CaUC02G032210 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G032210
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Cold regulated protein 27, putative isoform 2
Location	Ciama_Chr02: 6905947 .. 6911786 (-)
RNA-Seq Expression	CaUC02G032210
Synteny	CaUC02G032210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGGTTTGTGTAGATAAAAATATCTGGTTGACATTGGCGGAAGATATTTATATGGACGATGACGTGGAATTTAGCTGACGCTTTTTACACGTGTAAAAGCGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTTCAGTTCCATTTCCTCCTTCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGTAAATTCTGACTCTCTTTCTTGGTAGTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTGGTTTTTTTTCCTCGGTATGAACGAGTTTTTTGCGGATTGTACTTTGTTTTTTTGTTTCCCCTCTTTTGAACGTTTCACTAGGAGATTTTGTGACCTATTTTTTGGCCTCTCGAAACTTATATGTCTGATTATGAGTGATTCTGTTGCTTTTGTGGTGCTTTTAGGAATTTTTAATGGTAAATTGGTTTTTGGGTACCTCCCATTTGGGGTTATTTTAAATCTGTAAGACAGGGGGGGTACATATGTACTTGTTTATAACTGCAGTTTTTGTGTCATCTCTTTACCATTTTTCTGTTTTCCCCCTTTTCTTGAATGGCCGTGGAGAAGAAATTCTTTTGCAATGCTTGATTTATTATTTATCTTTTCCATTTGTATTAGTGTTTAGTGTTAGGGCTTATTCAAGATAATTCATGGACGAATTTTGAATTAATTAGGTCCCAATCGTTAACCATTTGGTTTTTAGTGTTTCAAAGTTAAGCTTTGTTTTTCTACTTTTTACCAATATTTTAAAAAACCAAGCCAAATTATTGAATGTGGAATGGTTTCGTTAAATTATCGATCAAAGTCAGTCATGTCTTCCAAATTTTGTGTTAATGGATACCGGTTTCTCAATTGAATACTTGTGAACAGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAACCAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGGTGAGGCAACACATCCATAGCAAGAGTGGGAGTGAGTTCCCTATCTCATTCCTCTACCTTCTTAATGATTTTTTCTTGTTATATTTTTTTTTAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTGATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATCCTAATACAATCATTACAGGTAATTTTGATTGATGTCATATGTTCTTGAAAGTTTCTCTTTCTATGACTTATATCTTTTTTATGTTGTTGGCTCTTTATGTACTCTTTTCTGTTGTTTGAGTAGTACATCTTCTACCCCTCAAGCTCCTCTCATAGTGACACACCTGAACACACCGTTCATGTTTTCCAAACCCCTTACTGGAGAAAGTTCTCCAGTCACTTTTTGTTGATTCTACCTTCTCTAATATGCTTAAAATTTGTAATCTCTATCCTCGTTATGCATATACACTTCATATTTTGTTGTTGGGAACTGTGATCTTCCAATCAAATTTTGTAATGGTGAAGATGTTTGCAAAAATTACTTTAGTAGTAGTATTCCCCTTTAGCACCATTTAGATGCACTCACTTTTCTGATTTAATTTTGTGTCGGTGTACCAATATGATCATTACTATGTGATATTCCCACTAGTTTGCCACACCACATTGCCCGCACCACTTAAAGTTCTGCAAATCTTCTTTCCAATATTATTACGTGTTTGTTTGAATTTTGATCACATGTATGACTTGAGCATGTGAGTTGTAAAATTTGTACGTCAAGCATAGGATATTGTGTTATCTTCTTAGTAATGGAAAATCTATATTTTCTAGTATATTAACCAGATATTTCAACATGGTTTTCAGTGTTGTGATAGCTTTTTTCCCATAACATGATTTTTAGTGTTTATGCCAGGGTTATGAGATCTAACGTCACAATTCTTCATGCTATTTCACAATTAAGAATTCATGGATTAACTGATTGCATAACTTTTCTATTTGAAGTTGTTTGATGTGTATTTATAAGTGAAAAAGTAGAAGTCCTTTATTTAAAGTTAGATGAGCACTTTTTGTACGTTGTATTAGTGGAAAAAACAAATAAAAACTAAGTAGACCTGACTAGGATGGATTGCATTCTGGATATTGATGAACTACTAGATGAAGCCAGGCTGATGGTACTAATTCTAGGACAGTAGCTGTTTAGGAATGAATCAAAGCTTTTGGGATGACAACATTTTTGGTCAAATTGGAGGAGCCATGAAGCATAAAGAATTAGCCTTCTTAATGAATGAAAATGATTCTGATAGAAATAGCTACTTCGATATTGGAGTTGAAGGAAGAGAAAAGAGCAGTTATGGTTGTGGCGACACTCTAATGTGTCTTAATTTAAGAAATTCTCATAAAGATCTTTATTTCTACTTTGAATAGTTATAAACATTCCTGTAGAGTCGAGAACCTGTTGAAGAATAGTTTTCTTGTTATGGATCAAATAAACGACATAATAATTTAAATCTTTGTGCATAAGGAGACTTAAAGCTTACCTCTTAGCTTCTACAAAGCTGAATGATTCCTAGATTCATAATTCAGCAAGAAATAACAAATAGCTGTTTCTTAATGGGTACAATCCTGTTTGTCTAATTAAAGGATCAAATATCTAGGCCGAGATGCCAAATGGCAAATTCTTCCCATCTCATTTAAGGTGCATGCTACCGTACTCCCTGTTAAAGAAGTCTCCCTAACATAGTTACCTTGAAGTTTAAAATCTATCTATTTTTTGAAATTGAAATGGAAACGAAACTTTTCATTGATACAATGAAGAAAAGTAGCTCAATTACAAAGAAACAAAATATCCAAAAAAGTAAATGAATTTAAAATATATCGATTTAATAAGATTCATCATTAGGAAGTTATTGATGCTACAAACGTTATTAATGCCATTGCAATGTTCAATTTGATTTTCCTGTCATCATACTAACCTGGAGTCTTTTATCTCTTCATTTTGTCTTCTATGCAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGACTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTTAATCTCCAGATTACCTTCTGATTTCACTTTGGAAAACATATAATTGCATTGTATGAGTGATCTGAAACCGAATATGCTGCCGTTTGATCTCTTAGGTTGTACCATCTAAAAGATTATCAAAAAGATAAAACCCAGACACCATATTGTCTTCAGAACAAAGATTGTCAGAGGCCATATTGTCTTCAGAACATCCTCAAAGTCAAAACTTGTGCGTCCAAATTCAGATTTGTGTTACTGTGTGAGAGGGAGCTGACAACAATTCATTTCAACAGGTGAAAATACCTGGCTGTTCAAGCTCATTAACAAAATACGACATGGTTCTCTTTCCTTTTTGAAAGAGCATTGTAAAGAAAATAAGGGAATTGACAGGTAATAATTCTACCAGAAGATTTGCGGCAGGAAGGAGAAAATATGTTTGTGTATGGTACAAACTGAACTTTTTCCTAGTTCAAATATTGAGTGAAATATATGTTAATCCTTTCTTTTCCCCTGTTTTCCTTTTTCTTGGAGTTTGAAAAGATGGAAATTCTACTAGATGTAGGGCATGAATATACAAGTTATAGAGAAGCTAGACAACACCCTGATAGTGAGATAGATACACACCCTTTTTTTTATTTGTTTGCACTACTCTCATTTTGAAGTTCTCAAGTGTAAATCATTACATAAAGCAAAGTGTCACGCTTTTGTGACGCGGAAAGAGAATTGAACAAGTTTATTGATTTTCTTTAGCGGGTAAAGTTTTTTCATTGTATTGTATCCTGGCGTTTTCACAATTATTTGATATTTGTACTTGTGTTGGTAGCAATTGTAATTTTTACTGCAACTTAGCTTCAGCTAGAGCTTGTTCTCACTCTGCTGCTAGGTGGCAACATTTGTGTTCAAGGGATTTTGAGGACAAAGTTAGATAATGAAATAGTAGAGCTTTTCTCTTGTTTATGTTATGGAGTGCATCTCAGATGGTTGATGACAATTTACTTACGTTAAGTGCTTGATTAATGTGTGATTTTATTCCACCAAGTAAAACTCTCGATAAACAATTTTGTTAAGCAATTGGAAGAGTGCGTGAGTATTTGTTAGTGCTATGTTTGTTTGGATCCCTTTTTTTGCCTTTTTTGTTGGCTAACTTTGGCCTCTTTTCCTAGAAACCAAGTTCTTTTGAATCTATGGTGAAATTGATAGTAGTTTTAGTATTTTAGGGTGGCATAAAACCATCCTCTAGTTTTAGTATTTGTGGAGTAATGTTGGTGCCAAATTTTAAGGTGACAGAATTGAGGCGAGCTTTTTGACTAGAGGATGGTTTAGTTCTGCTTTCAGTGACACATTCTAAGGGAATCACTGGATGAGGTGGTAGTCACCAAAAGGTGATGGTGCACGATCATATTTGATCGGTCAATGGAAGGAAGGGCTGGGTGTTCTATTGAGTCGTTATTGACTTTCTTCTAGATCATGTGACATGGCTGATGCAGGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTGGAGATGGATGTG

mRNA sequence

ATGGTAAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTTCAGTTCCATTTCCTCCTTCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAACCAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTGATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATCCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGACTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGCTAGAGCTTGTTCTCACTCTGCTGCTAGGTGGCAACATTTGTGTTCAAGGGATTTTGAGGACAAAGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTGGAGATGGATGTG

Coding sequence (CDS)

ATGGTAAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTTCAGTTCCATTTCCTCCTTCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAACCAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTGATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATCCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGACTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGCTAGAGCTTGTTCTCACTCTGCTGCTAGGTGGCAACATTTGTGTTCAAGGGATTTTGAGGACAAAGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTGGAGATGGATGTG

Protein sequence

MVSAHVEPFYLGFAPKKNTPPFTSSLSLPLHFSTSLNPQRVSDLNFLPPFSVPFPPSIFGSFDRFPLVFHPSVMADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASSDSSGNDQLELVLTLLLGGNICVQGILRTKGIHSTKDGASGGPKISSWELLFEKLATFILVSLLSIVEMDV

Homology

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BLAST of CaUC02G032210 vs. NCBI nr
Match: XP_038887003.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.8e-108
Identity = 204/246 (82.93%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLD 133
           M  SHT SSISPPPL DRRQSLMPPSA+DSTR  SQS SSSIT+DGSN F + +HSLQLD
Sbjct: 1   MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLD 60

Query: 134 AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMILQD 193
           AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRR ALS  QK+  KP MPNI+SSELMILQD
Sbjct: 61  AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPNISSSELMILQD 120

Query: 194 ASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRI 253
           ASWQKANIGRNDP LD TADSPAILEDLWINRFPSAGKQCT E PD+LEECG+CSDRR +
Sbjct: 121 ASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHL 180

Query: 254 RNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASSDS 313
           RNT+NSCGSARSSQQIPPCC D N IITEVSDQNFVDD P ELSG + IAKRL+K SSDS
Sbjct: 181 RNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDS 240

Query: 314 SGNDQL 320
           SGNDQ+
Sbjct: 241 SGNDQV 246

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BLAST of CaUC02G032210 vs. NCBI nr
Match: XP_008454952.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-95
Identity = 190/248 (76.61%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+ QK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR+ TNSCGSAR+SQQ  PCC +  TIITEVSDQNFVD+ PGELSG M  AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 314 DSSGNDQL 320
               N Q+
Sbjct: 241 GFLDNAQV 246

[Close]

BLAST of CaUC02G032210 vs. NCBI nr
Match: KAA0031301.1 (Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK06753.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 3.0e-95
Identity = 190/247 (76.92%), Postives = 205/247 (83.00%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+ QK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR+ TNSCGSAR+SQQ  PCC +  TIITEVSDQNFVD+ PGELSG M  AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 314 DSSGNDQ 319
               N Q
Sbjct: 241 GFLDNAQ 245

[Close]

BLAST of CaUC02G032210 vs. NCBI nr
Match: XP_004136978.1 (cold-regulated protein 27 isoform X1 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.5e-91
Identity = 185/248 (74.60%), Postives = 204/248 (82.26%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  Q
Sbjct: 1   MGDSHTPSFLS-PPLAD-RQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS  QK+RRKPI P+I+SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR  TNSC SAR+SQ   PCC +  TIITEVSDQNFVD+ PGELS  M IAKRL+KASS
Sbjct: 181 HIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASS 240

Query: 314 DSSGNDQL 320
           D S + Q+
Sbjct: 241 DFSDSAQV 246

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BLAST of CaUC02G032210 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-87
Identity = 175/255 (68.63%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 133
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 134 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMI 193
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+ QK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 194 LQDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDR 253
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CSDR
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 254 RRIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKAS 313
             IRN TNS  SARSSQQIPPCC D +TI+TEVSDQNFVD  PGELS    I KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 314 SDSSGNDQLELVLTL 326
           SDSSGN++++L + +
Sbjct: 241 SDSSGNNRVKLGIAI 253

[Close]

BLAST of CaUC02G032210 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-09
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 0


Query: 103 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 162
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 163 HQHRRRDALSTNQKIR--------RKPIMPNITSSELMILQDASWQKANIGRNDPLLD-- 222
             +    AL  N+ +         RKP     +  +  +L D  WQK N+ + +  ++  
Sbjct: 71  --YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGR 130

Query: 223 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRNTTNSCGSARSSQQI 282
           +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+
Sbjct: 131 HGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQL 190

Query: 283 PPCCHDPNTII---TEVSDQNFVDDCPGELSGAMTIAKRLRKA-SSDSSGNDQL 320
                D + I     EVSDQNFV++    + G    +K+++    S+SS  DQ+
Sbjct: 191 SSHSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of CaUC02G032210 vs. ExPASy Swiss-Prot
Match: Q8L983 (Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.6e-05
Identity = 64/236 (27.12%), Postives = 101/236 (42.80%), Query Frame = 0


Query: 99  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 158
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 159 LHQ---------HRRRDALSTNQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 218
           L+           R RD  S + K          ++ +  +LQ+  WQK N G+    L+
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGKKQSCLE 144

Query: 219 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRN---TTNSCGSARSS 278
            +++           RF                       R  +RN    +N   +  ++
Sbjct: 145 TSSEF----------RF----------------------HRNSLRNKPENSNGNYTMGTT 204

Query: 279 QQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASSDSSGNDQLELV 323
            Q    CHD  T  +E S QNF ++   E  G ++  KR R+A++D S   + ++V
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQVV 209

[Close]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 190/248 (76.61%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+ QK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR+ TNSCGSAR+SQQ  PCC +  TIITEVSDQNFVD+ PGELSG M  AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 314 DSSGNDQL 320
               N Q+
Sbjct: 241 GFLDNAQV 246

[Close]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 190/247 (76.92%), Postives = 205/247 (83.00%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+ QK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR+ TNSCGSAR+SQQ  PCC +  TIITEVSDQNFVD+ PGELSG M  AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 314 DSSGNDQ 319
               N Q
Sbjct: 241 GFLDNAQ 245

[Close]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL
Match: A0A0A0K7Z2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 7.4e-92
Identity = 185/248 (74.60%), Postives = 204/248 (82.26%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 133
           M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  Q
Sbjct: 1   MGDSHTPSFLS-PPLAD-RQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQ 60

Query: 134 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMIL 193
           LDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS  QK+RRKPI P+I+SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVL 120

Query: 194 QDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRR 253
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CSDRR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRR 180

Query: 254 RIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASS 313
            IR  TNSC SAR+SQ   PCC +  TIITEVSDQNFVD+ PGELS  M IAKRL+KASS
Sbjct: 181 HIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASS 240

Query: 314 DSSGNDQL 320
           D S + Q+
Sbjct: 241 DFSDSAQV 246

[Close]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL
Match: A0A6J1GKR5 (uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 8.5e-88
Identity = 175/255 (68.63%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 133
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 134 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMI 193
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+ QK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 194 LQDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDR 253
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CSDR
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 254 RRIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKAS 313
             IRN TNS  SARSSQQIPPCC D +TI+TEVSDQNFVD  PGELS    I KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 314 SDSSGNDQLELVLTL 326
           SDSSGN++++L + +
Sbjct: 241 SDSSGNNRVKLGIAI 253

[Close]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 4.2e-87
Identity = 174/249 (69.88%), Postives = 198/249 (79.52%), Query Frame = 0


Query: 74  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 133
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 134 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTNQKIRRKPIMPNITSSELMI 193
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+ QK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 194 LQDASWQKANIGRNDPLLDNTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDR 253
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CSDR
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 254 RRIRNTTNSCGSARSSQQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKAS 313
             IRN TNS  SARSSQQIPPCC D +TI+TEVSDQNFVD  PGELS    I KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 314 SDSSGNDQL 320
           SDSSGN+++
Sbjct: 241 SDSSGNNRV 247

[Close]

BLAST of CaUC02G032210 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-10
Identity = 68/233 (29.18%), Postives = 109/233 (46.78%), Query Frame = 0


Query: 103 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 162
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 163 HQHRRRDALSTNQKIR--------RKPIMPNITSSELMILQDASWQKANIGRNDPLLD-- 222
             +    AL  N+ +         RKP     +  +  +L D  WQK N+ + +  ++  
Sbjct: 71  --YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGR 130

Query: 223 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRNTTNSCGSARSSQQI 282
           +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+
Sbjct: 131 HGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQL 190

Query: 283 PPCC--HDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKA-SSDSSGNDQL 320
                 HD  ++  EVSDQNFV++    + G    +K+++    S+SS  DQ+
Sbjct: 191 SSHSRDHDQISVGEEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 228

[Close]

BLAST of CaUC02G032210 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-10
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 0


Query: 103 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 162
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 163 HQHRRRDALSTNQKIR--------RKPIMPNITSSELMILQDASWQKANIGRNDPLLD-- 222
             +    AL  N+ +         RKP     +  +  +L D  WQK N+ + +  ++  
Sbjct: 71  --YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGR 130

Query: 223 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRNTTNSCGSARSSQQI 282
           +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+
Sbjct: 131 HGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQL 190

Query: 283 PPCCHDPNTII---TEVSDQNFVDDCPGELSGAMTIAKRLRKA-SSDSSGNDQL 320
                D + I     EVSDQNFV++    + G    +K+++    S+SS  DQ+
Sbjct: 191 SSHSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of CaUC02G032210 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-10
Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 0


Query: 103 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 162
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 163 HQHRRRDALSTNQKIR--------RKPIMPNITSSELMILQDASWQKANIGRNDPLLD-- 222
             +    AL  N+ +         RKP     +  +  +L D  WQK N+ + +  ++  
Sbjct: 71  --YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGR 130

Query: 223 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRNTTNSCGSARSSQQI 282
           +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+
Sbjct: 131 HGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQL 190

Query: 283 PPCCHDPNTII---TEVSDQNFVDDCPGELSGAMTIAKRLRKA-SSDSSGNDQL 320
                D + I     EVSDQNFV++    + G    +K+++    S+SS  DQ+
Sbjct: 191 SSHSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of CaUC02G032210 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06
Identity = 64/236 (27.12%), Postives = 101/236 (42.80%), Query Frame = 0


Query: 99  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 158
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 159 LHQ---------HRRRDALSTNQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 218
           L+           R RD  S + K          ++ +  +LQ+  WQK N G+    L+
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGKKQSCLE 144

Query: 219 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRN---TTNSCGSARSS 278
            +++           RF                       R  +RN    +N   +  ++
Sbjct: 145 TSSEF----------RF----------------------HRNSLRNKPENSNGNYTMGTT 204

Query: 279 QQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASSDSSGNDQLELV 323
            Q    CHD  T  +E S QNF ++   E  G ++  KR R+A++D S   + ++V
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQVV 209

[Close]

BLAST of CaUC02G032210 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06
Identity = 64/236 (27.12%), Postives = 101/236 (42.80%), Query Frame = 0


Query: 99  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 158
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 159 LHQ---------HRRRDALSTNQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 218
           L+           R RD  S + K          ++ +  +LQ+  WQK N G+    L+
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGKKQSCLE 144

Query: 219 NTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSDRRRIRN---TTNSCGSARSS 278
            +++           RF                       R  +RN    +N   +  ++
Sbjct: 145 TSSEF----------RF----------------------HRNSLRNKPENSNGNYTMGTT 204

Query: 279 QQIPPCCHDPNTIITEVSDQNFVDDCPGELSGAMTIAKRLRKASSDSSGNDQLELV 323
            Q    CHD  T  +E S QNF ++   E  G ++  KR R+A++D S   + ++V
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQVV 209

The following BLAST results are available for this feature:

BLAST of CaUC02G032210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887003.1	1.8e-108	82.93	cold-regulated protein 27 isoform X1 [Benincasa hispida]	[more]
XP_008454952.1	2.3e-95	76.61	PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]	[more]
KAA0031301.1	3.0e-95	76.92	Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK067...	[more]
XP_004136978.1	1.5e-91	74.60	cold-regulated protein 27 isoform X1 [Cucumis sativus]	[more]
XP_022952080.1	1.7e-87	68.63	uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]	[more]

BLAST of CaUC02G032210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	4.4e-09	29.06	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]
Q8L983	6.6e-05	27.12	Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1	[more]

BLAST of CaUC02G032210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZU8	1.1e-95	76.61	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C4A3	1.4e-95	76.92	Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0K7Z2	7.4e-92	74.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1	[more]
A0A6J1GKR5	8.5e-88	68.63	uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GJA3	4.2e-87	69.88	uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CaUC02G032210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	1.1e-10	29.18	cold regulated gene 27	[more]
AT5G42900.1	3.1e-10	29.06	cold regulated gene 27	[more]
AT5G42900.2	3.1e-10	29.06	cold regulated gene 27	[more]
AT4G33980.1	4.7e-06	27.12	BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G429...	[more]
AT4G33980.2	4.7e-06	27.12	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..89
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 92..318
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 92..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G032210.1	CaUC02G032210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold