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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ACCGACTTCTGACCAACCCGCGAAGGGTTGTGAAGTTGGACCAGGTACGAAGAATGAATCTATATCTGTGTACGGAAGTTGCTGGTCGGCGGCCGCTCAACTGTTTGAGCGTTTTCCTTTCTCCTATTATTAGAGTGGGGTGGTTGGTTCCGATTCGACAAGGGTCGAATACCTGGTCGAAGGTCCAGTACAGTAGGTAGCAAGCGTTTTCATTTTTGCTCCCCAGCGAGAACGAGAAATAGGCGATGCACCATCCTTGCAGCTACGTACGTTGACCTTGACTTGACAGATTCATCCAATTGAACCCACACTAAAAGGAGGACCACAAGCTCGGGGCTCGACGAAACGGAAAGTATCAGCATGTTGAAACTTCTTGGGGTTAGCAGTGAAAGAAAGAGCCCGGCATTCATTTCTTCATTCATATTCATAGCTTAGTCTACTAAAATCAAAGGGGGACCAGCCTCATCGTGGTAATTAGAGGACATCTTGGATTGTTCACCTTTAATGTGACACGTTCCCTCCCAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGGAGGCAAAGTCGTCCCCTCTACGGATCGAACCCCCTTTCTCTAATAAGTCGGAGGTCTTCGTAAACATGTTAAAGGGCTCCCGTCTTCGGCGGGTCACCTTTCCAAGACTGAGAAAGGCGAACATCTGGGCAAGGGAAAGCGCGGTGTGCCTGGTGCAAATGGCTTTCTTTTTTCATGATATACCAATCAGAATGGAGGGCCCCCCTACGTACATGATTGATAGAATCACTACG mRNA sequence ACCGACTTCTGACCAACCCGCGAAGGGTTGTGAAGTTGGACCAGGTACGAAGAATGAATCTATATCTGTGTACGGAAGTTGCTGGTCGGCGGCCGCTCAACTGTTTGAGCGTTTTCCTTTCTCCTATTATTAGAGTGGGGTGGTTGGTTCCGATTCGACAAGGGTCGAATACCTGGTCGAAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGGAGGCAAAGTCGTCCCCTCTACGGATCGAACCCCCTTTCTCTAATAAGTCGGAGGTCTTCGTAAACATGTTAAAGGGCTCCCGTCTTCGGCGGGTCACCTTTCCAAGACTGAGAAAGGCGAACATCTGGGCAAGGGAAAGCGCGGTGTGCCTGGTGCAAATGGCTTTCTTTTTTCATGATATACCAATCAGAATGGAGGGCCCCCCTACGTACATGATTGATAGAATCACTACG Coding sequence (CDS) ATGAATCTATATCTGTGTACGGAAGTTGCTGGTCGGCGGCCGCTCAACTGTTTGAGCGTTTTCCTTTCTCCTATTATTAGAGTGGGGTGGTTGGTTCCGATTCGACAAGGGTCGAATACCTGGTCGAAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGGAGGCAAAGTCGTCCCCTCTACGGATCGAACCCCCTTTCTCTAATAAGTCGGAGGTCTTCGTAAACATGTTAAAGGGCTCCCGTCTTCGGCGGGTCACCTTTCCAAGACTGAGAAAGGCGAACATCTGGGCAAGGGAAAGCGCGGTGTGCCTGGTGCAAATGGCTTTCTTTTTTCATGATATACCAATCAGAATGGAGGGCCCCCCTACGTACATGATTGATAGAATCACTACG Protein sequence MNLYLCTEVAGRRPLNCLSVFLSPIIRVGWLVPIRQGSNTWSKLYDQRDQSSLERGSFSSGEAKSSPLRIEPPFSNKSEVFVNMLKGSRLRRVTFPRLRKANIWARESAVCLVQMAFFFHDIPIRMEGPPTYMIDRITT
Homology
BLAST of CaUC02G033430 vs. NCBI nr
Match: GAU51027.1 (hypothetical protein TSUD_411680 [Trifolium subterraneum]) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-07 Identity = 45/91 (49.45%), Postives = 51/91 (56.04%), Query Frame = 0 Query: 44 LYDQRDQSSLERGSFSSGEAKSSPLRIEPPFSNKSEVFVN--MLKGSRLRRVTFPRLRKA 103 LYDQRDQS+ ERG SSGEAKSSPL IEP S + GS L + R+ Sbjct: 180 LYDQRDQSARERGYSSSGEAKSSPLLIEPSVRGSSSTCYEAPVFDGSPLLDLE----RRT 239
Query: 104 NIWARESAVCLVQMAFFFHDIPIRMEGPPTY 133 + + LVQMA FHDI IRM G PTY Sbjct: 240 SRKGKAHCAWLVQMALIFHDIAIRM-GDPTY 265
BLAST of CaUC02G033430 vs. ExPASy TrEMBL
Match: A0A2Z6PV29 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_411680 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 5.4e-08 Identity = 45/91 (49.45%), Postives = 51/91 (56.04%), Query Frame = 0 Query: 44 LYDQRDQSSLERGSFSSGEAKSSPLRIEPPFSNKSEVFVN--MLKGSRLRRVTFPRLRKA 103 LYDQRDQS+ ERG SSGEAKSSPL IEP S + GS L + R+ Sbjct: 180 LYDQRDQSARERGYSSSGEAKSSPLLIEPSVRGSSSTCYEAPVFDGSPLLDLE----RRT 239
Query: 104 NIWARESAVCLVQMAFFFHDIPIRMEGPPTY 133 + + LVQMA FHDI IRM G PTY Sbjct: 240 SRKGKAHCAWLVQMALIFHDIAIRM-GDPTY 265
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
GAU51027.1 | 1.1e-07 | 49.45 | hypothetical protein TSUD_411680 [Trifolium subterraneum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2Z6PV29 | 5.4e-08 | 49.45 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_411680 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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