CaUC02G033500 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G033500
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	50S ribosomal protein L2, chloroplastic
Location	Ciama_Chr02: 9665631 .. 9667576 (-)
RNA-Seq Expression	CaUC02G033500
Synteny	CaUC02G033500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGGTATATTCATATCATAACATATGAACAGTAAGAACTAGCATTCTTATTGAGACTCGAACTCATAGGGAAGAAAATTTATGGATGGAATCAAATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAGCATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCAGAAGCGTCCCTTGTTTCAAAGAGAGCAGGACGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCCGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGTACGATATATATAAGATCCATATGTATAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

mRNA sequence

ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGTATTTACAGACAAAAGTATTCGGTTATTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Coding sequence (CDS)

ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGTATTTACAGACAAAAGTATTCGGTTATTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Protein sequence

MGPSNKSIGIGSVSMESHHPYITNWCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Homology

[Close]

BLAST of CaUC02G033500 vs. NCBI nr
Match: BBN69974.1 (hypothetical protein Prudu_1306S000300, partial [Prunus dulcis])

HSP 1 Score: 598.6 bits (1542), Expect = 3.4e-167
Identity = 308/368 (83.70%), Postives = 311/368 (84.51%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------- 84
           + VFTDKSIRLLGKNQYTSNVESGSTRTEIKHW ELFFGVK                   
Sbjct: 6   YAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWFELFFGVKKNGTYYGTYNALQTYDHYA 65

Query: 85  -----------------------------------HRCGKGRNARGIITAGHRGGGHKRL 144
                                              HRCGKGRNARGIITAGHRGGGHKRL
Sbjct: 66  STGMAIHLYKTSTPSTRNGAVDSQSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRL 125

Query: 145 YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE 204
           YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE
Sbjct: 126 YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE 185

Query: 205 VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 264
           VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 186 VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 245

Query: 265 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 324
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+
Sbjct: 246 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGK 305

Query: 325 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 339
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 306 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 365

[Close]

BLAST of CaUC02G033500 vs. NCBI nr
Match: KAF6138377.1 (hypothetical protein GIB67_037667 [Kingdonia uniflora] >KAF6143161.1 hypothetical protein GIB67_033923 [Kingdonia uniflora] >KAF6145483.1 hypothetical protein GIB67_020732 [Kingdonia uniflora] >KAF6174444.1 hypothetical protein GIB67_030552 [Kingdonia uniflora])

HSP 1 Score: 597.8 bits (1540), Expect = 5.8e-167
Identity = 299/313 (95.53%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 27  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGG 86
           VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK  CGKGRNARGIIT  HRGGG
Sbjct: 8   VFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKRHCGKGRNARGIITVRHRGGG 67

Query: 87  HKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV 146
           HKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV
Sbjct: 68  HKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV 127

Query: 147 SGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHN 206
           SGTEVPI MGNALPLSAISS TSRKPYALEEACTVWEGVLIDQKEESTST+MPLGTAIHN
Sbjct: 128 SGTEVPISMGNALPLSAISSYTSRKPYALEEACTVWEGVLIDQKEESTSTNMPLGTAIHN 187

Query: 207 IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQK 266
           IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQK
Sbjct: 188 IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQK 247

Query: 267 SLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN 326
           SLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALG+RSRKRN
Sbjct: 248 SLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGKRSRKRN 307

Query: 327 KYSDNLILRRRSK 340
           KYSD+LILRRRSK
Sbjct: 308 KYSDSLILRRRSK 320

[Close]

BLAST of CaUC02G033500 vs. NCBI nr
Match: KAG6735406.1 (hypothetical protein POTOM_062054 [Populus tomentosa])

HSP 1 Score: 597.0 bits (1538), Expect = 9.8e-167
Identity = 300/317 (94.64%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRG 84
           + V TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITA HRG
Sbjct: 6   YAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITARHRG 65

Query: 85  GGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT 144
           GGHKRLYRKIDFRRNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT
Sbjct: 66  GGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT 125

Query: 145 IVSGTEVPIKMGNALPLSA--ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 204
           I+SGTEVPIKMGNALPLSA      T  KPYALEEACTVWE VLIDQKEESTSTDMPLGT
Sbjct: 126 IISGTEVPIKMGNALPLSADRPQQKTEEKPYALEEACTVWEEVLIDQKEESTSTDMPLGT 185

Query: 205 AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAG 264
           AIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAG
Sbjct: 186 AIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAG 245

Query: 265 VNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS 324
           VNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS
Sbjct: 246 VNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS 305

Query: 325 RKRNKYSDNLILRRRSK 340
           RKRNKYSDNLILRRRSK
Sbjct: 306 RKRNKYSDNLILRRRSK 322

[Close]

BLAST of CaUC02G033500 vs. NCBI nr
Match: KAG6758775.1 (hypothetical protein POTOM_035235 [Populus tomentosa])

HSP 1 Score: 596.3 bits (1536), Expect = 1.7e-166
Identity = 300/315 (95.24%), Postives = 304/315 (96.51%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRG 84
           + V TDKSIRLL KNQYTSNVESGSTRTEIKH VELFFGVKHRCGKGRNARGIITA HRG
Sbjct: 6   YAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHGVELFFGVKHRCGKGRNARGIITARHRG 65

Query: 85  GGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT 144
           GGHKRLYRKIDFRRNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT
Sbjct: 66  GGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDT 125

Query: 145 IVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAI 204
           I+SGTEVPIKMGNALPLSAISSST RKPYALEEACTVWE VLIDQKEESTSTD+PLGTAI
Sbjct: 126 IISGTEVPIKMGNALPLSAISSSTPRKPYALEEACTVWEEVLIDQKEESTSTDIPLGTAI 185

Query: 205 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN 264
           HNIEITLG+GGQLARA GAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN
Sbjct: 186 HNIEITLGRGGQLARAVGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN 245

Query: 265 QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRK 324
           QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG GEGRA IGRKKPATPWGYPALGRRSRK
Sbjct: 246 QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGDGEGRALIGRKKPATPWGYPALGRRSRK 305

Query: 325 RNKYSDNLILRRRSK 340
           RNKYSDNLILRRRSK
Sbjct: 306 RNKYSDNLILRRRSK 320

[Close]

BLAST of CaUC02G033500 vs. NCBI nr
Match: RZC57988.1 (hypothetical protein C5167_005297 [Papaver somniferum])

HSP 1 Score: 559.3 bits (1440), Expect = 2.3e-155
Identity = 300/401 (74.81%), Postives = 303/401 (75.56%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR----------- 84
           + VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK      HR           
Sbjct: 6   YAVFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPM 65

Query: 85  ------------------------------------------------------------ 144
                                                                       
Sbjct: 66  GHTMHYKRMIITLQPGYSIPPLRKKKLKKKILNNTAIHLYKTSTPSTRNGAVDSQVKSNS 125

Query: 145 -----------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNR 204
                      CGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNR
Sbjct: 126 RNNLISGQQRHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNR 185

Query: 205 NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALE 264
           NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALE
Sbjct: 186 NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSAISLYTSRKPYALE 245

Query: 265 EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 324
           EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
Sbjct: 246 EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 305

Query: 325 LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG 338
           LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHG
Sbjct: 306 LKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHG 365

[Close]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.8e-131
Identity = 245/300 (81.67%), Postives = 253/300 (84.33%), Query Frame = 0


Query: 42  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN 101
           T +  +G+  +++K      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN
Sbjct: 10  TPSTRNGAVDSQVKSNPRNNLIYG-QHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN 69

Query: 102 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 161
           EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
Sbjct: 70  EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 129

Query: 162 PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLAR 221
           PL                                  TDMPLGTAIHNIEITLGKGGQLAR
Sbjct: 130 PL----------------------------------TDMPLGTAIHNIEITLGKGGQLAR 189

Query: 222 AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK 281
           AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK
Sbjct: 190 AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK 249

Query: 282 RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 250 RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 4.5e-130
Identity = 240/280 (85.71%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 60  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY 119
           L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY
Sbjct: 30  LIYG-QHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY 89

Query: 120 ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC 179
           ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL                  
Sbjct: 90  ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL------------------ 149

Query: 180 TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL 239
                           TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
Sbjct: 150 ----------------TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL 209

Query: 240 PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE 299
           PSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE
Sbjct: 210 PSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE 269

Query: 300 GRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           GRAPIGRKKP TPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 270 GRAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.7e-130
Identity = 241/300 (80.33%), Postives = 251/300 (83.67%), Query Frame = 0


Query: 42  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN 101
           T +  +G+  +++K      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN
Sbjct: 10  TPSTRNGAVDSQVKSNPRNNLIYG-QHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRN 69

Query: 102 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 161
           EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
Sbjct: 70  EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 129

Query: 162 PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLAR 221
           PL                                  TDMPLGTAIHNIEITLGKGGQLAR
Sbjct: 130 PL----------------------------------TDMPLGTAIHNIEITLGKGGQLAR 189

Query: 222 AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK 281
           AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGK
Sbjct: 190 AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGK 249

Query: 282 RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           RPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K
Sbjct: 250 RPVVRGVVMNPVDHPHGGGEGRAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 274

[Close]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot
Match: B1NWJ1 (50S ribosomal protein L2, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-129
Identity = 243/302 (80.46%), Postives = 250/302 (82.78%), Query Frame = 0


Query: 38  KNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFR 97
           +N    +    +TR   K+   L +G +HRCGKGRNARGIITA HRGGGHKRLYRKIDFR
Sbjct: 14  RNGAVDSQAKSNTRNTRKN---LIYG-QHRCGKGRNARGIITARHRGGGHKRLYRKIDFR 73

Query: 98  RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGN 157
           RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGN
Sbjct: 74  RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGN 133

Query: 158 ALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQL 217
           ALPL                                  TDMPLGTAIHNIEITLGKGGQL
Sbjct: 134 ALPL----------------------------------TDMPLGTAIHNIEITLGKGGQL 193

Query: 218 ARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWL 277
           ARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWL
Sbjct: 194 ARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNTGVNQKSLGRAGSKCWL 253

Query: 278 GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR 337
           GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
Sbjct: 254 GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR 277

Query: 338 SK 340
           SK
Sbjct: 314 SK 277

[Close]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.3e-129
Identity = 240/280 (85.71%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 60  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY 119
           L +G +HRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY
Sbjct: 30  LIYG-QHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAY 89

Query: 120 ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC 179
           ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL                  
Sbjct: 90  ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL------------------ 149

Query: 180 TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL 239
                           TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
Sbjct: 150 ----------------TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL 209

Query: 240 PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE 299
           PSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE
Sbjct: 210 PSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGE 269

Query: 300 GRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           GRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 270 GRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL
Match: A0A5H2XTF6 (Ribosomal_L2_C domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_1306S000300 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.6e-167
Identity = 308/368 (83.70%), Postives = 311/368 (84.51%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------- 84
           + VFTDKSIRLLGKNQYTSNVESGSTRTEIKHW ELFFGVK                   
Sbjct: 6   YAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWFELFFGVKKNGTYYGTYNALQTYDHYA 65

Query: 85  -----------------------------------HRCGKGRNARGIITAGHRGGGHKRL 144
                                              HRCGKGRNARGIITAGHRGGGHKRL
Sbjct: 66  STGMAIHLYKTSTPSTRNGAVDSQSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRL 125

Query: 145 YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE 204
           YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE
Sbjct: 126 YRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTE 185

Query: 205 VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 264
           VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 186 VPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 245

Query: 265 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 324
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+
Sbjct: 246 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGK 305

Query: 325 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 339
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 306 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 365

[Close]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL
Match: A0A7J7LS59 (Ribosomal_L2_C domain-containing protein OS=Kingdonia uniflora OX=39325 GN=GIB67_020732 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.8e-167
Identity = 299/313 (95.53%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 27  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGG 86
           VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK  CGKGRNARGIIT  HRGGG
Sbjct: 8   VFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKRHCGKGRNARGIITVRHRGGG 67

Query: 87  HKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV 146
           HKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV
Sbjct: 68  HKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIV 127

Query: 147 SGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHN 206
           SGTEVPI MGNALPLSAISS TSRKPYALEEACTVWEGVLIDQKEESTST+MPLGTAIHN
Sbjct: 128 SGTEVPISMGNALPLSAISSYTSRKPYALEEACTVWEGVLIDQKEESTSTNMPLGTAIHN 187

Query: 207 IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQK 266
           IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQK
Sbjct: 188 IEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQK 247

Query: 267 SLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN 326
           SLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALG+RSRKRN
Sbjct: 248 SLGRAGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGKRSRKRN 307

Query: 327 KYSDNLILRRRSK 340
           KYSD+LILRRRSK
Sbjct: 308 KYSDSLILRRRSK 320

[Close]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL
Match: A0A4Y7JDX5 (Ribosomal_L2_C domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_005297 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.1e-155
Identity = 300/401 (74.81%), Postives = 303/401 (75.56%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR----------- 84
           + VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK      HR           
Sbjct: 6   YAVFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPM 65

Query: 85  ------------------------------------------------------------ 144
                                                                       
Sbjct: 66  GHTMHYKRMIITLQPGYSIPPLRKKKLKKKILNNTAIHLYKTSTPSTRNGAVDSQVKSNS 125

Query: 145 -----------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNR 204
                      CGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNR
Sbjct: 126 RNNLISGQQRHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNR 185

Query: 205 NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALE 264
           NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALE
Sbjct: 186 NAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSAISLYTSRKPYALE 245

Query: 265 EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 324
           EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
Sbjct: 246 EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 305

Query: 325 LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG 338
           LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHG
Sbjct: 306 LKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHG 365

[Close]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL
Match: A0A4Y7KDM0 (Ribosomal_L2_C domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_034129 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.5e-154
Identity = 292/361 (80.89%), Postives = 297/361 (82.27%), Query Frame = 0


Query: 25  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR----------- 84
           + +FTDKSIRLLG NQYT NVESGSTRTEIKHWVELFFGVK      HR           
Sbjct: 6   YAIFTDKSIRLLGNNQYTYNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPRKGRIMGPN 65

Query: 85  ----------------------------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRN 144
                                       CGKGRN RGIITA HRGGGHKRLY KIDFRRN
Sbjct: 66  GTYNALQTYDHYASTGIHNGAVDSQQRHCGKGRNTRGIITAWHRGGGHKRLYCKIDFRRN 125

Query: 145 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 204
           EKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRG IIGDTIVSGTEVPI MGNAL
Sbjct: 126 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGDIIGDTIVSGTEVPISMGNAL 185

Query: 205 PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLAR 264
           PLSAIS  TSRKPYALEEACTVWE VLIDQKEESTST MPLGTAIHNIEITLGKGGQLAR
Sbjct: 186 PLSAISLYTSRKPYALEEACTVWEWVLIDQKEESTSTGMPLGTAIHNIEITLGKGGQLAR 245

Query: 265 AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK 324
           AAGAVAKLIAKEGKSATLKL SGEVRLISK CSATVGQVGN GVNQKSLGR GSKCWLGK
Sbjct: 246 AAGAVAKLIAKEGKSATLKLLSGEVRLISKTCSATVGQVGNVGVNQKSLGRTGSKCWLGK 305

Query: 325 RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRS 340
           RPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALG RRSRKRNKYSD+LILRRR+
Sbjct: 306 RPVVRGVVMNPVDHPHGGGEGRAPIGRKQPTTPWGYPALGRRRSRKRNKYSDSLILRRRT 365

[Close]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL
Match: A0A6J5WEB6 (Ribosomal_L2_C domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS14630 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.9e-153
Identity = 276/298 (92.62%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 42  TSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK 101
           T +  +G+  ++      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK
Sbjct: 10  TPSTRNGAVDSQSNPRNNLIYG-QHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK 69

Query: 102 DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 161
           DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL
Sbjct: 70  DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 129

Query: 162 SAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAA 221
           SAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAA
Sbjct: 130 SAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAA 189

Query: 222 GAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRP 281
           GAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+AGSKCWLGKRP
Sbjct: 190 GAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGKAGSKCWLGKRP 249

Query: 282 VVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           VVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 250 VVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 306

[Close]

BLAST of CaUC02G033500 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 449.5 bits (1155), Expect = 2.4e-126
Identity = 230/275 (83.64%), Postives = 234/275 (85.09%), Query Frame = 0


Query: 65  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH 124
           +H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIH
Sbjct: 34  QHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIH 93

Query: 125 YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEG 184
           YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL                       
Sbjct: 94  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL----------------------- 153

Query: 185 VLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEV 244
                      TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEV
Sbjct: 154 -----------TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEV 213

Query: 245 RLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI 304
           RLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI
Sbjct: 214 RLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI 273

Query: 305 GRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           GRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 274 GRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]

BLAST of CaUC02G033500 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 449.5 bits (1155), Expect = 2.4e-126
Identity = 230/275 (83.64%), Postives = 234/275 (85.09%), Query Frame = 0


Query: 65  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH 124
           +H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIH
Sbjct: 34  QHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIH 93

Query: 125 YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEG 184
           YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL                       
Sbjct: 94  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL----------------------- 153

Query: 185 VLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEV 244
                      TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEV
Sbjct: 154 -----------TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEV 213

Query: 245 RLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI 304
           RLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI
Sbjct: 214 RLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPI 273

Query: 305 GRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 340
           GRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 274 GRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]

BLAST of CaUC02G033500 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 198 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 257
           M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 258 QVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PW 317
            V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187

Query: 318 GYPALG 320
           G P  G
Sbjct: 188 GKPCKG 193

[Close]

BLAST of CaUC02G033500 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 198 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 257
           M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 258 QVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PW 317
            V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187

Query: 318 GYPALG 320
           G P  G
Sbjct: 188 GKPCKG 193

[Close]

BLAST of CaUC02G033500 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-19
Identity = 81/266 (30.45%), Postives = 113/266 (42.48%), Query Frame = 0


Query: 82  HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHP 141
           HR G  K  +R +D+      + G +  I +DP R A +  + +        +K   +  
Sbjct: 23  HRKGPAK--FRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAA 82

Query: 142 RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTST 201
            G   G  +  G +  + +GN LPL +I                                
Sbjct: 83  EGMYTGQYLYCGKKANLMVGNVLPLGSI-------------------------------- 142

Query: 202 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSAT 261
             P G  I N+E+ +G  G LARA+G  A +IA   +S T  +KLPSG  +++   C A 
Sbjct: 143 --PEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAM 202

Query: 262 VGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GR 321
           +GQV   G  +K L +AG+          CW    PVVRGV MNPV+HPHGGG     G 
Sbjct: 203 IGQVAGGGRTEKPLLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPHGGGNHQHIGH 248

Query: 322 APIGR--KKPATPWGYPALGRRSRKR 326
           A   R  K      G  A  R  R+R
Sbjct: 263 ASTVRRDKSAGAKVGQIAARRTGRRR 248

The following BLAST results are available for this feature:

BLAST of CaUC02G033500 vs. NCBI nr


Match Name	E-value	Identity	Description
BBN69974.1	3.4e-167	83.70	hypothetical protein Prudu_1306S000300, partial [Prunus dulcis]	[more]
KAF6138377.1	5.8e-167	95.53	hypothetical protein GIB67_037667 [Kingdonia uniflora] >KAF6143161.1 hypothetica...	[more]
KAG6735406.1	9.8e-167	94.64	hypothetical protein POTOM_062054 [Populus tomentosa]	[more]
KAG6758775.1	1.7e-166	95.24	hypothetical protein POTOM_035235 [Populus tomentosa]	[more]
RZC57988.1	2.3e-155	74.81	hypothetical protein C5167_005297 [Papaver somniferum]	[more]

BLAST of CaUC02G033500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK5	1.8e-131	81.67	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
Q0ZIX7	4.5e-130	85.71	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=...	[more]
Q09MB2	7.7e-130	80.33	50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=...	[more]
B1NWJ1	1.0e-129	80.46	50S ribosomal protein L2, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl2-A P...	[more]
B1A976	1.3e-129	85.71	50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 ...	[more]

BLAST of CaUC02G033500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5H2XTF6	1.6e-167	83.70	Ribosomal_L2_C domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=...	[more]
A0A7J7LS59	2.8e-167	95.53	Ribosomal_L2_C domain-containing protein OS=Kingdonia uniflora OX=39325 GN=GIB67...	[more]
A0A4Y7JDX5	1.1e-155	74.81	Ribosomal_L2_C domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_...	[more]
A0A4Y7KDM0	3.5e-154	80.89	Ribosomal_L2_C domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_...	[more]
A0A6J5WEB6	3.9e-153	92.62	Ribosomal_L2_C domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDH...	[more]

BLAST of CaUC02G033500 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	2.4e-126	83.64	ribosomal protein L2	[more]
ATCG01310.1	2.4e-126	83.64	ribosomal protein L2	[more]
AT2G44065.1	1.1e-25	48.41	Ribosomal protein L2 family	[more]
AT2G44065.2	1.1e-25	48.41	Ribosomal protein L2 family	[more]
AT3G51190.1	3.3e-19	30.45	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 71..147 e-value: 1.6E-35 score: 134.0
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 196..337
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 63..169
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 153..316 e-value: 5.7E-73 score: 258.4
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 197..314 e-value: 1.0E-48 score: 164.7
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 196..338 e-value: 1.6E-63 score: 212.6
IPR005880	Ribosomal protein L2, bacterial/organellar-type	HAMAP	MF_01320_B	Ribosomal_L2_B	coord: 13..338 score: 41.195984
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 147..258 e-value: 1.1E-35 score: 123.3
None	No IPR available	GENE3D	2.40.50.140		coord: 57..146 e-value: 8.4E-35 score: 120.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..339
None	No IPR available	PANTHER	PTHR13691:SF51	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 63..169 coord: 196..337
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 259..338 e-value: 3.2E-34 score: 118.9
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 71..147 e-value: 1.7E-29 score: 101.5
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 281..292
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 27..66
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 64..154
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 197..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G033500.1	CaUC02G033500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003723	RNA binding