CaUC02G033670 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G033670
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr02: 9720266 .. 9720984 (-)
RNA-Seq Expression	CaUC02G033670
Synteny	CaUC02G033670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTTCGCCCCCATGTCGCCACACGGGAGGGACACGGGGACGTAAAAAAGGGGATCCTATCAACTTGTTCCGACCTAGGATAATAAGCTCATGAGCTTAGTCTTACTTCACCGTCGAGAAACGAAAGAAGACTTCCATCTCCAAGTTTAACTCAGACGTAGCTCGCTTCTTTTTGGGTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGCCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGGGATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCTGCTCAGGGTTCCAACCTCAACGGTTGGCAACTAAACACGAGGGTTGCGCTCGTTGCGGGACTTAA

mRNA sequence

ATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTTCGCCCCCATGTCGCCACACGGGAGGGACACGGGGACTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCACACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCTGCTCAGGGTTCCAACCTCAACGGTTGGCAACTAAACACGAGGGTTGCGCTCGTTGCGGGACTTAA

Coding sequence (CDS)

ATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTTCGCCCCCATGTCGCCACACGGGAGGGACACGGGGACTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCACACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCTGCTCAGGGTTCCAACCTCAACGGTTGGCAACTAAACACGAGGGTTGCGCTCGTTGCGGGACTTAA

Protein sequence

MPKARETPSLSFLFSPPCRHTGGTRGLSNQNTQQALALPEKEVIQPHLPHVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQPQRLATKHEGCARCGT

Homology

[Close]

BLAST of CaUC02G033670 vs. NCBI nr
Match: QCE10629.1 (hypothetical protein DEO72_LG10g1860 [Vigna unguiculata])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 31  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 90

[Close]

BLAST of CaUC02G033670 vs. NCBI nr
Match: QCD96519.1 (hypothetical protein DEO72_LG6g1223 [Vigna unguiculata])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 22  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 81

[Close]

BLAST of CaUC02G033670 vs. NCBI nr
Match: QCE13754.1 (hypothetical protein DEO72_LG11g752 [Vigna unguiculata])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 16  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 75

[Close]

BLAST of CaUC02G033670 vs. NCBI nr
Match: KAF1855122.1 (hypothetical protein Lal_00044196 [Lupinus albus])

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-10
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 50 HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQPQR 84
          HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQ QR
Sbjct: 50 HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQTQR 83

[Close]

BLAST of CaUC02G033670 vs. NCBI nr
Match: KAA0068048.1 (hypothetical protein E6C27_scaffold138G002460 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 8.2e-10
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 50  HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQPQRLA 86
           HVCRPGHKGHDDLTSSSPSSGLSPAV SGFQPQR A
Sbjct: 87  HVCRPGHKGHDDLTSSSPSSGLSPAVSSGFQPQRHA 122

[Close]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL
Match: A0A4D6M576 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g1223 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.1e-11
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 22  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 81

[Close]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL
Match: A0A4D6NDK3 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g1860 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.1e-11
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 31  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 90

[Close]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL
Match: A0A4D6NM60 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g752 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.1e-11
Identity = 49/117 (41.88%), Postives = 49/117 (41.88%), Query Frame = 0


Query: 30  QNTQQALALPEKEVIQPHLP---------------------------------------- 82
           Q TQQALALPEKEVIQPHLP                                        
Sbjct: 16  QTTQQALALPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGV 75

[Close]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL
Match: A0A6A5L917 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00044196 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.0e-10
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 50 HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQPQR 84
          HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQ QR
Sbjct: 50 HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQTQR 83

[Close]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL
Match: A0A5A7VJP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002460 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-10
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 50  HVCRPGHKGHDDLTSSSPSSGLSPAVCSGFQPQRLA 86
           HVCRPGHKGHDDLTSSSPSSGLSPAV SGFQPQR A
Sbjct: 87  HVCRPGHKGHDDLTSSSPSSGLSPAVSSGFQPQRHA 122

The following BLAST results are available for this feature:

BLAST of CaUC02G033670 vs. NCBI nr


Match Name	E-value	Identity	Description
QCE10629.1	1.3e-10	41.88	hypothetical protein DEO72_LG10g1860 [Vigna unguiculata]	[more]
QCD96519.1	1.3e-10	41.88	hypothetical protein DEO72_LG6g1223 [Vigna unguiculata]	[more]
QCE13754.1	1.3e-10	41.88	hypothetical protein DEO72_LG11g752 [Vigna unguiculata]	[more]
KAF1855122.1	6.3e-10	97.06	hypothetical protein Lal_00044196 [Lupinus albus]	[more]
KAA0068048.1	8.2e-10	94.44	hypothetical protein E6C27_scaffold138G002460 [Cucumis melo var. makuwa]	[more]

BLAST of CaUC02G033670 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G033670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D6M576	6.1e-11	41.88	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g1223 PE=4 SV=1	[more]
A0A4D6NDK3	6.1e-11	41.88	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g1860 PE=4 SV=...	[more]
A0A4D6NM60	6.1e-11	41.88	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g752 PE=4 SV=1	[more]
A0A6A5L917	3.0e-10	97.06	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00044196 PE=4 SV=1	[more]
A0A5A7VJP9	4.0e-10	94.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CaUC02G033670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G033670.1	CaUC02G033670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0031419	cobalamin binding
molecular_function	GO:0046872	metal ion binding