 179
                      GK ILLNPRLISYSI PKL+EIVDFLA  GL+K+GMIGKVLVK+PF++G
Sbjct: 123 FQALGVPEKQLGKIILLNPRLISYSINPKLTEIVDFLAGLGLNKDGMIGKVLVKHPFIMG 182

[Close]
BLAST of CaUC02G036190 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK  E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKPLDP------------------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P +                                
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFL+GYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CaUC02G036190 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK  E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKPLDP------------------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P +                                
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFL+GYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CaUC02G036190 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 0 

Query: 9   TTILWFFRSNGFEEKGIHEMFTKCKWFEGTHKEIASENWDYLKNI-GIQERKLRYMVSKY 68
           ++I+WFFR  GF++  I +M  KCK  E    ++ASENWDYL NI GIQERKL Y+VS+ 
Sbjct: 7   SSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRC 66

Query: 69  PKILTICLNGKLVPMVECLATLGTKPLDP------------------------------- 128
           PKILT+ L+ +L+PMVECL++LG  P +                                
Sbjct: 67  PKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGV 126

Query: 129 -----GKTILLNPRLISYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKR 179
                GK IL NPRLISYSI  KL+ IV FLAS GLD++GMIGKVLVK PFL+GYSVDKR
Sbjct: 127 PETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKR 186

[Close]
BLAST of CaUC02G036190 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-13
Identity = 35/130 (26.92%), Postives = 74/130 (56.92%), Query Frame = 0 

Query: 49  YLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLIS 108
           +L+ + ++++ L Y++ KYP++L   L G +   V  L ++G  P D G  +   P L+ 
Sbjct: 186 FLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLG 245

Query: 109 YSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDVD 168
             +   +  +VD+L S GL K+ ++ ++L K  +++GY++++  +P ++ L S G+K   
Sbjct: 246 MRVGTMIKPLVDYLISIGLPKK-IVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKEL 305

Query: 169 VQAVAVGYPE 179
           +  +   YP+
Sbjct: 306 LPLLIAQYPQ 314

[Close]
BLAST of CaUC02G036190 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-12
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 0 

Query: 48  DYLKNIGIQERKLRYMVSKYPKILTICLNGKLVPMVECLATLGTKPLDPGKTILLNPRLI 107
           ++L ++GI +  +  ++ K P+I  I L   L P +  L TLG       K I   P ++
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296

Query: 108 SYSIVPKLSEIVDFLASFGLDKEGMIGKVLVKYPFLLGYSVDKRQRPTLEFLKSMGLKDV 167
           +YS   KL+  V+FL+  GL +E  IG++L + P ++ YSV+ + RPT+E+ +S+   +V
Sbjct: 297 TYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NV 356

Query: 168 DVQAVAVGYPET 180
           DV  +    P+T
Sbjct: 357 DVAVLLHRCPQT 363

The following BLAST results are available for this feature:
BLAST of CaUC02G036190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744171.15.6e-5861.84LOW QUALITY PROTEIN: transcription termination factor MTERF6, chloroplastic/mito... [more]
XP_021301114.11.8e-5658.22transcription termination factor MTERF6, chloroplastic/mitochondrial [Herrania u... [more]
EOX98953.13.1e-5657.75Mitochondrial transcription termination factor family protein [Theobroma cacao][more]
OMO72115.14.0e-5658.02Mitochodrial transcription termination factor-related protein [Corchorus capsula... [more]
XP_021636168.16.8e-5655.87transcription termination factor MTERF6, chloroplastic/mitochondrial [Hevea bras... [more]
BLAST of CaUC02G036190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL61.6e-4750.00Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4JVI34.1e-1133.33Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL31.2e-0723.35Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
B6TGN46.1e-0721.54Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT... [more]
Q9ZT961.0e-0620.00Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of CaUC02G036190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BSC38.7e-5758.22transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Herrania... [more]
A0A061E9I91.5e-5657.75Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
A0A1R3HP251.9e-5658.02Mitochodrial transcription termination factor-related protein OS=Corchorus capsu... [more]
A0A5B6Z9F03.3e-5656.40Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009937 PE=3 SV=1[more]
A0A6A6MLL13.3e-5655.87Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_027869 PE=3 SV=1[more]
BLAST of CaUC02G036190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38160.11.1e-4850.00Mitochondrial transcription termination factor family protein [more]
AT4G38160.21.1e-4850.00Mitochondrial transcription termination factor family protein [more]
AT4G38160.31.1e-4850.00Mitochondrial transcription termination factor family protein [more]
AT2G44020.14.5e-1326.92Mitochondrial transcription termination factor family protein [more]
AT4G14605.12.9e-1233.33Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 97..128
e-value: 0.13
score: 21.3
coord: 61..92
e-value: 34.0
score: 13.3
coord: 134..165
e-value: 1.1E-7
score: 41.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 11..195
e-value: 2.9E-18
score: 65.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 50..178
coord: 10..93
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 2..130
e-value: 8.7E-15
score: 56.5
NoneNo IPR availablePANTHERPTHR13068:SF5TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIALcoord: 50..178
coord: 10..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G036190.1CaUC02G036190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0003690 double-stranded DNA binding