CaUC02G033840 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G033840
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr02: 10169979 .. 10170335 (+)
RNA-Seq ExpressionCaUC02G033840
SyntenyCaUC02G033840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACAATCTAGTGAAGAGGGTGTTGAACCTCTTCCTAAGACATCTGAAATGGTTGAACCTGGAAGTGGTCTTGATGACACTATTGACAACTCTAAGGTTACTGAGGATAAAAAAATTGAGGTTGCTGATGTTTTTGAGAGTGCTACTAGCCAAGAGATTTTTTAAGAAGTTCCTGGCACAACTCAAGATGATGAAGTTGCATCTAATGAAGATCGTGACGATGATTCTCCCTCGAGTAATCTACAGTCAAAGAAAAATGAAGATGTTAATGATGATGCCAATGCTTCTCCTATGACATTAGATCATGAATTTGAAAATTTTGAAAAATCTCCCTCTAAAAAAGCATCTGATTGA

mRNA sequence

ATGTTACAATCTAGTGAAGAGGGTGTTGAACCTCTTCCTAAGACATCTGAAATGGTTGAACCTGGAAGTGGTCTTGATGACACTATTGACAACTCTAAGGTTACTGAGGATAAAAAAATTGAGGTTGCTGATGTTTTTGAGAAAGTTCCTGGCACAACTCAAGATGATGAAGTTGCATCTAATGAAGATCGTGACGATGATTCTCCCTCGAGTAATCTACAGTCAAAGAAAAATGAAGATGTTAATGATGATGCCAATGCTTCTCCTATGACATTAGATCATGAATTTGAAAATTTTGAAAAATCTCCCTCTAAAAAAGCATCTGATTGA

Coding sequence (CDS)

ATGTTACAATCTAGTGAAGAGGGTGTTGAACCTCTTCCTAAGACATCTGAAATGGTTGAACCTGGAAGTGGTCTTGATGACACTATTGACAACTCTAAGGTTACTGAGGATAAAAAAATTGAGGTTGCTGATGTTTTTGAGAAAGTTCCTGGCACAACTCAAGATGATGAAGTTGCATCTAATGAAGATCGTGACGATGATTCTCCCTCGAGTAATCTACAGTCAAAGAAAAATGAAGATGTTAATGATGATGCCAATGCTTCTCCTATGACATTAGATCATGAATTTGAAAATTTTGAAAAATCTCCCTCTAAAAAAGCATCTGATTGA

Protein sequence

MLQSSEEGVEPLPKTSEMVEPGSGLDDTIDNSKVTEDKKIEVADVFEKVPGTTQDDEVASNEDRDDDSPSSNLQSKKNEDVNDDANASPMTLDHEFENFEKSPSKKASD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G033840.1CaUC02G033840.1mRNA