CaUC02G029620 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAAGAAATGATTTGGAGAAATCTAGATTCAAGAGGGTTTGTGTTTTTTGTGGGAGTAGTACTGGCAAGAGGATTTGCTACAGAGATGCTGCCATTGAATTAGCTCAAGAGCTTGTGAGTTCTTTTGTTCTGTTGTTTTTTCTTTTTGGAGTGATATTTCTGTAATTTTTTCTTTTTGAACTTTCAATGTTTTTTATATGTTCCCTTTTGAAGGTTTCAAGAAGATTGGACCTTGTTTATGGTGGTGGGAGTATTGGGCTTATGGGTTTGGTTTCTCAAGCTGTTCATAGAGGTGGAAGAAAAGTTATTGGGTAATTTTATAAACCTTCAACTTTCTCCCAAATTTTGTGTCTTTCCAAAAAAAAAAAAAAAAAACAATTTCATGCCATATTTTTCAATGCTTTTTAGTTTTTACACATAAATATTCCATAATATGATTGTGGGTTTGGTTTGTAGGATAATCCCAAGGACCTTGATGTGCAAAGAGGTAAATTTTTTAGCTTCATTTAATACTTCATAGTTTAATACAAATACATTAAAATTTCGAAAAAAGAAAAGTTTCAAATATAGAAAACCAATGTTCAAGCTTTATTGTCACTACTCCTCCCTTTTATTCTTACGTCTTTATTACTTTTTACTCAATTATAAAAAAAAATTAAAATTTGATGAAAAAATTAAATATTCCTTTTAAAAATGTGAAAACTATATAATGAAATTGGGAAGAACCCGTATAGATTTTCAAAATGAGAAACATTAAACGAAATTATTATCAAATAAAGGGAAAATGTGTTTTGATTAATGATGAATCTGAGTTAATTTGGATTAAAGTTTGGAACTTTTCAATGGATATTTTAATGAGATAAGAAATATATCTTGTAGTTAACCGGTGAAACAGTTGGTGAGGTAAAGCCAGTGGCCGACATGCACGAAAGAAAGGCAGAAATGGCTCGCCATTCTGACTGTTTTATAGCCCTCCCAGGTCATTTTATCATCTCTTCTTTCAATGACACGGCTACGAATGACTGTCTCATAATGTCCGTTATAATAGATGTTTGAAAATCTTAATTTTCTTCAGGAGGCTATGGAACTTTAGAAGAGTTATTGGAAGTTATCACTTGGGCTCAACTTGGCATTCATGATAAGCCAGTTAAGAACAAAACAAACAAAATTCCTCTATTGTTTTTATTTTTTATTTTAATGTGTTTGATTTTTCTTTCTTTCAATTTTTAGGTGGGTTTGCTGAATGTTGATGGTTACTATAACTATCTTTTAACTTTTATTGACAAAGCTGTGGATGATGGGTTCATAAAGCCATCACAAAGAAGCATAATAGTTTCAGCACCAAATGCCAAAGAACTTGTTCAGAAGCTTGAGGTGAAATCATTTTCTCTTTCACCCTTTTTGCAAAAATTACCCCTTTTCTTCTAAATCCTTTTTTTTTTTTTCCTATCTTTTTTTAATTGTTTGTTAGTTTAAGAGAGAAAGTATAAGAGTATTTGATGTTTTCTTTCCTTTTTGATATTGGCTTTGTGTTGTCTAGTTCACTCCAAAAGAACATATTTTGGTAGACTTCTCATTAAAATTTTGAAAAAACTTCTGTCACACCATCCCATTTTCTTGGACCAAAGTTTTTATATTTTTAATGTTTGACTGTCTGCTTAATATCCTTTAGCTATTTGAACGGTAGGGATTAAATTTAGATGTTTAATTAGAAGTTGTTTTGTAACTAATATATGAATCTCAATTTTCAGCAATAGGTATGTTTGCTTTTTTAAGAATAGGTTTAAATCTTTCTATAATTAAAGAAGACAAGTCATTAGTTATTATTTTTAATTTAAAATGTCATATCAATAATTAAAACATTAACAAAGAATTTAAGGACTAAAATATATTTTTGGAATCTCAAAGATCAAAAGTTGAGAACTAGTAGAGAAGAGAAGCGTTATTCATGTCATTTTGCTTCTTTGTTCTCAAAAGTTATTATTGTATTTGTAATTTTTTTTAAAAAATAAATATACAATTAAAAAATATTATTCTTACTTAAAAATATGCTTCAAAAAAAAAAATTGTAAAAATAGTGAACATGTTGACAACTTGACATGCCTTTTTAAATTTAAAATAATAATTAAAAAAGATAATTTTATAGTTATTATTTTTAATTTAAAGTGTCATATCAACAATCAAAATATAAAAATAAAAAAATTTGATGATTAAGATCAAACACATAGATTGTTTAAAACTCAATAACTAAAAAAGAAAAAGGTAATTTTTTTTCTTTTTGTTTTCACGTTATTTTGCTTCAAGAACTAAAAAAAGGTAATTTTTTCTTTTGTATTTCTTTTTAAAGAAATAGAGAATCGTTTGTATTTTCATGTTATTTTTGCTTCTTTATTTACCAGAGTTATTTTTGTATTTGTATTTCTTTCTCTTTTTTTCTTAAAAGAAAAATATCATTCTTACTTAAAAAATGCATAATAAATTTGTATAAATAGTAAACACATCAAAATTTTGTATATATAATTTTAGAAATAGAGAAAAAGAAATTCATAAATAATCTTTAAAATGCAACTCTATTTATTTTAGTTATTGAAAAAGAGCGTAGTCTAAACAAGAAGCGAAACGTGACAAAACTAGGGTTTCGAAAAGTATCTAGACGAAAATGATATTTTTAACTTATATAGTTTGTTTTGATATTTAGAGGTGTGTTTGGATTTGAAGAATAACACTATTCTTGGTTGAGTTAGGAGTATGTACCTGTACATGATGGGGTGATAGGAAAGGCAATGTGGGAAGTTGGGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCCACAAGTGGGGTTCACTGCCGCCACTATGAAGACTCAAATAGCCCTCTAA ATGGAAGCAAGAAATGATTTGGAGAAATCTAGATTCAAGAGGGTTTGTGTTTTTTGTGGGAGTAGTACTGGCAAGAGGATTTGCTACAGAGATGCTGCCATTGAATTAGCTCAAGAGCTTGTTTCAAGAAGATTGGACCTTGTTTATGGTGGTGGGAGTATTGGGCTTATGGGTTTGGTTTCTCAAGCTGTTCATAGAGGTGGAAGAAAAGTTATTGGGATAATCCCAAGGACCTTGATGTGCAAAGAGGGAAAATGTGTTTTGATTAATGATGAATCTGAGTTAATTTGGATTAAACCAGTGGCCGACATGCACGAAAGAAAGGCAGAAATGGCTCGCCATTCTGACTGTTTTATAGCCCTCCCAGGAGGCTATGGAACTTTAGAAGAGTTATTGGAAGTTATCACTTGGGCTCAACTTGGCATTCATGATAAGCCAGTGGGTTTGCTGAATGTTGATGGTTACTATAACTATCTTTTAACTTTTATTGACAAAGCTGTGGATGATGGGTTCATAAAGCCATCACAAAGAAGCATAATAGTTTCAGCACCAAATGCCAAAGAACTTGTTCAGAAGCTTGAGGAGTATGTACCTGTACATGATGGGGTGATAGGAAAGGCAATGTGGGAAGTTGGGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCCACAAGTGGGGTTCACTGCCGCCACTATGAAGACTCAAATAGCCCTCTAA ATGGAAGCAAGAAATGATTTGGAGAAATCTAGATTCAAGAGGGTTTGTGTTTTTTGTGGGAGTAGTACTGGCAAGAGGATTTGCTACAGAGATGCTGCCATTGAATTAGCTCAAGAGCTTGTTTCAAGAAGATTGGACCTTGTTTATGGTGGTGGGAGTATTGGGCTTATGGGTTTGGTTTCTCAAGCTGTTCATAGAGGTGGAAGAAAAGTTATTGGGATAATCCCAAGGACCTTGATGTGCAAAGAGGGAAAATGTGTTTTGATTAATGATGAATCTGAGTTAATTTGGATTAAACCAGTGGCCGACATGCACGAAAGAAAGGCAGAAATGGCTCGCCATTCTGACTGTTTTATAGCCCTCCCAGGAGGCTATGGAACTTTAGAAGAGTTATTGGAAGTTATCACTTGGGCTCAACTTGGCATTCATGATAAGCCAGTGGGTTTGCTGAATGTTGATGGTTACTATAACTATCTTTTAACTTTTATTGACAAAGCTGTGGATGATGGGTTCATAAAGCCATCACAAAGAAGCATAATAGTTTCAGCACCAAATGCCAAAGAACTTGTTCAGAAGCTTGAGGAGTATGTACCTGTACATGATGGGGTGATAGGAAAGGCAATGTGGGAAGTTGGGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCCACAAGTGGGGTTCACTGCCGCCACTATGAAGACTCAAATAGCCCTCTAA MEARNDLEKSRFKRVCVFCGSSTGKRICYRDAAIELAQELVSRRLDLVYGGGSIGLMGLVSQAVHRGGRKVIGIIPRTLMCKEGKCVLINDESELIWIKPVADMHERKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRSIIVSAPNAKELVQKLEEYVPVHDGVIGKAMWEVGQQQQQQQQQQQPQVGFTAATMKTQIAL Homology
BLAST of CaUC02G029620 vs. NCBI nr
Match: XP_038888677.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Benincasa hispida]) HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110 Identity = 211/239 (88.28%), Postives = 217/239 (90.79%), Query Frame = 0
BLAST of CaUC02G029620 vs. NCBI nr
Match: XP_022952638.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita moschata] >KAG6572155.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404.8 bits (1039), Expect = 5.1e-109 Identity = 208/234 (88.89%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CaUC02G029620 vs. NCBI nr
Match: XP_022969318.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita maxima]) HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109 Identity = 208/236 (88.14%), Postives = 215/236 (91.10%), Query Frame = 0
BLAST of CaUC02G029620 vs. NCBI nr
Match: XP_023554615.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108 Identity = 207/235 (88.09%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of CaUC02G029620 vs. NCBI nr
Match: KAG7011800.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105 Identity = 208/252 (82.54%), Postives = 215/252 (85.32%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy Swiss-Prot
Match: Q8LBB7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 7.6e-92 Identity = 179/234 (76.50%), Postives = 196/234 (83.76%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.8e-80 Identity = 147/212 (69.34%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-79 Identity = 144/205 (70.24%), Postives = 170/205 (82.93%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-79 Identity = 145/212 (68.40%), Postives = 171/212 (80.66%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.6e-78 Identity = 144/202 (71.29%), Postives = 166/202 (82.18%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy TrEMBL
Match: A0A6J1GL64 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111455270 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109 Identity = 208/234 (88.89%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy TrEMBL
Match: A0A6J1I0M5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111468361 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109 Identity = 208/236 (88.14%), Postives = 215/236 (91.10%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy TrEMBL
Match: A0A6J1C4Q4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111007899 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 5.3e-104 Identity = 200/242 (82.64%), Postives = 210/242 (86.78%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy TrEMBL
Match: A0A5N6QSG9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Carpinus fangiana OX=176857 GN=FH972_005343 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 2.0e-103 Identity = 196/233 (84.12%), Postives = 207/233 (88.84%), Query Frame = 0
BLAST of CaUC02G029620 vs. ExPASy TrEMBL
Match: A0A0A0K650 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G019910 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.0e-102 Identity = 196/230 (85.22%), Postives = 205/230 (89.13%), Query Frame = 0
BLAST of CaUC02G029620 vs. TAIR 10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 338.2 bits (866), Expect = 5.4e-93 Identity = 179/234 (76.50%), Postives = 196/234 (83.76%), Query Frame = 0
BLAST of CaUC02G029620 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 300.4 bits (768), Expect = 1.3e-81 Identity = 147/212 (69.34%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of CaUC02G029620 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-80 Identity = 144/205 (70.24%), Postives = 170/205 (82.93%), Query Frame = 0
BLAST of CaUC02G029620 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 296.6 bits (758), Expect = 1.8e-80 Identity = 145/212 (68.40%), Postives = 171/212 (80.66%), Query Frame = 0
BLAST of CaUC02G029620 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 293.9 bits (751), Expect = 1.2e-79 Identity = 144/202 (71.29%), Postives = 166/202 (82.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|