CaUC02G028350 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCGTCGTCGTCCTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCAGTGAGTTTCATTTCCACACCTTTATATTAGATGATACATTGCAATTCTTTAATTTTACACTCATTTAATTACTGTTATACATACGTTGATTCTTTTGATAACATAGTGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATCATGTATGCCTCAACCGCTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGGTGCTGTATTGATGAAGAGCCCCAAGCTATGCCTAACAACTAAAGTACATGTTGTTGCTTCAAATAAAGGGCTTTAATTTCTGTAGTTGATGCTTTGCTACAGTTTGAATGTTTTTAAGTTGATAAATGCATATGTTTTGAGATTAATTAGTATAAGTTAATCTCAGTACCATGACAAGTACATTTCTCCAATGGCTTTTCTGTCAATTGGTTTTCTCATTAATCTATCAAAATCTCCTTACAAGTACTATTTTGTTTGTTTGATTGGAGCTACCCAGTTAAATCTATGTTGATTGAATAAAACAATGTTTTTGGAGTGATCAATGCAACAATTTTCACTTTTTCCAACGTCGGAAAAAGTACTAAAAATGTCGAGAAAAGTTATGTCGACGCATTTTTCTGCATCAGCATAACTGTTGGCGTATCCAAATCGAGAGAAGTACTTCTCGACGAAAAAAATATTTTTATCGATAAAAGTATACTTTTGTCGATGCAATATTGCATTGGCAAATAAACTTACAACGTGCCGCTGCCAGCGTTGTTGGAGAGTGCGGTTGCCGCGTCGGAGGAGCGTGCAGCCGCAAGACCTCCAAGCTTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGAGAGGAAAAGTGGAGTGAGAAAGGAAAATGTGGGGAAAAGAAAAGTTGGGTAAAATTAAAGAAAATTTGATATATAAAAAAATTTTGATTTTTTTATAAAACTTTTGCAATGCGTCAGGATAAGTGTCTAGTTGCGTCGTTATAAATATATAAGAAAAAAACGTTGGTGTTACTTAATTTTGGCCGACAAATTAAAATTACGTTCGGCAATACTAGTCTATGCCGATGAAAATTGATGCATCGGATAAAAAAATATCGTAACAGGTAAAAATTCTTGTAGTGTGATCTTGAAATTTACAAAAGTGATTTTGACCATGTAAATCTAAATTGATTTGAAAGTAGTTAGTTGACAACTGAAAAGCATGTCTATTTTTGTAAAAAAAAAAAAAAAAAATTACGGATACATGAATTTACTTGTTTGATTGGACAAACATCAATGGAGCACACGCATGTGTAGTGAAGTTTTCGTACCACTCTAAATACATTTTAGTTCTTACAAATGTCCATAAAATTATGGTATATATATAAATACATATTGATGTAGCATCTAAATTAAGTAATATTAATTATAAAATTACACTAAACATTTATATAATTTCTTTGAGAAAAACGTTTATCACATTAACCAACCTAAAATATATAAGGAAATAATGAAATTTGAAATATTTATTAAAGCTTCTTAAACTAAAACACAACAAAAATCATTAATTTTCTTTTTAAAAAATTAATAAGGATCAGAAAATTATTTATGTATTTAAATGTGTATTTATATGAGAGAAAAATTAAAAATAGAATTAATGTTTTAAATTTATTTTAAGTGAAAAAAAAAAAAAAACAATATTGATATATGAAATAAAAAAATAAAAAATAAAAAAATAAAAAAACGGAACAAGTATATGTACGTATATACAAAAATTCAATTGAGTGCCTCCCTTGCCCGTGCATCCATCGGCCCCGAACTTTGAATGTTGTTAGGATCAAAACATTGTCAAATTTTGTTTGATGGATGAGGAGATCTCATACTCTTTATAAGAGGCATGGTTTTTATTGTCAATTAGCTTTGAAATGGAATTGTAATATGATATCTAAGTCCCTTAAAAAAAAACCCTAATAAGAACCATATAAACAATATGCTTGCATGTCTCAAATGTCAAGTTTGTTAATATTATCTAAAATATATAACTTCACATTTTGTATGGTCGTGTCACTTGACGCTTTAATTAATGTCAGACATGTTGATTACAAGAATAACATAGTAGAAGAAGCTATGATGAAAACGGGAGCAGAGTTGATGATGTCAATTGTCAAGCATTGCGGTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCGTCGTCGTCCTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATCATGTATGCCTCAACCGCTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGTTGCCGCGTCGGAGGAGCGTGCAGCCGCAAGACCTCCAAGCTTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGAGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCGTCGTCGTCCTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATCATGTATGCCTCAACCGCTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGTTGCCGCGTCGGAGGAGCGTGCAGCCGCAAGACCTCCAAGCTTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGAGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRKTSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN Homology
BLAST of CaUC02G028350 vs. NCBI nr
Match: XP_038888333.1 (glycine-rich protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20 Identity = 77/167 (46.11%), Postives = 85/167 (50.90%), Query Frame = 0
BLAST of CaUC02G028350 vs. NCBI nr
Match: XP_038888334.1 (glycine-rich protein-like isoform X2 [Benincasa hispida]) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-20 Identity = 77/167 (46.11%), Postives = 84/167 (50.30%), Query Frame = 0
BLAST of CaUC02G028350 vs. NCBI nr
Match: XP_004144531.1 (glycine-rich protein [Cucumis sativus] >KGN43452.1 hypothetical protein Csa_020301 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 3.6e-13 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of CaUC02G028350 vs. NCBI nr
Match: XP_038888674.1 (glycine-rich protein-like [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 7.1e-09 Identity = 64/163 (39.26%), Postives = 70/163 (42.94%), Query Frame = 0
BLAST of CaUC02G028350 vs. NCBI nr
Match: KAE8645721.1 (hypothetical protein Csa_020383 [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 2.3e-07 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CaUC02G028350 vs. ExPASy TrEMBL
Match: A0A0A0K5A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037560 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-13 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of CaUC02G028350 vs. ExPASy TrEMBL
Match: A0A6J1JMI7 (glycine-rich protein DC7.1-like OS=Cucurbita maxima OX=3661 GN=LOC111486537 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06 Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CaUC02G028350 vs. ExPASy TrEMBL
Match: A0A6J1C3T3 (glycine-rich protein 3 short isoform-like OS=Momordica charantia OX=3673 GN=LOC111007996 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 62/168 (36.90%), Postives = 76/168 (45.24%), Query Frame = 0
BLAST of CaUC02G028350 vs. ExPASy TrEMBL
Match: A0A6J1ESD5 (glycine-rich protein DC7.1-like OS=Cucurbita moschata OX=3662 GN=LOC111437131 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CaUC02G028350 vs. ExPASy TrEMBL
Match: A0A6J1C3E0 (glycine-rich protein DC7.1-like OS=Momordica charantia OX=3673 GN=LOC111007997 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04 Identity = 41/77 (53.25%), Postives = 48/77 (62.34%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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