CaUC02G033470 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G033470
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein Ycf2
Location	Ciama_Chr02: 9653656 .. 9654094 (+)
RNA-Seq Expression	CaUC02G033470
Synteny	CaUC02G033470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGTCCGCGACCTCTAGATACCGAAGGCATCCTTGGGGTGATCTCGTACTTCCTACGGGGTGGAGACGATGGGGTCGGTCCAGAAACACGGACATTCCTTGCTCATTATCAGATAATCACTTATTCACAAACCTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTCTAA

mRNA sequence

ATGGTCGATACCGAAGGCATCCTTGGGGTGATCTCGTACTTCCTACGGGGTGGAGACGATGGGGTCGGTCCAGAAACACGGACATTCCTTGCTCATTATCAGATAATCACTTATTCACAAACCTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATATGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTCTAA

Coding sequence (CDS)

ATGGTCGATACCGAAGGCATCCTTGGGGTGATCTCGTACTTCCTACGGGGTGGAGACGATGGGGTCGGTCCAGAAACACGGACATTCCTTGCTCATTATCAGATAATCACTTATTCACAAACCTCGTGTGGGGCTAATAGTTTTCATTTCCCATCTCATGGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACACGTTCCTGGATAACAAGCCTGAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATATGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTCTAA

Protein sequence

MVDTEGILGVISYFLRGGDDGVGPETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDDMTISTVTLIRSWSF

Homology

[Close]

BLAST of CaUC02G033470 vs. NCBI nr
Match: YP_009420838.1 (Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_009431686.1 Ycf2 [Citrullus rehmii] >YP_009431705.1 Ycf2 [Citrullus rehmii] >ASP44531.1 Ycf2 [Citrullus colocynthis] >ASP44534.1 Ycf2 [Citrullus colocynthis] >ASY96311.1 Ycf2 [Citrullus rehmii] >ASY96314.1 Ycf2 [Citrullus rehmii])

HSP 1 Score: 193.7 bits (491), Expect = 9.9e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. NCBI nr
Match: QZL38725.1 (Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhosus])

HSP 1 Score: 193.7 bits (491), Expect = 9.9e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. NCBI nr
Match: YP_009326033.1 (Ycf2 [Citrullus lanatus] >YP_009326052.1 Ycf2 [Citrullus lanatus] >YP_009348075.1 Ycf2 [Citrullus mucosospermus] >YP_009348094.1 Ycf2 [Citrullus mucosospermus] >YP_009431600.1 Ycf2 [Citrullus amarus] >YP_009431619.1 Ycf2 [Citrullus amarus] >APW82506.1 Ycf2 [Citrullus lanatus subsp. vulgaris] >APD52524.1 Ycf2 [Citrullus lanatus] >APD52544.1 Ycf2 [Citrullus lanatus] >APW82525.1 Ycf2 [Citrullus lanatus subsp. vulgaris] >APW82591.1 Ycf2 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 193.7 bits (491), Expect = 9.9e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. NCBI nr
Match: QIT04093.1 (Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX48604.1 hypothetical chloroplast RF21 [Luffa aegyptiaca] >QKX48623.1 hypothetical chloroplast RF21 [Luffa aegyptiaca])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1587 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1646

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLN FLDNKP+GFLIDDSDDIDD
Sbjct: 1647 YLATNSYLPFITVFLNKFLDNKPKGFLIDDSDDIDD 1682

[Close]

BLAST of CaUC02G033470 vs. NCBI nr
Match: YP_009468904.1 (hypothetical chloroplast RF2 [Gynostemma compressum] >YP_009468924.1 hypothetical chloroplast RF2 [Gynostemma compressum] >AVA29805.1 hypothetical chloroplast RF2 [Gynostemma compressum] >AVA29806.1 hypothetical chloroplast RF2 [Gynostemma compressum])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1584 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1643

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLN FLDNKP+GFLIDDSDDIDD
Sbjct: 1644 YLATNSYLPFITVFLNKFLDNKPKGFLIDDSDDIDD 1679

[Close]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.9e-46
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1587 ERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1646

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSY+PFITVFLN FLDNKP+GFLIDD DDIDD
Sbjct: 1647 YLATNSYVPFITVFLNKFLDNKPKGFLIDDRDDIDD 1682

[Close]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.9e-46
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1590 ERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1649

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSY+PFITVFLN FLDNKP+GFLIDD DDIDD
Sbjct: 1650 YLATNSYVPFITVFLNKFLDNKPKGFLIDDRDDIDD 1685

[Close]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.0e-45
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALS SRGILVIGSIGTGRSYLVK
Sbjct: 1596 ERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSLSRGILVIGSIGTGRSYLVK 1655

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSY+PFITVFLN FLDNKP+GFLIDDSDDIDD
Sbjct: 1656 YLATNSYVPFITVFLNKFLDNKPKGFLIDDSDDIDD 1691

[Close]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot
Match: B1NWJ3 (Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-44
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLA+YQ  TYSQTSCG NSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1582 ERRIFLAYYQTTTYSQTSCGVNSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1641

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPF+TVFLN FL+NKP+GFLIDDSDDIDD
Sbjct: 1642 YLATNSYLPFVTVFLNKFLNNKPKGFLIDDSDDIDD 1677

[Close]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot
Match: P08973 (Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 89/110 (80.91%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1436 ERRVFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1495

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDID---DMTISTVTLIRS 132
            YLATNSY+PFITVFLN FLDNKP+G LID SDDID   D  +  +T++ +
Sbjct: 1496 YLATNSYVPFITVFLNKFLDNKPKGSLIDASDDIDRDLDTELELLTMMNA 1545

[Close]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL
Match: A0A249RXF2 (Protein Ycf2 OS=Citrullus rehmii OX=260675 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL
Match: A0A1P8LED5 (Protein Ycf2 OS=Citrullus mucosospermus OX=519315 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL
Match: A0A343A8H4 (Protein Ycf2 OS=Citrullus lanatus OX=3654 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL
Match: A0A1P8LF93 (Protein Ycf2 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E RTFLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK
Sbjct: 1585 ERRTFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1644

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 121
            YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD
Sbjct: 1645 YLATNSYLPFITVFLNTFLDNKPEGFLIDDSDDIDD 1680

[Close]

BLAST of CaUC02G033470 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 174.1 bits (440), Expect = 7.6e-44
Identity = 87/100 (87.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSR ILVIGSIGTGRSYLVK
Sbjct: 1600 ERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVK 1659

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFL-----IDDSDDID 120
            YLATNSY+PFITVFLN FLDNKP+GF      IDDSDDID
Sbjct: 1660 YLATNSYVPFITVFLNKFLDNKPKGFFIDDIDIDDSDDID 1699

[Close]

BLAST of CaUC02G033470 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 174.1 bits (440), Expect = 7.6e-44
Identity = 87/100 (87.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 25   ETRTFLAHYQIITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 84
            E R FLAHYQ ITYSQTSCGANSFHFPSHGKPFSLRLALSPSR ILVIGSIGTGRSYLVK
Sbjct: 1600 ERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVK 1659

Query: 85   YLATNSYLPFITVFLNTFLDNKPEGFL-----IDDSDDID 120
            YLATNSY+PFITVFLN FLDNKP+GF      IDDSDDID
Sbjct: 1660 YLATNSYVPFITVFLNKFLDNKPKGFFIDDIDIDDSDDID 1699

The following BLAST results are available for this feature:

BLAST of CaUC02G033470 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009420838.1	9.9e-46	97.92	Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_00...	[more]
QZL38725.1	9.9e-46	97.92	Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhos...	[more]
YP_009326033.1	9.9e-46	97.92	Ycf2 [Citrullus lanatus] >YP_009326052.1 Ycf2 [Citrullus lanatus] >YP_009348075....	[more]
QIT04093.1	1.4e-44	95.83	Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX...	[more]
YP_009468904.1	1.4e-44	95.83	hypothetical chloroplast RF2 [Gynostemma compressum] >YP_009468924.1 hypothetica...	[more]

BLAST of CaUC02G033470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14F97	7.9e-46	92.71	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
A4GYV4	7.9e-46	92.71	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]
Q09WV7	3.0e-45	92.71	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
B1NWJ3	2.5e-44	89.58	Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1	[more]
P08973	4.3e-44	80.91	Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2	[more]

BLAST of CaUC02G033470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A343F2F1	4.8e-46	97.92	Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1	[more]
A0A249RXF2	4.8e-46	97.92	Protein Ycf2 OS=Citrullus rehmii OX=260675 GN=ycf2 PE=3 SV=1	[more]
A0A1P8LED5	4.8e-46	97.92	Protein Ycf2 OS=Citrullus mucosospermus OX=519315 GN=ycf2 PE=3 SV=1	[more]
A0A343A8H4	4.8e-46	97.92	Protein Ycf2 OS=Citrullus lanatus OX=3654 GN=ycf2 PE=3 SV=1	[more]
A0A1P8LF93	4.8e-46	97.92	Protein Ycf2 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf2 PE=3 SV=1	[more]

BLAST of CaUC02G033470 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	7.6e-44	87.00	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	7.6e-44	87.00	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 39..124 e-value: 1.1E-6 score: 30.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 46..124
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078:SF22	PROTEIN YCF2	coord: 25..121
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 25..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G033470.1	CaUC02G033470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity