CaUC02G033490 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G033490
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Photosystem II protein D1
Location	Ciama_Chr02: 9660678 .. 9678658 (+)
RNA-Seq Expression	CaUC02G033490
Synteny	CaUC02G033490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGATTTTGTTGCAATTTTATGAATAAATAAAAAGGGGGGATTAAGTTTTTTTACTTATTTATATTTATGGATTGAATAAACCCGATATATTTTTTTCTACTTCTTCCTTAATTTCTTCTTTCGCCTACATCTTTTATGTCTATCTATGTTGATTATCTCTATAGTGCCAATCCAATCCAAGTCCGGAGTTTTTTGAATTCTTTATCTCTTATTTTAATATAATTTATTATTATTAGAATATTTTATCTATTATATTTTGTTAGCTTTATCTAGTTAAATATAACTATATTTATTTTATATATATTTTATATATATAAAATAAATATAAAATAAATCTATTTATTCCATTCAAATTGTTATTTCCATTTGTTTTTTATTCATTTATAATTCTTTTGTTTTCTCCATTGTAGGCGTTTTTCATTATTCACATTCATATTGACAACAGTGTATCAAACAAATATAATCCGATCGTGTATAAATGAAGCTAGTTATCTCTGTTTCATGACCTTTACTTTTCACGCACATGAGGGTCTCAGTGGATTTTCTGTGATACAAAAAATAAAATTACTTTTGTGTGATATAAGAAGTTTTTTTTTATTGGAATATTTTGATTACGTCGTCTAATTTCATTTCTTTTGTTATTTTGATTCCGATTGTATCTACACAGAAAAATTTTTGATATTTTTGGGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAAGTGCGGCTAGCATCTTTTACACATTTCTATGAAGTAACAGATTCGTCCATACTATCGGTAGAGTTTGTAAGACCGCGACTGATCCTGAAAGGAATGAATGGAAAAAGCAGCATGTCGTATCAATGGAAAATTCTAGTAATATTTTTACCTTACTAGATTAGGCCAAACCTTGTTTGAATTCTTGACTTGATGCGGAAAAAAAAAGTCAAGTCGGGTCGAATGAATAAATGGATAGGGCACTATGCTCCAATTATAGAGAAATAAAAAGTAACGGGCTTATGTTCTTAATTCGAATGATTCCCCGATCTAATTAGACGTTAAAACTATATTAGTGCTTGATGCGGGAAGGACTTTTCTTATGAGTGAGTTATCCATTTTTTTCTAAGTCCTAACTATTAGTTACTCTACGTTATGGGGTAGAGGGGAATGTGTAGAAGAAGCAGTATATTGATAAAGAGTTTTTTTCCAAAATCAAAAGCGCGATTGGGTTGAAAAAATAAAGGATTTCTAACCATCTTTTTTATCCTAAAATATAAACCAATTAGATGGCAAAAGAAAAGAGAGGATAGAGAGTCCGTTGATAAGTCTTACACCTATTTTCGAGGTATCTATTATTATTCTTTTTTTACTGTAATACCTTGTTTTGACTGTATCGCACTATGTATCATTTGAGAACCCAATAAATCCATTATAGTATCCCCAAGTTCAAATCAAATTTTAAATGGAGGAATTTCAAGGATATTTAGAACTTGAGAAATCTCGGCAACGTGACTTCCTATACCCACTTATCTTTCGGGAGTATATTTACGCATTTTCTCATGATCATTTTTTAAATGGATCCATTTTGTTGGAAAATTCTGGTTATGACAAAAAATCCAGTTTACTAATGGTAAAACATTTAATTACTCGAATGTATCACCAGAATCATTTTTTTTTCACTAATTATTATAACAAAAATCCATTTTTGGGGTACAACAAAAATTTGTATTCTCAAATGTTATCAGAAGGGTTTGCAGTCATTGTGGAAATTCCATTTTCCCTACGATTAGTATCTTCCTTAGAGGAAGAAGAAATCGTAAAATCTTATAATTTACGATCAAGTCATTCAATATTTCCTTTTTTAGAGGATAAATTCCCACATTTAAATTATGTGTCAGATGTATTAATACCCTATCCCCTCCATCTGGAAATTTTAGTTCAAACCCTTCGCTCCTGGGTGAAAGATGCCTCTTCTTTTCATTTATTACGGTTCTTTTTTCACGAGTATTGTAATTTGAATAGTCTTAGTACTTCAAAAAAATTGATTTCTTTTTTTTCAAAAAGAAATCGAAGATTAGTCTTGTTCCTATACAATTCTTATGTATGTGAATACGAATCCATTTTCCTTTTTCTACGTAACCAATCTTCTCATATACGATTAACTTCTTATAGGGGCCTTTTTGAGCGAATATATTTCTATGGAAAAATAGAACATCTTGTCAAAGTGTTTGCTAATTCTTTTTCGGCTATCTTACGGGTCTTCAAGGATCCTTTCATGCATTATGTTAGATATCAAGGAAAATCTATTCTGGTTTCAAAAGATACGCCACTTCTGATTAATAAATGGAAATATTACCTTGTCAATTTATGGCAATGTCATTTTTATGTGTGGTCACAACCAGAAAGGATCTATATAAACCCATTATCCAAGCGTTCTCTTGACTTTTTGGGCTATATTTCAAGTGTGCGATTAAATCCTTCAGTGGTATGGAGTCAAATGTTAGAAAATTCATTTCTAATAGATAATGCTACGAAGAAACTCGATACACTAGTTCCTATTATTACTCTGCTTGGATCATTGGCTAAAGCGAAATTTTGTAACGTGTTCGGGCATCCCATTAGTAAGCCGACCTGGATCGATTCGTCGGATTTTGATATTATTGATCGATTTGTGCGTATATCCAGAAATCTTTCTCATTATTACAGAGGATCCTCAAAAAAAAAGAATTTGTATCGAATCCAATATATACTTCGCCTTTCTTGTGTTAAAACTTTGGCTCGTAAACACAAAAGTACTGTACGTGCTCTTTTTAAAAGGTTAAATTCGGAATTATTGGAAGAATTCTTTTCGGAGCAAGAACAGGTTCTTTCTTTGATCTTCCCAAGAGCTTCTTTTACTTTACGGAGGGTATATAGGGGGAAAATTTGGTATTTGGATATTATTTGCATCAATGATTTGGCCAATCATGAATGATTGGTTATGAGACCATGTAAATGAGAATTTTACTTAATAAATGCTGAAGTGAAGAGATAACAAAAAAATTCATTAATTTCTATTATGAAATGTTCATTTGGTAAGAGTTGATCAACAGAATATTCCACTTTCTTAGTTAGAATCCTGCCTAGGGAAGTAACTGCGTTTTAGATGTATACATAGGTAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGAGGGATTTTTTTTTACTTATTTGTTTTTAAGTAAATTATCTACTCCATCCGACTAGTTCCGGGTTCGAGTCCCGGGCAACCCATATTAATGATGATAGTGAACTAATTTATCATATCGAAATAATCTATCAAGTCTAATTCGATTTTTTAATGAATGAAAAGAAAGAATTAAATAAAAAAAAATTCTGATTAATCTAGATAACTAATAAATAAAAGCATAGATATATATTTATATTTATGGATGTTGATATTGGTTGACATGGGTATATAAGTCATGTTATACTGTTGAATAACAAGCCCTTCATTTTCTATTTATAGAGAATTCATGTGCTTGGGAGTCCCTGATGATTAATGATTAAATAAACCAAGATTTTACCATGACTGCAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCTATTATCCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAACGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAAGTTCCATCTATTAATGGATAAGACTTCTGTCTTAGTGTATACGAGTTCTTGAAAGTAAAGGAGCAATAACCAATTTCTTGTTTTCTCAAGAGGGTTGGTATTGCTCCTTTATTATTAATAAATTTTACATAACTTTTTTTCGAATTTCGACTTATATATAGGGTAGGGGGCGGATGTAGCCAAGTGGATCAAGGCAGTGGATTGTGAATCCACCATGCGCGGGTTCAATTCCCGTCGTTCGCCCATAATATATAGTTATAGAATATATAACTGATAAGAGAAATACAGTGAATTTACCTCCTATTTTTTTTGTTTGTAAAGACGAAGAAACAAATTCGATTTTCTCTCTTATTTACTACGGCGACGAAGAATCAAATTATCACTATATTTATTCCTTTTTCGACTTCTTCTTCCAAGTGCAGGATAACCCCAAGGGGTTGCGGGTTTTTTTCTACCAATTGGGGCCCTCCCTTCACCACCCCCATGGGGATGGTCTACAGGGTTCATAACTACTCCTCTTACTACAGGACGCTTACCTAGCCAACATTTAGATCCGGCTCTACCCAAACTTTTCTGGTTTACCCCAGCATTCCCCACTTGTCCGACTGTTGCTGAGCAATTTTTGGATATCAAACGGACCTCCCCAGAAGGTAATTTTAATGTGGCCGATTTCCCCTCTTTTGCAATCAGTTTCGCTACAGCACCTGCTGCTCTAGCTAATTGTCCCCCCTTCCCAAGTGTGATTTCTATGTTATGTATGGCCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTTTGATCAATCAAAACCCCTTCCCAAACTGTACAAGCTTCTTCCAAAGCATACGGCTTTCTGGATGTAGATGATGATATCTATACATATGGATCTTATATATATCGTACAATGAAGTACCACATGAGTGGATATATAGGAATCCAAATCTGCCGAATCACTCATGTTATGATCTTCTACATCCTAGGTCTTCCCGTTCCTTCATCTGGCTTATGTTCTTCATGTAGCATTCAGACCGAATGACTCTATGAAATTACGTCGATACTTCCACATATTACGGGTAACGTAGGAGACATCTCTATTTTTCCCCTCGGGAATCCTTAGAATTACCACTGCTTAGCTTTCAATTTGCCTCTGACCATCAAATGAAATGTGAATAACCCGTCCTGCTCTCTTTGAAACAAGGGACGCTTCTGGTTCTGTCGGTGCTTGAAACAATTTAGTCTTCTCCATATTACTATATCTCTAGAGTCAATAATTTTATATGAGGAACTACTGAACTCAATCACTTGCTGCCGTTACTCTTCAGTTTTCTGTTGAGGTCTATCCTGTGGAGGTACTCAAATTGGATCAGTGATCGATTTCTAGGTTTCGTCGTAAACCTAATTGGTTACTTCCAATTACGTAAATCAATAGTTCAAACCGCACTCAAAGGTAGGGCATTTCCCATTTTTATAGGAACTTCTGTACCAGAAACAATGGTATCTCCAATTATAGCCCCTCTGGGATGTAAAATATATCTTTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTACGATTCTACCATATATGTCTTTTTCATTCCGTCGAAAATCGATTTTACGGTATAGACGCTTATGACCTCCCCCTCTATGCCCTGCGGTAATGATTCCTCTGGCATTACGACCTTTACCACAACGATGCTGTCCATAGATCAAATTATTTCGTGGATTGGATTTTACTTGACTGTCTACGGCTCCATTGCGTGTGCTCGGGGTAGAAGTTTTGTATAAATGTATCGCCATGCTATTAAGTATTTTGATTTAAGTTCTTTTCTTTCTAAGAGGTGGAATAGAATAACCCGGTTGAAGCGTAATGATCATACGTCTGTAATGCATTGTATGTCCCATAATAGGTCCCATTCTTCTACCCTTTCCCGGGAGTCGATGACTATTCATAGCTATTACCTTGACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCCTAGTTGATCCTGATTCGACATTAGAAGTATATTGATTTTTCCCCAATAACCGAATACTTTTGTCTGTAAATACTGCATATTTGATTCCATCCATAAATTTTCTTCCCTATGAGTTCGAGTCTCAATAAGAATGCTAGTTCTTACTGTTCATATGTTATGATATGAATATACCACACCAATTCGTTATGTATGGATGATGAGATTCCATCGATACAGAGCCAATTCCAATAGACTTATTGGAGGGTCCCATTGGCGTGCATCCAGTAGGAATTGAACCTACGAATTCGCCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAGCGGGGATCCTCGTACATGGTGAATAACCAAATTCCAATTGAAATGAAATCTTTAGGATAAATCAATGCAATTTAGGAGGACTCAATGAAAGGACATCAATTCAAATCCTGGATTTTCGAATTGAGAGAGATCAAGAATTCTCACTATTTCTTAGATTCATGGACCCAATTCAATTCAGTGGGATCTTTCATTCACATTTTTTTCCATCAAGAACGTTTTATAAAACTCTTAGACTCCCGAATTTGGAGTATCCTACTTTCACGCAATTCACAGGGTTCAACAAGCAATCGATATTTCACGATCAAGGGTGTAGTACTATTTGTAGTAGCGGTCCTTATATATCGTATTAACAATCGAAAGATGGTCGAAAGAAAAAATCTCTATTTGACAGGGTTTCTTCCTATACCTATGAATTTCATTGGACCCAGAAATGATAGATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGGTTGATTGTTTCGCTCCTGTATCTTCCAAAAGGAAAAAAGATCTCTGAGAGCTGTTTCCTGGATCCGAAAGAGAGTACTTGGGTTCTCCCAATAACTAAAAAGTGTATCATGCCTGAATCTAACTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTGTAAGATATCTAATGAAACCGTCGCTGGAATGGAGATCTCATTCAAAGAGAAAGATATCAAATATCTGGAGTTTCTTTTTGTATATTATATGGATGATCAGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTGTTATCTCATGTTTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCGCCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACGGAATGTCTTGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGACGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAAATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGGTATTCAACTCCAGGGATGAATCGAAAAAGAAATATTTATTGGTTCTACCTCCTATTTTTTATGAAGAGAATGAATCTTTTTATCGAAGGATCAGAAAAAAATGGGTCCGGACCTCCCCCGGGAATGATTTGGAAGATCCAAAACAAAAAATAGTGGTATTTGCTAGCAACAACATAATGGAGGCAGTCAATCAATATAGATTGATCCGAAATCTGATTCAAATCCAATATAACACCTATGGGTACATAAGAAATGTATTGAATCGATTCTTTTTAATGAATAGATCCGATCGTAACTTGGAATATGGAATTCAAAGGGATCAAATAGGAAATGATACTCTGAATCATAGAACTATAATGAAATATACGATCAACCAACATTTATCAAATTTGAAAAAGGGTCAGAAGAAATGGTTCGATCCTCTTATTTTGATTTCTCGAACCGAGAGATCCATGAATCGGGATCCTAATGCATATAGATACAAATGGTCCAATGGGAGCAAGAATTTCCAGGAACATTTCATTTCTGAGCAGAAGAGCCATTTTCATTTTCAAGTAGTGTTCGATCGATTACGTATTAATCAATATTCGATTGATTGGTCTGAGGTTATCGATAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTTACTTGTTTTTTTGTCCAAGTTTCTTCTCTTTTTGTCTAACTCACTTCCTTTTTTCTTTGTGAGTTTCGGGAATATCCCCATTCATAGGTCCGAGATCCACATCTATGAATTGAAAGGTCCGAATGATCAACTCTGCAATCAGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATTGAAACCCTTCTTATTGGATGATCATGATACTTCCCAAAAATCGAAATTCTTGATCAATGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGATTGACTCATTCCATACTAGAAATAATCGCAGGAAATCCTTTGATAACACGGATTCCTATTTCTCAATGATATCCCACGATCAAGACAATTGGCTAAATCCCGTGAAACCATTTCATAGAAGTTCATTGATATCTTCTTTTTATAAAGCAACTCGACTTCGATTCTTGAATAATCCACATCACTTCTGCTTCTATTGTAACAAAAGATTCCCTTTTTATGTGGATTATGTGGAAAAGGCCCGTATCAATAATTATGATTTTACGTATGGACAATTCCTCAATATCTTGTTCATTCGCAACAAAATATTTTCTTTGTGCGGCGGTAAAAAAAAACATGCTTTTTTGGAGAGAGATACTATTTCACCAATCGAGTCACAGGTATCTAACATATTCATACCTAACGATTTTCCACAAAGTGGTGACGAAAGGTATAACTTGTACAAATCTTTCCATTTTCCAATTCGATCCGATCCATTCGTTCGTCGAGCTATTTACTCGATCGCAGACATTTCTGGAACACCTCTAACAGAGGGACAAATAGTCAATTTTGAAAGAACTTATTGTCAACCTCTTTCAGATATGAATCTATCTGATTCAGAGGGGAAGAACTTGCATCAGTATCTCAATTTCAATTCAAACATGGGTTTGATTCACACTCCATGTTCTGAGAAATATTTACCATCCGAAAAGAGGAAAAAACGGAGTCTTTGTCTAAAGAAATGCCTTGAGAAAGGGCAGATGTATAGAACCTTTCAACGAGATAGTGCTTTTTCAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTTTCTATTTTTAGATACTTTTTCAGACCTATTGCCGATACTAAGTAGCAGCCAAAAATTTGTATCCATTTTTCATGATATTATGCATGGATCAGATATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAATGGAATCTGATAAGTGAGATTTCGAGTAAGTGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATGTTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAATCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATATATTCATTGATAAGAAAAAGAAAAAATGTGAACGGTGATTGGATTGATGATAAAATCGAATCCTGGGTCTCGAACAGTGATTCGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGTTATCAAATGATTGAACAACCGGGAGTAATTTACTTACGATACTTAGTTGACATTCATAAAAAGTATCTAATGAATTATGAGTTCAATACATCCTGTTTAGCAGAAAGACGGACATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTCTAACTATGATGAATGCGCTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAGTAATTGCTCCATAGATCCTATATCTATCTATATGAAGAAGAAATCATGTAACGAAGGGGGTTCTTATTTGTACAAATGGTACTTCGAACTTGGAACGAGCATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCCAGGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGGGAAGGAGAAGGAGTCCTCGACGCGCAACAGTTAGAGGAGGATTTATTCAATCACATATTTTGTGCTCCTAGAATATGGCACCCTTGGGGCTTTCTATTTGATTGTATCGTAAGGCCCAATGAATTGGGATTTCCTATTGGGCTAGGTCATTTTGGGGCAAGCGGATCATTTATGATGAATTTGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGGCTTTTTTTCGAATAAGCCAATTCATTTGGGATTTAAAAGAAGTGATTTTATTGGTATGATCCACGGATTAATCTTATATGCATTATAAAGTATCAAAAATTCTGGAAAGAACCAAAGTTCGAGATTCGATATGGAACGACTTAGTATTTCTTCATTCATTCTCATCCAATCAAAAAAGATTTTTTTTTTATTGTTGGATGGGTTGCTTTCTTGATCTTGATTAATTGTGAGATAAAAAAAATCTTTCTTATCGATTCTTTCAATTAGTTGAAAATTATTAACCCCCGTTTTAGTAGTTTTATTACTGTTCGTGTCAGCCTCAATATTGATCCAGGCTCGAATATCGGCCTTATTTTTAAGACAAAAATGCAGCATTCTCCAATCAAAATATTTTCTATCCGGATTTTTTCCCAGATCTATAATATCATCTTCGACTAGATAATTATTGATCGGGATCCCAGTCAGTATATCAAAAAATTTCCATTTATCTGTGTTGTACTTATAAGAACTTTCTTGATTATTTTTTACTTGTACTGGTAATTCAGAAATATATGAATCTTTATTATCTTCATAATTAATAGATTTATATGATAAAAGATCATATATATATATATATATATATATATATATATATATATATATTTTATATTATCTTTTTTATTCGATAATGAGTAGTGTATTTCATAAGAATTGGCCTGTAGCCCCACCCCGTCTCCACTGGATCTGTTCCCGGGGGTACCCTAAAAAAAGGAACCTTTCCTCTCCCCAGCCATTTGCCATTTCGGGTTAAGAAGATGTGAAAGCGCCTCTCTCTCTATAAGAACGGTGCGTTCCAAGGTGTGAAGTGAGAGAGAAAAGTGGGAGAGAAGGGGTTTTGAATAAGACGACCTTTTCATTTTTCATTTTTTTTTTCCATATTGATATTGAATATTGAAAAGTAATAAGAATTAGAGGTGTTAAGCTTTTTATCATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGAGTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAGAAAGGCATGAGAGAAAAGCATATTGGCTAGTGATTGTGAGGCCCCAATTCTTGACTGGAGGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATGGTTTTTTCGTGTTGTCAAAGAGTTGAACAATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGGGGCCTTCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACANTTTTATTGTGTCGCTTAAGTTATATAGGAACTCTTGAACCCAAGAGTTAAGAATAACAAGTTCTTCATTACCAAGAATAGAATAACCACTTAGAATAACGAAACAGATTATATTTGTCGAGAAGTGCAAAATCGTATGGATATGATCCTCATTGTGCATCTTGATCAATTGGATCGTTTCTTTGTAGATTCCGATACGAAGCTTTTGTAGATGTATTTCTGGGTATTAATTTTCTACTCAATGGTCACACCATTGATATAACCAATATAACCAACCAATTGTAAGTTAAGTCTCATTTATTCATTAATTATCTCATATTGAGAGAAGATTAATTATATGTCCTCAACACTACAGGTGTCTTAGATCACTCTTCCTTAGACTTAACTTCATTATCATGCTTTTGATGTTTTGCATCGAATATTGGACAAACATTTTGTAAATGTAAGATGCTTGAGAAAAACTTAATATTATGGGCTTTATCTCATCAACAAAATCTATAAATCCAGACTGAAATGAAGTACGAAAACTTTATCTTGAGTTCCTGACTTGACTTAGCAATGCTTGTCAACATCCCTCAACACAATTTTGAGGATGATAAATGTTTAAATTTGTCAACTAATATGACAATTTTGACTTCAACTAAGTCATAGTAAAGGTTGAGTTATCCAACATCTCTCCCAATATGATGAAGGCTCATCATGTTTGACTAGGATTCATTTGACATTCAAATGTAGTTAAATGGTTAATAACATTTATTAACTCTTTCATGGATTTACCTGAAAAAAAAAATATCAACACTATTTAACCTTAGTAAAGGTTTATAGTCTTTTATTCGACATTCCATATAAAATTAATATTTGTCATACAAATATTTTATTTTATTCAGGACTGTATAAAAGACCATTCTTTTCCTCCATGAGAACAGCCTACTCTTAGGCATATCCGTGAACATATATATTCTTTTGGGTTTGGTTCATCATGTGCATCTGAACGTACTCATATGCTGAATGTTGTAAACTAGTTTTTACACTTCCATAATCTAAAACTGTCTCCAAGATAGTTTTGGAGGAAACAATGCTCACAATACAATCTCTATTGCACGTCCTAACCAGAGTATGGCAATGATGTGTAACTAATTAATAATGTAACCTTGTCTAATAAAGTACACATCATTAATGAGACCAAGTCTAACAAGGTCATCTTTCTTCACAATTTCACCCAAATTGAAACTGATGCTTAAGGTTGAGATATAATACCATTTTTTATCAATTAGGTTTAGTACGGAGATTTTTGTACTTTTATGATTGTTCTGAGCCTGTCCGAACCTATAACGAAGAATATTTCTTAAATCGCTGATAAGTAACATTAATTAACAACCTTCTTCACAAACAAGACCTTTCGATCTCAAACTCAAACACCCCAAATCAAGATGATCTCAACCCATTTTTAAGAATGCTAGTGAGGGATAATTCTTTTTCCTTTGGTTTTTGGGGAAAGCTCTTCGTTAACTCCAATGCTACATGATGATCTCAACCCGTATTTAAATTGTTTTGTGAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAGCTGCAGCTTATATAGGCGAATCCATGGAGGGTCATCATTGA

mRNA sequence

ATGGGATTCGTCCATACTATCGGTAGAGTTTGTAAGACCGCGACTGATCCTGAAAGGAATGAATGGAAAAAGCAGCATGTCGTATCAATGGAAAATTCTAATAATGCTACGAAGAAACTCGATACACTAGTTCCTATTATTACTCTGCTTGGATCATTGGCTAAAGCGAAATTTTGTAACGTGTTCGGGCATCCCATTAGTAAGCCGACCTGGATCGATTCGTCGGATTTTGATATTATTGATCGATTTGTGCAGAGACGCGAAAGCGAAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCTATTATCCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGTAACGGATTCTAGCCAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGACGATCGGAAAATAAAGAAATAAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAATATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCACTTATATAGGCGAATCCATGGAGGGTCATCATTGA

Coding sequence (CDS)

ATGGGATTCGTCCATACTATCGGTAGAGTTTGTAAGACCGCGACTGATCCTGAAAGGAATGAATGGAAAAAGCAGCATGTCGTATCAATGGAAAATTCTAATAATGCTACGAAGAAACTCGATACACTAGTTCCTATTATTACTCTGCTTGGATCATTGGCTAAAGCGAAATTTTGTAACGTGTTCGGGCATCCCATTAGTAAGCCGACCTGGATCGATTCGTCGGATTTTGATATTATTGATCGATTTGTGCAGAGACGCGAAAGCGAAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCTATTATCCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGTAACGGATTCTAGCCAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGACGATCGGAAAATAAAGAAATAAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAATATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTACTACTTAGATGCTTTCAGCACTTATATAGGCGAATCCATGGAGGGTCATCATTGA

Protein sequence

MGFVHTIGRVCKTATDPERNEWKKQHVVSMENSNNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFVQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHVTDSSQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRSENKEINLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSIRSKKKDWNINLIDLIIFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDHGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSTYIGESMEGHH

Homology

[Close]

BLAST of CaUC02G033490 vs. NCBI nr
Match: KAB2069699.1 (hypothetical protein ES319_A08G109400v1, partial [Gossypium barbadense])

HSP 1 Score: 545.0 bits (1403), Expect = 8.9e-151
Identity = 273/315 (86.67%), Postives = 284/315 (90.16%), Query Frame = 0


Query: 30  MENS---NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFV-- 89
           +ENS   +NA K L T +PIITL+ SL+KAKFCN  GHPI+KPTW D  D DIIDRFV  
Sbjct: 71  LENSFLIDNAVKTLYTRIPIITLIRSLSKAKFCNTLGHPINKPTWADFPDSDIIDRFVRI 130

Query: 90  --------QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP 149
                   +RRESE+LWGRFCNWITSTEN +YIGWFGVLMIPTLLT   VFIIAFI +PP
Sbjct: 131 SRNLSHYHERRESETLWGRFCNWITSTENHIYIGWFGVLMIPTLLTVAFVFIIAFIVSPP 190

Query: 150 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 209
           VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL
Sbjct: 191 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 250

Query: 210 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 269
           HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS
Sbjct: 251 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 310

Query: 270 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 329
            TFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT+NESANEGY
Sbjct: 311 STFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTKNESANEGY 370

Query: 330 RFGQEEETYNIVAAH 332
           RF QEEETYNIVAAH
Sbjct: 371 RFCQEEETYNIVAAH 385

[Close]

BLAST of CaUC02G033490 vs. NCBI nr
Match: TYH05957.1 (hypothetical protein ES288_A08G120000v1 [Gossypium darwinii])

HSP 1 Score: 543.9 bits (1400), Expect = 2.0e-150
Identity = 273/315 (86.67%), Postives = 283/315 (89.84%), Query Frame = 0


Query: 30  MENS---NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFV-- 89
           +ENS   +NA K L T +PII+L+ SL+KAKFCN  GHPI+KPTW D  D DIIDRFV  
Sbjct: 78  LENSFLIDNAVKTLCTRIPIISLIRSLSKAKFCNTLGHPINKPTWADFPDSDIIDRFVRI 137

Query: 90  --------QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP 149
                   +RRESE+LWGRFCNWITSTEN +YIGWFGVLMIPTLLT   VFIIAFI  PP
Sbjct: 138 SRNLSHYHERRESETLWGRFCNWITSTENHIYIGWFGVLMIPTLLTVAFVFIIAFIVYPP 197

Query: 150 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 209
           VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL
Sbjct: 198 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 257

Query: 210 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 269
           HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS
Sbjct: 258 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 317

Query: 270 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 329
            TFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY
Sbjct: 318 STFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 377

Query: 330 RFGQEEETYNIVAAH 332
           RF QEEETYNIVAAH
Sbjct: 378 RFCQEEETYNIVAAH 392

[Close]

BLAST of CaUC02G033490 vs. NCBI nr
Match: KAD5802925.1 (hypothetical protein E3N88_14285 [Mikania micrantha])

HSP 1 Score: 523.5 bits (1347), Expect = 2.8e-144
Identity = 265/298 (88.93%), Postives = 272/298 (91.28%), Query Frame = 0


Query: 34  NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFVQRRESESLW 93
           +NA KK D+ VPI+ L+GSLAK+KFCN  GHPI                  +RRESESLW
Sbjct: 248 DNAIKKFDSSVPIMPLVGSLAKSKFCNALGHPI------------------ERRESESLW 307

Query: 94  GRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG 153
           GRFCN ITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG
Sbjct: 308 GRFCNRITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG 367

Query: 154 NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELS 213
           NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA YMGREWELS
Sbjct: 368 NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAYYMGREWELS 427

Query: 214 FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM 273
           FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA+HNILM
Sbjct: 428 FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKHNILM 487

Query: 274 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH 332
           HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH
Sbjct: 488 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH 527

[Close]

BLAST of CaUC02G033490 vs. NCBI nr
Match: PHT94636.1 (hypothetical protein T459_02518 [Capsicum annuum])

HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-142
Identity = 334/717 (46.58%), Postives = 343/717 (47.84%), Query Frame = 0


Query: 121 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 180
           + ATSVFIIAF +APP+DIDGIREPVSGSL+YGNNIISGAIIPTSAAIGLHFYPIWEAAS
Sbjct: 1   MMATSVFIIAFNSAPPIDIDGIREPVSGSLIYGNNIISGAIIPTSAAIGLHFYPIWEAAS 60

Query: 181 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 240
           VDEWLYNGGPYELIVLHFLLGVA YMG EWELSF LG+RPWIAVAYSAPV AATAVFLIY
Sbjct: 61  VDEWLYNGGPYELIVLHFLLGVAYYMGHEWELSFHLGIRPWIAVAYSAPVVAATAVFLIY 120

Query: 241 PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 300
           PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS
Sbjct: 121 PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 180

Query: 301 SLIRETTENESANEGYRFGQEEETYNIVAAH----------------------------- 360
           SLIRETTENESANEGYRFGQEEETYNIVAAH                             
Sbjct: 181 SLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV 240

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 241 GIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGLLPIPMNSIGPRND 300

Query: 421 ------------------------------------------------------------ 480
                                                                       
Sbjct: 301 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPKESTWVLPITKKYSIPKSNWGSRWW 360

Query: 481 ------------------------------------------------------------ 482
                                                                       
Sbjct: 361 RNWIRKKRDSSCKISNETVAGIEILFKEKDLKYLEFLFVYYMDYPIRNDHDWKLLDRLSL 420

[Close]

BLAST of CaUC02G033490 vs. NCBI nr
Match: AIW05415.1 (photosystem II protein D1 [Neobracea bahamensis])

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-137
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           +QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot
Match: A4QJ96 (Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.3e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot
Match: A4QJI0 (Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.3e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot
Match: P02956 (Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.3e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot
Match: A4QJZ9 (Photosystem II protein D1 OS=Arabis hirsuta OX=78191 GN=psbA PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.3e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot
Match: P83755 (Photosystem II protein D1 OS=Arabidopsis thaliana OX=3702 GN=psbA PE=1 SV=2)

HSP 1 Score: 500.4 bits (1287), Expect = 3.3e-140
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL
Match: A0A5J5UQF9 (Photosystem II protein D1 (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A08G109400v1 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 4.3e-151
Identity = 273/315 (86.67%), Postives = 284/315 (90.16%), Query Frame = 0


Query: 30  MENS---NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFV-- 89
           +ENS   +NA K L T +PIITL+ SL+KAKFCN  GHPI+KPTW D  D DIIDRFV  
Sbjct: 71  LENSFLIDNAVKTLYTRIPIITLIRSLSKAKFCNTLGHPINKPTWADFPDSDIIDRFVRI 130

Query: 90  --------QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP 149
                   +RRESE+LWGRFCNWITSTEN +YIGWFGVLMIPTLLT   VFIIAFI +PP
Sbjct: 131 SRNLSHYHERRESETLWGRFCNWITSTENHIYIGWFGVLMIPTLLTVAFVFIIAFIVSPP 190

Query: 150 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 209
           VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL
Sbjct: 191 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 250

Query: 210 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 269
           HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS
Sbjct: 251 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 310

Query: 270 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 329
            TFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT+NESANEGY
Sbjct: 311 STFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTKNESANEGY 370

Query: 330 RFGQEEETYNIVAAH 332
           RF QEEETYNIVAAH
Sbjct: 371 RFCQEEETYNIVAAH 385

[Close]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL
Match: A0A5D2FID8 (Photosystem II protein D1 OS=Gossypium darwinii OX=34276 GN=ES288_A08G120000v1 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 9.6e-151
Identity = 273/315 (86.67%), Postives = 283/315 (89.84%), Query Frame = 0


Query: 30  MENS---NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFV-- 89
           +ENS   +NA K L T +PII+L+ SL+KAKFCN  GHPI+KPTW D  D DIIDRFV  
Sbjct: 78  LENSFLIDNAVKTLCTRIPIISLIRSLSKAKFCNTLGHPINKPTWADFPDSDIIDRFVRI 137

Query: 90  --------QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP 149
                   +RRESE+LWGRFCNWITSTEN +YIGWFGVLMIPTLLT   VFIIAFI  PP
Sbjct: 138 SRNLSHYHERRESETLWGRFCNWITSTENHIYIGWFGVLMIPTLLTVAFVFIIAFIVYPP 197

Query: 150 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 209
           VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL
Sbjct: 198 VDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL 257

Query: 210 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 269
           HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS
Sbjct: 258 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 317

Query: 270 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 329
            TFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY
Sbjct: 318 STFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 377

Query: 330 RFGQEEETYNIVAAH 332
           RF QEEETYNIVAAH
Sbjct: 378 RFCQEEETYNIVAAH 392

[Close]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL
Match: A0A5N6P436 (Photosystem II protein D1 OS=Mikania micrantha OX=192012 GN=E3N88_14285 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144
Identity = 265/298 (88.93%), Postives = 272/298 (91.28%), Query Frame = 0


Query: 34  NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFVQRRESESLW 93
           +NA KK D+ VPI+ L+GSLAK+KFCN  GHPI                  +RRESESLW
Sbjct: 248 DNAIKKFDSSVPIMPLVGSLAKSKFCNALGHPI------------------ERRESESLW 307

Query: 94  GRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG 153
           GRFCN ITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG
Sbjct: 308 GRFCNRITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYG 367

Query: 154 NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELS 213
           NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA YMGREWELS
Sbjct: 368 NNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAYYMGREWELS 427

Query: 214 FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM 273
           FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA+HNILM
Sbjct: 428 FRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAKHNILM 487

Query: 274 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH 332
           HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH
Sbjct: 488 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAH 527

[Close]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL
Match: A0A2G3AK66 (32 kDa thylakoid membrane protein OS=Capsicum annuum OX=4072 GN=T459_02518 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.3e-142
Identity = 334/717 (46.58%), Postives = 343/717 (47.84%), Query Frame = 0


Query: 121 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 180
           + ATSVFIIAF +APP+DIDGIREPVSGSL+YGNNIISGAIIPTSAAIGLHFYPIWEAAS
Sbjct: 1   MMATSVFIIAFNSAPPIDIDGIREPVSGSLIYGNNIISGAIIPTSAAIGLHFYPIWEAAS 60

Query: 181 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 240
           VDEWLYNGGPYELIVLHFLLGVA YMG EWELSF LG+RPWIAVAYSAPV AATAVFLIY
Sbjct: 61  VDEWLYNGGPYELIVLHFLLGVAYYMGHEWELSFHLGIRPWIAVAYSAPVVAATAVFLIY 120

Query: 241 PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 300
           PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS
Sbjct: 121 PIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 180

Query: 301 SLIRETTENESANEGYRFGQEEETYNIVAAH----------------------------- 360
           SLIRETTENESANEGYRFGQEEETYNIVAAH                             
Sbjct: 181 SLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV 240

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 241 GIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGLLPIPMNSIGPRND 300

Query: 421 ------------------------------------------------------------ 480
                                                                       
Sbjct: 301 TLEESVGSSNINRLIVSLLYLPKGKKISESCFLNPKESTWVLPITKKYSIPKSNWGSRWW 360

Query: 481 ------------------------------------------------------------ 482
                                                                       
Sbjct: 361 RNWIRKKRDSSCKISNETVAGIEILFKEKDLKYLEFLFVYYMDYPIRNDHDWKLLDRLSL 420

[Close]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL
Match: A0A0A0RU16 (Photosystem II protein D1 OS=Neobracea bahamensis OX=429518 GN=psbA PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.5e-138
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           +QRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A )

HSP 1 Score: 500.4 bits (1287), Expect = 2.3e-141
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 84  VQRRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 143
           ++RRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR
Sbjct: 5   LERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIR 64

Query: 144 EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 203
           EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA
Sbjct: 65  EPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVA 124

Query: 204 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 263
           CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI
Sbjct: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184

Query: 264 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 323
           VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE
Sbjct: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244

Query: 324 TYNIVAAH 332
           TYNIVAAH
Sbjct: 245 TYNIVAAH 252

[Close]

BLAST of CaUC02G033490 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-68
Identity = 137/160 (85.62%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 332 VTDSSQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTE 391
           VTDSSQL GSSDQ  D FDSISNEDSE  YHTLINQREIQQLKERSIL DPSF+QTE  E
Sbjct: 387 VTDSSQLNGSSDQFIDPFDSISNEDSEYHYHTLINQREIQQLKERSILLDPSFIQTEGRE 446

Query: 392 IESDRFPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHM 451
           IESDRFPK  SGYSSM RLFTEREK+MNNH LPEE EEFLGNPTR+IRSFFSDRWSELH+
Sbjct: 447 IESDRFPKYLSGYSSMPRLFTEREKRMNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHL 506

Query: 452 GSNPIERSTRDQKLLKKEQDVSFVPSRRSENKEI-NLFLV 489
           GSNP ERSTRDQKLLKKEQDVSFVPSRRSENKEI N+F +
Sbjct: 507 GSNPTERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKI 546

HSP 2 Score: 86.7 bits (213), Expect = 8.1e-17
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 484  NLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSIRSKKKDWNINLIDLI 538
            NLFLVALEQLGD LEEI G  SGGNMLWGG PAYGVKSIRSKKKD  IN ID+I
Sbjct: 1417 NLFLVALEQLGDCLEEIRG--SGGNMLWGGDPAYGVKSIRSKKKDLKINFIDII 1468

[Close]

BLAST of CaUC02G033490 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-68
Identity = 137/160 (85.62%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 332 VTDSSQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTE 391
           VTDSSQL GSSDQ  D FDSISNEDSE  YHTLINQREIQQLKERSIL DPSF+QTE  E
Sbjct: 387 VTDSSQLNGSSDQFIDPFDSISNEDSEYHYHTLINQREIQQLKERSILLDPSFIQTEGRE 446

Query: 392 IESDRFPKCFSGYSSMSRLFTEREKQMNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHM 451
           IESDRFPK  SGYSSM RLFTEREK+MNNH LPEE EEFLGNPTR+IRSFFSDRWSELH+
Sbjct: 447 IESDRFPKYLSGYSSMPRLFTEREKRMNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHL 506

Query: 452 GSNPIERSTRDQKLLKKEQDVSFVPSRRSENKEI-NLFLV 489
           GSNP ERSTRDQKLLKKEQDVSFVPSRRSENKEI N+F +
Sbjct: 507 GSNPTERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKI 546

HSP 2 Score: 86.7 bits (213), Expect = 8.1e-17
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 484  NLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSIRSKKKDWNINLIDLI 538
            NLFLVALEQLGD LEEI G  SGGNMLWGG PAYGVKSIRSKKKD  IN ID+I
Sbjct: 1417 NLFLVALEQLGDCLEEIRG--SGGNMLWGGDPAYGVKSIRSKKKDLKINFIDII 1468

[Close]

BLAST of CaUC02G033490 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 116.7 bits (291), Expect = 7.3e-26
Identity = 70/248 (28.23%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 87  RESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 146
           ++ + L+    +W+   +  +++GW G+L+ P    A   +             G+    
Sbjct: 10  KDEKDLFDIMDDWL-RRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 69

Query: 147 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 206
           + S L G N ++ A+   + ++      +W          W   GG +  + LH    + 
Sbjct: 70  ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 129

Query: 207 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 266
            +M R++EL+  + +RP+ A+A+S P+A   +VFLIYP+GQ  +      G++  F F++
Sbjct: 130 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 189

Query: 267 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 326
            FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L  E  +  +    +   Q EE
Sbjct: 190 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 249

Query: 327 TYNIVAAH 332
           TY++V A+
Sbjct: 250 TYSMVTAN 251

[Close]

BLAST of CaUC02G033490 vs. TAIR 10
Match: ATCG00040.1 (maturase K )

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-13
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 30  MENS---NNATKKLDTLVPIITLLGSLAKAKFCNVFGHPISKPTWIDSSDFDIIDRFVQ 86
           +ENS   +N   KLD+ +PI +++GSLAK KFCNV GHPISK TW DSSD DI++RFV+
Sbjct: 370 LENSFLIDNVRIKLDSKIPISSIIGSLAKDKFCNVLGHPISKATWTDSSDSDILNRFVR 428

The following BLAST results are available for this feature:

BLAST of CaUC02G033490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB2069699.1	8.9e-151	86.67	hypothetical protein ES319_A08G109400v1, partial [Gossypium barbadense]	[more]
TYH05957.1	2.0e-150	86.67	hypothetical protein ES288_A08G120000v1 [Gossypium darwinii]	[more]
KAD5802925.1	2.8e-144	88.93	hypothetical protein E3N88_14285 [Mikania micrantha]	[more]
PHT94636.1	2.6e-142	46.58	hypothetical protein T459_02518 [Capsicum annuum]	[more]
AIW05415.1	1.1e-137	99.60	photosystem II protein D1 [Neobracea bahamensis]	[more]

BLAST of CaUC02G033490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4QJ96	3.3e-140	99.19	Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1	[more]
A4QJI0	3.3e-140	99.19	Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1	[more]
P02956	3.3e-140	99.19	Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1	[more]
A4QJZ9	3.3e-140	99.19	Photosystem II protein D1 OS=Arabis hirsuta OX=78191 GN=psbA PE=3 SV=1	[more]
P83755	3.3e-140	99.19	Photosystem II protein D1 OS=Arabidopsis thaliana OX=3702 GN=psbA PE=1 SV=2	[more]

BLAST of CaUC02G033490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5UQF9	4.3e-151	86.67	Photosystem II protein D1 (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A0...	[more]
A0A5D2FID8	9.6e-151	86.67	Photosystem II protein D1 OS=Gossypium darwinii OX=34276 GN=ES288_A08G120000v1 P...	[more]
A0A5N6P436	1.3e-144	88.93	Photosystem II protein D1 OS=Mikania micrantha OX=192012 GN=E3N88_14285 PE=3 SV=...	[more]
A0A2G3AK66	1.3e-142	46.58	32 kDa thylakoid membrane protein OS=Capsicum annuum OX=4072 GN=T459_02518 PE=3 ...	[more]
A0A0A0RU16	5.5e-138	99.60	Photosystem II protein D1 OS=Neobracea bahamensis OX=429518 GN=psbA PE=3 SV=1	[more]

BLAST of CaUC02G033490 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00020.1	2.3e-141	99.19	photosystem II reaction center protein A	[more]
ATCG00860.1	5.9e-68	85.63	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	5.9e-68	85.63	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG00270.1	7.3e-26	28.23	photosystem II reaction center protein D	[more]
ATCG00040.1	1.4e-13	61.02	maturase K	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PRINTS	PR00256	REACTNCENTRE	coord: 276..302 score: 37.92 coord: 188..216 score: 21.35 coord: 221..243 score: 20.91
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 107..325 e-value: 1.0E-83 score: 280.6
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	PHOTOSYSTEM II PROTEIN D1	coord: 122..331
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	PHOTOSYSTEM II PROTEIN D1	coord: 386..460
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 270..296
IPR024937	Domain X	PFAM	PF01348	Intron_maturas2	coord: 38..84 e-value: 3.4E-7 score: 30.3
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 484..540 e-value: 8.8E-25 score: 86.2 coord: 330..483 e-value: 1.3E-92 score: 311.0
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 80..266 e-value: 2.5E-42 score: 146.5
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 91..332
None	No IPR available	PANTHER	PTHR33149:SF30	PHOTOSYNTHETIC REACTION CENTRE, L/M-RELATED	coord: 122..331
None	No IPR available	PANTHER	PTHR33149:SF30	PHOTOSYNTHETIC REACTION CENTRE, L/M-RELATED	coord: 386..460

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G033490.1	CaUC02G033490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009635	response to herbicide
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
molecular_function	GO:0010242	oxygen evolving activity