CaUC02G030590 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G030590
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionauxin-responsive protein SAUR24-like
LocationCiama_Chr02: 4648125 .. 4648370 (-)
RNA-Seq ExpressionCaUC02G030590
SyntenyCaUC02G030590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA

mRNA sequence

ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA

Coding sequence (CDS)

ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTACTTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTGATCTCTCAGTTAAATCAACAACTATGA

Protein sequence

MGLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL
Homology
BLAST of CaUC02G030590 vs. NCBI nr
Match: KAE8645661.1 (hypothetical protein Csa_020412 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0

Query: 5   HLLRR-SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTF 64
           H ++R S VPKGYCAVYVGENQKK+FVIP+TYLNQPC QDLL Q T EF+YYHPMGGLTF
Sbjct: 622 HQMKRVSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEEFEYYHPMGGLTF 681

Query: 65  HCKDDIFTDLISQLNQQL 82
           HC DDIF DLIS LN+QL
Sbjct: 682 HCSDDIFADLISHLNEQL 699

BLAST of CaUC02G030590 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          MGLR LL+R    S+VPKGYCAVYVGE+QKK+FVIP++YLNQPC Q+LL QA  EF YYH
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTFHCKDDIFTDLISQLN 79
          PMGGLT HC+DDIFTDLIS+LN
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLN 82

BLAST of CaUC02G030590 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.7 bits (317), Expect = 9.0e-26
Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGE 60
          M L  LLRR S         VPKGYCAVYVGE QKK+FVIPVTYLNQPC QDLL QA  E
Sbjct: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60

Query: 61 FDYYHPMGGLTFHCKDDIFTDLISQLNQ 80
          F YYHPMGGLT  C++DIFT+LISQLN+
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNR 88

BLAST of CaUC02G030590 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 9.0e-26
Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          M L HLL+R    SS+PKGYCAVYVGE+QKK+F+IP++YLNQPC Q+LL Q   EF Y+H
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTFHCKDDIFTDLISQLN 79
          PMGGLT HCKD IFT+LIS+LN
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLN 82

BLAST of CaUC02G030590 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.4e-25
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          MG+R LL+R    S++PKGYCAVYVGENQKK+FVIP+T+LNQ C Q+LL Q   +F Y+H
Sbjct: 1  MGIRQLLKRNQGVSTIPKGYCAVYVGENQKKRFVIPITHLNQSCFQELLSQTEEKFGYHH 60

Query: 61 PMGGLTFHCKDDIFTDLISQ 77
          PMGGLT HC+DDIFTDLIS+
Sbjct: 61 PMGGLTIHCRDDIFTDLISR 80

BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.5e-19
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 2  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGL 61
          G+R   + +  PKGY AVYVGE + K+FVIPV+YLNQP  QDLL QA  EF Y HPMGGL
Sbjct: 7  GIRKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGL 66

Query: 62 TFHCKDDIFTDLISQLN 79
          T  C +D+F  + S LN
Sbjct: 67 TIPCSEDVFQCITSCLN 82

BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-18
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0

Query: 13 PKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTD 72
          PKGY AVYVGEN K+ FVIPV++LNQP  QDLL QA  EF Y HPMGGLT  C +D+F  
Sbjct: 26 PKGYLAVYVGENMKR-FVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQH 85

Query: 73 LISQLNQQ 81
          + S L+ Q
Sbjct: 86 ITSCLSAQ 92

BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-17
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0

Query: 1  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          +G + ++RR  SS P+G+ AVYVGEN  +KK++V+PV+YLNQP  Q LL ++  EF Y H
Sbjct: 8  LGAKQIIRRESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDH 67

Query: 61 PMGGLTFHCKDDIFTDLISQL 78
          PMGGLT  C + +F  + SQ+
Sbjct: 68 PMGGLTIPCHESLFFTVTSQI 88

BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 0

Query: 2  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGL 61
          G+R        PKGY AVYVGE  K+ FVIPV+Y+NQP  QDLL QA  EF Y HPMGGL
Sbjct: 7  GIRKASNAVDAPKGYLAVYVGEKMKR-FVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGL 66

Query: 62 TFHCKDDIFTDLISQLN 79
          T  C +++F  +   LN
Sbjct: 67 TIPCSEEVFQRITCCLN 82

BLAST of CaUC02G030590 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 1  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYY 60
          +G + +L R     S+ PKG+ AVYVGE+QKK++++PV+YLNQP  Q LL ++  EF + 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTFHCKDDIFTDLISQL 78
          HPMGGLT  C +D F ++ S+L
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 69/90 (76.67%), Postives = 73/90 (81.11%), Query Frame = 0

Query: 1  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGE 60
          MGLR LLRRSS         VPKGYCAVYVGENQKK+FVIP+TYLNQPC QDLL Q T E
Sbjct: 1  MGLRRLLRRSSMNGNQRVSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEE 60

Query: 61 FDYYHPMGGLTFHCKDDIFTDLISQLNQQL 82
          F+YYHPMGGLTFHC DDIF DLIS LN+QL
Sbjct: 61 FEYYHPMGGLTFHCSDDIFADLISHLNEQL 90

BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.4e-29
Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          MGLR LL+R    S+VPKGYCAVYVGE+QKK+FVIP++YLNQPC Q+LL QA  EF YYH
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTFHCKDDIFTDLISQLN 79
          PMGGLT HC+DDIFTDLIS+LN
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLN 82

BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.0e-27
Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          M L+HLL+R    S+VPKGYCAVYVGE+QKK+FVIP+TYLN+PC Q LL Q   EF YYH
Sbjct: 1  MRLQHLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEEFGYYH 60

Query: 61 PMGGLTFHCKDDIFTDLISQLN 79
          PMGGLT HC+DDIFTDLIS +N
Sbjct: 61 PMGGLTIHCRDDIFTDLISNMN 82

BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26
Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0

Query: 1  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          M L HLL+R    SS+PKGYCAVYVGE+QKK+F+IP++YLNQPC Q+LL Q   EF Y+H
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTFHCKDDIFTDLISQLN 79
          PMGGLT HCKD IFT+LIS+LN
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLN 82

BLAST of CaUC02G030590 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-25
Identity = 60/85 (70.59%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 1  MGLRHLLRRSS------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDY 60
          M +  LLRR+S      VPKGYCAVYVGE QKK+FVIPVTYLNQPC Q LL QA  EF Y
Sbjct: 1  MRILQLLRRASKEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEEFGY 60

Query: 61 YHPMGGLTFHCKDDIFTDLISQLNQ 80
          YHPMGGLT  C++DIFT+LISQLN+
Sbjct: 61 YHPMGGLTIQCREDIFTNLISQLNR 85

BLAST of CaUC02G030590 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0

Query: 12 VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFT 71
          VPKGY AVYVGE   K+FV+PV+YL+QP  QDLL +A  EF + HPMGGLT  C ++IF 
Sbjct: 33 VPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFI 92

Query: 72 DLISQLN 79
          DL S+ N
Sbjct: 93 DLASRFN 99

BLAST of CaUC02G030590 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.1 bits (222), Expect = 8.7e-19
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 3  LRHLLRRSSVPKGYCAVYVGE-NQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGL 62
          L H     ++PKG+ AVYVGE  QK++FV+PVTYL+ PC Q LL +A  EF + HPMGGL
Sbjct: 19 LSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGL 78

Query: 63 TFHCKDDIFTDLISQLN 79
          T  C + IF DL S+L+
Sbjct: 79 TIPCTEQIFIDLASRLS 95

BLAST of CaUC02G030590 vs. TAIR 10
Match: AT4G38850.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0

Query: 1  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYH 60
          +G + ++RR  SS P+G+ AVYVGEN  +KK++V+PV+YLNQP  Q LL ++  EF Y H
Sbjct: 8  LGAKQIIRRESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDH 67

Query: 61 PMGGLTFHCKDDIFTDLISQL 78
          PMGGLT  C + +F  + SQ+
Sbjct: 68 PMGGLTIPCHESLFFTVTSQI 88

BLAST of CaUC02G030590 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 88.6 bits (218), Expect = 2.5e-18
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 1  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYY 60
          +G + +L R     S+ PKG+ AVYVGE+QKK++++PV+YLNQP  Q LL ++  EF + 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTFHCKDDIFTDLISQL 78
          HPMGGLT  C +D F ++ S+L
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

BLAST of CaUC02G030590 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 87.8 bits (216), Expect = 4.3e-18
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 1  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYY 60
          +G + +L R     S+ PKG+ AVYVGE+QKK++++P++YLNQP  Q LL ++  EF + 
Sbjct: 8  LGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 67

Query: 61 HPMGGLTFHCKDDIFTDLISQL 78
          HPMGGLT  C +D F ++ S+L
Sbjct: 68 HPMGGLTIPCHEDTFINVTSRL 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8645661.11.0e-2979.49hypothetical protein Csa_020412 [Cucumis sativus][more]
XP_022136192.11.9e-2875.61auxin-responsive protein SAUR24-like [Momordica charantia][more]
KAG6572089.19.0e-2670.45Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_011658582.19.0e-2669.51auxin-responsive protein SAUR24 [Cucumis sativus][more]
KAE8645660.13.4e-2568.75hypothetical protein Csa_020551 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P330818.5e-1958.44Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1[more]
P322957.2e-1863.24Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
Q412202.7e-1750.62Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S... [more]
P330823.6e-1754.55Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1[more]
Q9FK623.6e-1748.78Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0A0K5V12.4e-3276.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1[more]
A0A6J1C4W29.4e-2975.61auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A0A0K4K13.0e-2771.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1[more]
A0A0A0K5U44.4e-2669.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1[more]
A0A5D3CL762.2e-2570.59Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
AT4G38840.11.3e-1961.19SAUR-like auxin-responsive protein family [more]
AT2G21210.18.7e-1954.55SAUR-like auxin-responsive protein family [more]
AT4G38850.11.9e-1850.62SAUR-like auxin-responsive protein family [more]
AT5G18080.12.5e-1848.78SAUR-like auxin-responsive protein family [more]
AT5G18050.14.3e-1847.56SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 9..75
e-value: 6.6E-18
score: 64.7
NoneNo IPR availablePANTHERPTHR31929:SF40SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILYcoord: 9..77
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 9..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G030590.1CaUC02G030590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin