CaUC02G031220 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G031220
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein RADIALIS-like 1
Location	Ciama_Chr02: 5493666 .. 5494839 (-)
RNA-Seq Expression	CaUC02G031220
Synteny	CaUC02G031220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCGAAACTCTACGAGATCGAGTCGTTGATCGCTGAGGAAACGAGGTAATATATGTTAAATCACCATTGAACTTAAAAGTTTTTTTTTTTTTTTTGTTTAATTGATGAACTGAATTCAAAAGCTTATGTTTTATTCGTTATAATTAATTTAATATTTATCAATAATATCTGAGTACTCCTCATCACTTATGGGGTTTAGGAATATTAATAATATTAATTATGGAGAGGAAATGACATTATAAGAGTTTTTGGACAAAGACATCTTATACTTCAATATCATGTTAAATTACTACTAAGCTTAAAAATTCAAAATATATGGTAACAAAATATATATATATAAACTTTGGGTTATAGTAAAATACATATAACACTATTGTTGCTTTTAAGTTTTGACTCTCTTTCTATAAATATATATTTTTGCAAGGAATAACTTCTACAAATATATATCTTCATCGAGGTTATAAAATGAAGTAAATTTATTATAATATAAAGATTTGTTGTTTTAGCTAAATGATAATTTAACATGGTATAAGAGTAGACATAGTGAAAAGCGAACCATTTAAAATCACTTTATTATTTTTTGTTTTTTTTATTAGAGTGGTATGCAAAATAAATGGATCTAAAATTAAAGAATATTTATGAAGGTCAAGTTATAATATGAACAAAGAGAGTATTATGGTAACGTAGTAATATCATGAACTAAATATTTGGTTTTTTCTTTTTCTCAGGATGTGAGTAACATTCGTAGTTGAAATGAGCCAGCTCATGCAGTATGGAAGAATAAAGGAATGAAGGAAGAAGAACCATTTGCTCTCTATTGTACTACCCTTTAAATGTAACTGTAAAGTAGAATTATTGAGAGAATAATATTTATTGGTGTTTTCTTTTTTGAAAAAATGTGAACCATTTTCAATGTATTTAGTTCATTAAATACAACTAGATTAATCCATCTATATA

mRNA sequence

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCGAAACTCTACGAGATCGAGTCGATGTGAGTAACATTCGTAGTTGAAATGAGCCAGCTCATGCAGTATGGAAGAATAAAGGAATGAAGGAAGAAGAACCATTTGCTCTCTATTGTACTACCCTTTAAATGTAACTGTAAAGTAGAATTATTGAGAGAATAATATTTATTGGTGTTTTCTTTTTTGAAAAAATGTGAACCATTTTCAATGTATTTAGTTCATTAAATACAACTAGATTAATCCATCTATATA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCGAAACTCTACGAGATCGAGTCGATGTGAGTAA

Protein sequence

MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRNSTRSSRCE

Homology

[Close]

BLAST of CaUC02G031220 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 70/81 (86.42%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYRNSTRSSR 82
          V HIE+G+IPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of CaUC02G031220 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VKHIESGEIPFPYRNSTR 79
          VKHIESGEI FPYR+STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of CaUC02G031220 vs. NCBI nr
Match: XP_022972544.1 (protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like 1 [Cucurbita maxima])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTP+RW+NVAKAIGGKTE+EVKRHYQLLV D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPDRWVNVAKAIGGKTEDEVKRHYQLLVND 60

Query: 61 VKHIESGEIPFPYRNSTR 79
          VKHIESGEI FPYR+STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of CaUC02G031220 vs. NCBI nr
Match: XP_022952273.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG7011709.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYRNST 78
          VKHIESG +PFPYRNS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]

BLAST of CaUC02G031220 vs. NCBI nr
Match: KAG6572041.1 (Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYRNST 78
          VKHIESG +PFPYRNS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-23
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP-YRNS 77
            IE+G +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-23
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YRNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-21
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS    G   W+  ENKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HY++LVED
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VKHIESGEIPFPYRNST 78
          +K+IESG++PFP   +T
Sbjct: 61 IKYIESGKVPFPNYRTT 76

[Close]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-21
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   S++WT  ENK FE+ALA YDQDTP+RW NVA+A+GGK+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGEIPFP-YRNS 77
          V  IESG  P P YR++
Sbjct: 61 VNDIESGRYPHPNYRSN 77

[Close]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-21
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YRNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYRNSTRSSR 82
          V HIESG+IPFPYR STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL
Match: A0A1S3BGF0 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33
Identity = 70/81 (86.42%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYRNSTRSSR 82
          V HIE+G+IPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL
Match: A0A6J1GKV1 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.3e-32
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VKHIESGEIPFPYRNSTR 79
          VKHIESGEI FPYR+STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL
Match: A0A6J1I8Y0 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471083 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTP+RW+NVAKAIGGKTE+EVKRHYQLLV D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPDRWVNVAKAIGGKTEDEVKRHYQLLVND 60

Query: 61 VKHIESGEIPFPYRNSTR 79
          VKHIESGEI FPYR+STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL
Match: A0A6J1GK35 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYRNST 78
          VKHIESG +PFPYRNS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]

BLAST of CaUC02G031220 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YRNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of CaUC02G031220 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP-YRNS 77
            IE+G +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of CaUC02G031220 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YRNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of CaUC02G031220 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YRNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of CaUC02G031220 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   SS+WT  +NK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP 73
          + +IE   +P P
Sbjct: 61 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of CaUC02G031220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447026.1	6.0e-33	86.42	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_022952660.1	1.9e-31	89.74	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li...	[more]
XP_022972544.1	5.6e-31	88.46	protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like...	[more]
XP_022952273.1	1.2e-30	85.71	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-li...	[more]
KAG6572041.1	1.2e-30	85.71	Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CaUC02G031220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	2.6e-23	65.79	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	2.6e-23	63.29	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q58FS3	1.9e-21	61.04	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q6NNN0	5.4e-21	62.34	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q1A173	5.4e-21	60.98	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]

BLAST of CaUC02G031220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3K0	3.4e-34	90.12	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S...	[more]
A0A1S3BGF0	2.9e-33	86.42	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1	[more]
A0A6J1GKV1	9.3e-32	89.74	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1	[more]
A0A6J1I8Y0	2.7e-31	88.46	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471083 PE=4 SV=1	[more]
A0A6J1GK35	6.0e-31	85.71	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1	[more]

BLAST of CaUC02G031220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	1.9e-24	63.29	Homeodomain-like superfamily protein	[more]
AT4G39250.1	1.9e-24	65.79	RAD-like 1	[more]
AT1G75250.1	3.9e-22	60.98	RAD-like 6	[more]
AT1G75250.2	3.9e-22	60.98	RAD-like 6	[more]
AT1G19510.1	3.3e-21	62.50	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 1.0E-8 score: 45.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 10..58 score: 6.330165
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..58 e-value: 5.30927E-8 score: 42.9478
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 2.3E-23 score: 83.8
None	No IPR available	PANTHER	PTHR43952:SF68	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..79
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 10..56 e-value: 3.5E-7 score: 30.3
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..79
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G031220.1	CaUC02G031220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity