CaUC02G028800 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G028800
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transmembrane emp24 domain-containing protein p24beta2-like
Location	Ciama_Chr02: 3012256 .. 3015425 (-)
RNA-Seq Expression	CaUC02G028800
Synteny	CaUC02G028800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAGAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGGTAAGATTCTTTCTTCCCCATTTCACTTGCCTTTGTTTTGCTTTCCTTTTCAGTAATAGAATTTAAAACTGGGCAAGCAAGATTCATGGTTTTTTTTTTTTTTTTCCTTTTTTGGTTGGTGTGTTTCATAATTCTTTGTTAAGAGTCTTTCTTGGTTCTTCATGGTTAGAAGAGGTGGTTAGTTTTTGAGTTGTTTTTACTTTTGAGATGCTTTGGTTTGACTGAGAGAGAGAGAGACCTTCTAATGATAAAAGCTTTTACTTTGTTTTGGGGTGTTAAGAGGACTAATACTAAAACTAGAATGGGCAGGGATCGATTTTGTACAAGAGGGGGTTAGTTTTTAGGTTGTTTCTTAGAACACAAGGACATAATTGTACAACCTATGTACAACCTATAGTCTATAGAACAGATCCTCTTCGAGTAAGGTCGGAGGTTTTAGGTCGTTTCTTGGAGTTCCTTATGATAAAAGTTAGACCTAGTTCTTGGGATGCTGGATGGCTTATACAATATGATGGACAGAGGCTTAAGTATATGAGGTGGTTAGATTTAAGTTATTTTTGTGGAGATGCTTTGATTTGGAGAAAGAGAGAGAGACAGACGACCTCCTAATGATATTTACTTCTTAGTTCTTGGGGTGCTAGTAAAGACTAATGCTAAAACAAGAATGGGCAGAGATTTACCTTAGTAGTGAAGGTGGTTAATTTTTTAAGTTAATTTTGTGGAGATGCTTTGATTTGGAGAGTGACAGAGCCCTATTCTAATAGGAGCCATGTCTTAGTTTTTGAAGTGGTGAGAGGATTATTACTAAAACTAGAATGAGTAGAGACTCATCGTAGTATATGAGGTGGTTGGTTTTTCTTAAGTTAATTTTTGGAGATGCTTTCATTTGTAGTTTGTAGGGAGAGTGACATCCAAATGATACAAATTATGCCTTCAATGTCTTTGCTAAGTAAATAATACTGAAGGGTCTGCAAAAGCTCATTATATTTTATTAGTTCTGTATCACTGAGAATATAAAATTCCAAAAGCTTAAGTAGAATTCCAAAAGCTTCTACTTTGTACTAATGAATCAACTTCACCTCTGAAGGTTCCCAATCTTATTTCTTATTCTACGTCACCCATCAGATAGTATTTGTGATACATTTTTAGGTACCGTTATTGGGGGAAAGAAAGTCCAGCTAGAGATAAACATAAATAACTAGAAAATCTTTTGAGAGACTATAAAATCCATAGGCCTCATTTCATCCTTAGAATCTGTAATCATAGTCCTTTGTGTACTTCATGGTCAAGAAGCCTTTGGACATATGCATTCAAGTTGAGTTGATTATTTTCTAAATGATTTAGAAGTTATGGCTGTGTATAGAGACTCTAGAGACTATATTGGCGAATTTTCTCTTCTTATGGAGTTCTTATTATGGGATTTGATTTGAGACCCTTGTGCTATATTCCTTTGCTGGTAGAATTTGCTGTTAATTCAATATTTTTGTTTGACATCTAGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACGAACAAGTCTCCGTATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCATGAGCAGCATGCAAAAGATGGTAATATGTCATTTCCCTGCTTTATCTTGTGCTGACCTTATTTCATAAGTTAAAATCAATTTCAAAATTGGTGAATATGCCTGCAGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATGTTGACTAACCTGTCTCAAACTCGAATAATTTCCATGACATCAGCTTTGGAATTTAATTTTTTTGTTGAAGTTATTCCTTGATGTCATTGACATCAAGTAACTTCCAAATCTAAAAACATTGTCATTAATTAAGTGAACGCTGCAAAAAGAAGTTTTAGGCATTGTCCAAGCACCAATGATCATGATAGTAGCTTTCTTCTTCATTATTCAAGCACCAATGATCATGTTAGAATTAGGGGCATAATGGCATTTTCCGGAAACTAGACTACTTGCATGTATAAGAGAATGATTTTTGGGGTCCCGTTTGATAACCATTTGACTTTTTGTTTGTGGTTTTTGAAAACTAAGCTTATATACACTACTTCCACTCATAAGTTTCTATGTTATTCACTTTCTACGAATGTATTGAAAAACTAAACCAGAATTTGAAACCTCAAAATAAGTAGTTTTTAAAGTGTGTATTTTTAGAATTTGACTAGTTTTCAAGATTGTCTTCTACAAAATATATATATATAATGTGAAAACCATAATCGAAAATTTGAGAGGAAACAAGCCTAAATTTTAAACTAAAAGCCAAATTGTTACCAAATGGGGCCTTAGGTGTTGTTTGAGACCTTCAAATTAACAAAGGTTGAACAACAGAATGACCTCAAAAGACCTTGGATCTAATCCAACCCAGTTGAGTTGCTCAAATCACATCACGATGATAGCTCCAACCTAACCAAACTTATACGGTTCAGGTTGAGTTGATTGAGTTTGTTTTTCCTTTTGTACACTTTTAGTTTAGTCCATAGCAGATGGTTGCCTTCCATCTAAAAAACCTCCATAATCAGAACTTGGTCAGATTTTCCGTTCAATCTCGATTCTGGTTGTTTAACAGCTCTGCCGAACGAAAACCGGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA

mRNA sequence

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAGAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACGAACAAGTCTCCGTATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCATGAGCAGCATGCAAAAGATGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATCTCTGCCGAACGAAAACCGGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA

Coding sequence (CDS)

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAGAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACGAACAAGTCTCCGTATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCATGAGCAGCATGCAAAAGATGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATCTCTGCCGAACGAAAACCGGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA

Protein sequence

MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGHDVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV

Homology

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BLAST of CaUC02G028800 vs. NCBI nr
Match: XP_038887290.1 (transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida])

HSP 1 Score: 422.9 bits (1086), Expect = 1.8e-114
Identity = 212/234 (90.60%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

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BLAST of CaUC02G028800 vs. NCBI nr
Match: KAA0059209.1 (emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25L/p24 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 417.2 bits (1071), Expect = 9.6e-113
Identity = 208/234 (88.89%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLR+SEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGP+GEHLHDFRDKTSEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

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BLAST of CaUC02G028800 vs. NCBI nr
Match: XP_004144551.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucumis sativus] >KGN43402.1 hypothetical protein Csa_020232 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.4e-111
Identity = 205/234 (87.61%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAFVGVLLL+LR+SEGIRFVIDREECFSH+VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VN+GM KRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNEGMGKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

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BLAST of CaUC02G028800 vs. NCBI nr
Match: XP_023554617.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 3.1e-111
Identity = 204/234 (87.18%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAF GVLLLNLRESEGIRFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRESEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGPSGEHLHDFRDK SEKH+F+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDFRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRA+HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 ----------VNDGMSKRAVHKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

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BLAST of CaUC02G028800 vs. NCBI nr
Match: KAG6572216.1 (Transmembrane emp24 domain-containing protein p24beta2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.0 bits (1055), Expect = 6.9e-111
Identity = 203/234 (86.75%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAF GVLLLNLR+SEGIRFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 445 MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 504

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGPSGEHLHDFRDK SEKH+F+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 505 GWHYGEDGVDLVIKGPSGEHLHDFRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 564

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 565 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 624

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRA+HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 625 ----------VNDGMSKRAVHKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 658

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BLAST of CaUC02G028800 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.7e-84
Identity = 150/217 (69.12%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 18  LLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPS 77
           LL + + + GIRFVIDREECFSH  +YEGDT+HVSFVVIK+DS WH+ +DGVDLVI GP+
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHF 137
           GE +HDFR++ S KHDF+   KG++RFCFTNKSPYHETIDFDV +GHF+Y++QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGHDVFCGMVLIAVNDGMSK 197
            PL++QISKLEEALYNIQFEQHWLEAQTDRQAI                    VN+ MSK
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAI--------------------VNENMSK 191

Query: 198 RAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
           RA+HKA+FES AL+GAS LQVYLL+RLFERKLG SRV
Sbjct: 192 RAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208

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BLAST of CaUC02G028800 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = 0


Query: 11  MMAFVGVLLLN-LRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGV 70
           +   +G++LLN + +   +   ++ EEC    V YEGDTV  +FVV+  D  W     G+
Sbjct: 10  VFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGL 69

Query: 71  DLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHE 130
           D  +  P+G  +   +  + +K +F A   G+++FCF N     ET+ F +HVGH     
Sbjct: 70  DFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEH 129

Query: 131 QHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGHDVFCGMVLI 190
             AKDEH +P+  +I++L EAL ++  EQ +L+A+  R                      
Sbjct: 130 DLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHR-------------------- 189

Query: 191 AVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
             N+   KR I   + E   L  AS LQV  +++LF + +  +RV
Sbjct: 190 HTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

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BLAST of CaUC02G028800 vs. ExPASy TrEMBL
Match: A0A5D3D6W7 (Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00310 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.7e-113
Identity = 208/234 (88.89%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLR+SEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGP+GEHLHDFRDKTSEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CaUC02G028800 vs. ExPASy TrEMBL
Match: A0A0A0K541 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 205/234 (87.61%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAFVGVLLL+LR+SEGIRFVIDREECFSH+VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
           PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VN+GM KRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNEGMGKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CaUC02G028800 vs. ExPASy TrEMBL
Match: A0A6J1GLY5 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111455579 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 202/234 (86.32%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAF GVLLLNLR+SEGIRFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGPSGEHLHD RDK SEKH+F+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRA+HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 ----------VNDGMSKRAVHKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CaUC02G028800 vs. ExPASy TrEMBL
Match: A0A6J1HZG1 (transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=3661 GN=LOC111468315 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110
Identity = 203/234 (86.75%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAF GVLLLNLR+SEG+RFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRRVVMMAFAGVLLLNLRQSEGLRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYGDDGVDLVIKGPSGEHLHDFRDK SEKH+FIAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGDDGVDLVIKGPSGEHLHDFRDKASEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI          
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VNDGMSKRA+HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 ----------VNDGMSKRAVHKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CaUC02G028800 vs. ExPASy TrEMBL
Match: A0A6J1EKQ0 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111435219 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 200/234 (85.47%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLR SEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYGDDGVDLVIKGP+GEHLHD RDKTSEKH+F+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGH 180
           HVGHFSY EQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQ I          
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEI---------- 180

Query: 181 DVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
                     VN+ MSKRA+HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 ----------VNEAMSKRAMHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CaUC02G028800 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 312.0 bits (798), Expect = 4.1e-85
Identity = 150/217 (69.12%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 18  LLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPS 77
           LL + + + GIRFVIDREECFSH  +YEGDT+HVSFVVIK+DS WH+ +DGVDLVI GP+
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHF 137
           GE +HDFR++ S KHDF+   KG++RFCFTNKSPYHETIDFDV +GHF+Y++QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGHDVFCGMVLIAVNDGMSK 197
            PL++QISKLEEALYNIQFEQHWLEAQTDRQAI                    VN+ MSK
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAI--------------------VNENMSK 191

Query: 198 RAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
           RA+HKA+FES AL+GAS LQVYLL+RLFERKLG SRV
Sbjct: 192 RAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208

[Close]

BLAST of CaUC02G028800 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-26
Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = 0


Query: 11  MMAFVGVLLLN-LRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGV 70
           +   +G++LLN + +   +   ++ EEC    V YEGDTV  +FVV+  D  W     G+
Sbjct: 10  VFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGL 69

Query: 71  DLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHE 130
           D  +  P+G  +   +  + +K +F A   G+++FCF N     ET+ F +HVGH     
Sbjct: 70  DFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEH 129

Query: 131 QHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTGHDVFCGMVLI 190
             AKDEH +P+  +I++L EAL ++  EQ +L+A+  R                      
Sbjct: 130 DLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHR-------------------- 189

Query: 191 AVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 235
             N+   KR I   + E   L  AS LQV  +++LF + +  +RV
Sbjct: 190 HTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

The following BLAST results are available for this feature:

BLAST of CaUC02G028800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887290.1	1.8e-114	90.60	transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida]	[more]
KAA0059209.1	9.6e-113	88.89	emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25...	[more]
XP_004144551.1	2.4e-111	87.61	transmembrane emp24 domain-containing protein p24beta2 [Cucumis sativus] >KGN434...	[more]
XP_023554617.1	3.1e-111	87.18	transmembrane emp24 domain-containing protein p24beta2 [Cucurbita pepo subsp. pe...	[more]
KAG6572216.1	6.9e-111	86.75	Transmembrane emp24 domain-containing protein p24beta2, partial [Cucurbita argyr...	[more]

BLAST of CaUC02G028800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7M9	5.7e-84	69.12	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q9LIL4	1.0e-24	30.67	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]

BLAST of CaUC02G028800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D6W7	4.7e-113	88.89	Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K541	1.1e-111	87.61	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 S...	[more]
A0A6J1GLY5	1.7e-110	86.32	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]
A0A6J1HZG1	3.7e-110	86.75	transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EKQ0	3.1e-109	85.47	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]

BLAST of CaUC02G028800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07680.1	4.1e-85	69.12	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G22845.1	7.3e-26	30.67	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 27..226 e-value: 5.5E-33 score: 125.6
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 34..167 e-value: 3.0E-22 score: 79.4
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 35..122 score: 14.582626
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 10..172
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 191..230
None	No IPR available	PANTHER	PTHR22811:SF167	TMP21-RELATED PROTEIN-RELATED	coord: 10..172
None	No IPR available	PANTHER	PTHR22811:SF167	TMP21-RELATED PROTEIN-RELATED	coord: 191..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G028800.1	CaUC02G028800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane