CaUC02G030590 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA MGLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL Homology
BLAST of CaUC02G030590 vs. NCBI nr
Match: KAE8645661.1 (hypothetical protein Csa_020412 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of CaUC02G030590 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28 Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of CaUC02G030590 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.7 bits (317), Expect = 9.0e-26 Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of CaUC02G030590 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 9.0e-26 Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of CaUC02G030590 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 3.4e-25 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.5e-19 Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.2e-18 Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-17 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17 Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32 Identity = 69/90 (76.67%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.4e-29 Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.0e-27 Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26 Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.2e-25 Identity = 60/85 (70.59%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of CaUC02G030590 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of CaUC02G030590 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 90.1 bits (222), Expect = 8.7e-19 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CaUC02G030590 vs. TAIR 10
Match: AT4G38850.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of CaUC02G030590 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 88.6 bits (218), Expect = 2.5e-18 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of CaUC02G030590 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 87.8 bits (216), Expect = 4.3e-18 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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