CaUC02G028220 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G028220
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein E6-like
Location	Ciama_Chr02: 2556130 .. 2556879 (+)
RNA-Seq Expression	CaUC02G028220
Synteny	CaUC02G028220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTCCACTACTTTCAACTATCTCCCATTCTTCTTCTTCTTCCTCCTCCTTCTATCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGCAAATTCATCAACACTGATCGCGACCTTGTTCCTAATCTTCCTCCCGCGCCGGTCTCTGCTCCGCCTCAGATATCTCCATCTCTGCCACCGACGCCGGCTCCCGCCCCCTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGCCCGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCGGGAGACGGACAGGAAGAGGAGAATCACAAATCTGGCTATTCCACGACGAATTTACAGACGGAGAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAGAACAATAACTACCAGAACAACAATGGATTTAGAAATTCCGAGTATGAGAACAACAACGAGTACAGAAAGTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACGAGTACCAGAGCAACTTTGAGGACGACGGCTACAGAAGGAGGCGATACAACCCAACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGGTACTTTCATGATATTGACTCCAAGAATGGAGAAGAAAATGAATCGTACGGAAGCAAGAAGTATCCGAAATACGAGTTCGATTCAATGGAGGAGTACGAGAAGAGTGAGGGATTGCTTCCTTGA

mRNA sequence

ATGGCCGCTTCCACTACTTTCAACTATCTCCCATTCTTCTTCTTCTTCCTCCTCCTTCTATCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGCAAATTCATCAACACTGATCGCGACCTTGTTCCTAATCTTCCTCCCGCGCCGGTCTCTGCTCCGCCTCAGATATCTCCATCTCTGCCACCGACGCCGGCTCCCGCCCCCTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGCCCGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCGGGAGACGGACAGGAAGAGGAGAATCACAAATCTGGCTATTCCACGACGAATTTACAGACGGAGAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAGAACAATAACTACCAGAACAACAATGGATTTAGAAATTCCGAGTATGAGAACAACAACGAGTACAGAAAGTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACGAGTACCAGAGCAACTTTGAGGACGACGGCTACAGAAGGAGGCGATACAACCCAACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGGTACTTTCATGATATTGACTCCAAGAATGGAGAAGAAAATGAATCGTACGGAAGCAAGAAGTATCCGAAATACGAGTTCGATTCAATGGAGGAGTACGAGAAGAGTGAGGGATTGCTTCCTTGA

Coding sequence (CDS)

ATGGCCGCTTCCACTACTTTCAACTATCTCCCATTCTTCTTCTTCTTCCTCCTCCTTCTATCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGCAAATTCATCAACACTGATCGCGACCTTGTTCCTAATCTTCCTCCCGCGCCGGTCTCTGCTCCGCCTCAGATATCTCCATCTCTGCCACCGACGCCGGCTCCCGCCCCCTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGCCCGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCGGGAGACGGACAGGAAGAGGAGAATCACAAATCTGGCTATTCCACGACGAATTTACAGACGGAGAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAGAACAATAACTACCAGAACAACAATGGATTTAGAAATTCCGAGTATGAGAACAACAACGAGTACAGAAAGTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACGAGTACCAGAGCAACTTTGAGGACGACGGCTACAGAAGGAGGCGATACAACCCAACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGGTACTTTCATGATATTGACTCCAAGAATGGAGAAGAAAATGAATCGTACGGAAGCAAGAAGTATCCGAAATACGAGTTCGATTCAATGGAGGAGTACGAGAAGAGTGAGGGATTGCTTCCTTGA

Protein sequence

MAASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPNLPPAPVSAPPQISPSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDGQEEENHKSGYSTTNLQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEYQSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGSKKYPKYEFDSMEEYEKSEGLLP

Homology

[Close]

BLAST of CaUC02G028220 vs. NCBI nr
Match: XP_038886989.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 9.0e-101
Identity = 206/251 (82.07%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVP-NLPPAPVSAPPQISP 61
           AASTTFN L FFFFF+LLLSSVQIEARVNKFFSKFINTDR++VP  LPPAPVSAPP+ISP
Sbjct: 3   AASTTFNLLSFFFFFILLLSSVQIEARVNKFFSKFINTDREVVPTKLPPAPVSAPPEISP 62

Query: 62  SLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG--QEEENHKSGYS 121
           SL PTPAPAPFFDESQNAYGLY RD+DADENTRTITDVEEEILAGDG  ++E+NHK+ Y 
Sbjct: 63  SLAPTPAPAPFFDESQNAYGLYGRDADADENTRTITDVEEEILAGDGEDEDEDNHKAAYP 122

Query: 122 TTNLQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEYQ 181
            TN QT N         Y NNNY+NNNGFRNSEYEN+NEYR SEYES FENNNARNY+YQ
Sbjct: 123 MTNSQTGN---------YGNNNYENNNGFRNSEYENHNEYRNSEYESAFENNNARNYQYQ 182

Query: 182 SNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGSKKYPKYEFDSM 241
           SNFEDDGYRRRR+ PT+QQGMSDTRFMENGRYFHDI+SKNGEEN SYG+ KYPKYEFDSM
Sbjct: 183 SNFEDDGYRRRRHEPTRQQGMSDTRFMENGRYFHDINSKNGEENGSYGNNKYPKYEFDSM 242

Query: 242 EEYEKSEGLLP 250
           EEYE+SEGLLP
Sbjct: 243 EEYERSEGLLP 244

[Close]

BLAST of CaUC02G028220 vs. NCBI nr
Match: XP_011659700.1 (protein E6 [Cucumis sativus] >KGN43470.1 hypothetical protein Csa_020541 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-82
Identity = 184/256 (71.88%), Postives = 209/256 (81.64%), Query Frame = 0


Query: 2   AASTTFNY----LPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPN-LPPAPVSAPP 61
           +AS TF +      FFFFFLLL+SSVQIEARVNKFFSKFI+TD ++VPN L PAP+S PP
Sbjct: 5   SASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPLSVPP 64

Query: 62  QISPSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKS 121
           + SPSL PTPAPAPFFDESQNAYGLY  D DADENTRTITDVEEEIL G+G Q+E N KS
Sbjct: 65  ETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEGNDKS 124

Query: 122 GYSTTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARN 181
           G+   N ++T N E     E+YQN NY+NNNGFRNSEY+N NEYR SEYE++  NN  RN
Sbjct: 125 GFPMNNFVETRNEE-----EQYQNKNYENNNGFRNSEYDNRNEYRNSEYENN--NNEGRN 184

Query: 182 YEYQSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKY 241
           YE Q NFE+ GYRR R+ PT+Q+GMSDTRFMENGRYFHDI+S+N EEN SYGS KKYPKY
Sbjct: 185 YEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKY 244

Query: 242 EFDSMEEYEKSEGLLP 250
           EFDSMEEYE+SEGLLP
Sbjct: 245 EFDSMEEYERSEGLLP 253

[Close]

BLAST of CaUC02G028220 vs. NCBI nr
Match: XP_022969172.1 (probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-82
Identity = 190/283 (67.14%), Postives = 217/283 (76.68%), Query Frame = 0


Query: 1   MAASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPNLP----PAPVSAPP 60
           MAAS TF +LPF F   LLLSSVQIEARVNKFFSKFI+ DRD+V  LP    PAPVS PP
Sbjct: 3   MAASITFKHLPFIF---LLLSSVQIEARVNKFFSKFIHADRDVV--LPVAFSPAPVSVPP 62

Query: 61  QISPSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDGQEEENHKSG 120
           +ISPSL PTPAPAPFFDESQNAYGLY  D+D  E++RTITDVEEEILA DG++++ HKSG
Sbjct: 63  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 122

Query: 121 YSTTNLQTENYESPRRYE-----------------------EYQNNN------YQNNNGF 180
           Y  TNL T+N+ESP+RYE                       EY+NNN      Y+NNN +
Sbjct: 123 YQ-TNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 182

Query: 181 RNSEYE-NNNEYRKSEYESDFENNNARNYEYQSNFEDDGYRRRRYNPTQQQGMSDTRFME 240
           RNSEYE NNNEYR +EY+SDFEN+  RNY+YQSN E DGYR+RRY PT+QQGMSDTRFME
Sbjct: 183 RNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFME 242

Query: 241 NGRYFHDIDSKNGEENESYGSKKYPKYEFDSMEEYEKSEGLLP 250
           NGRY+H+I+S  GEEN+SYGSKKYP  EFDSMEEYEKSEG LP
Sbjct: 243 NGRYYHEINSGIGEENKSYGSKKYPN-EFDSMEEYEKSEGFLP 278

[Close]

BLAST of CaUC02G028220 vs. NCBI nr
Match: XP_008455495.1 (PREDICTED: protein E6-like [Cucumis melo] >TYK21625.1 protein E6-like [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 185/253 (73.12%), Postives = 207/253 (81.82%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTD-RDLVPN-LPPAPVSAPPQIS 61
           +ASTTFN+    FFFLLLLSSVQ EARVNKFFSKFI+TD  ++VPN L PAP+S PP+ S
Sbjct: 5   SASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPETS 64

Query: 62  PSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKSGYS 121
           PSL PTPAPAPFFDESQNAYGLY  D D DEN RTITDVEEEIL G+G Q+E N KS + 
Sbjct: 65  PSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSEFP 124

Query: 122 TTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEY 181
             N +QT + E     E+YQN NY+ NNGFRNSEYEN+NEYR SEYE++  NN  RNY+Y
Sbjct: 125 MNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNYQY 184

Query: 182 QSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKYEFD 241
           QSNFED GYRR R+ PT+QQGMSDTRFMENGRYFHDI+SKN EEN SYGS KKYPKYEFD
Sbjct: 185 QSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEFD 244

Query: 242 SMEEYEKSEGLLP 250
           SMEEYE+SEGLLP
Sbjct: 245 SMEEYERSEGLLP 250

[Close]

BLAST of CaUC02G028220 vs. NCBI nr
Match: KAA0059120.1 (protein E6-like [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 7.9e-81
Identity = 183/253 (72.33%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPN--LPPAPVSAPPQIS 61
           +ASTTFN+    FFFLLLLSSVQ EARVNKFFSKFI+TD + V +  L PAP+S PP+ S
Sbjct: 5   SASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVSNTLSPAPLSVPPETS 64

Query: 62  PSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKSGYS 121
           PSL PTPAPAPFFDESQNAYGLY  D D DEN RTITDVEEEIL G+G Q+E N KS + 
Sbjct: 65  PSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSEFP 124

Query: 122 TTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEY 181
             N +QT + E     E+YQN NY+ NNGFRNSEYEN+NEYR SEYE++  NN  RNY+Y
Sbjct: 125 MNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNYQY 184

Query: 182 QSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKYEFD 241
           QSNFED GYRR R+ PT+QQGMSDTRFMENGRYFHDI+SKN EEN SYGS KKYPKYEFD
Sbjct: 185 QSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEFD 244

Query: 242 SMEEYEKSEGLLP 250
           SMEEYE+SEGLLP
Sbjct: 245 SMEEYERSEGLLP 250

[Close]

BLAST of CaUC02G028220 vs. ExPASy TrEMBL
Match: A0A6J1HVL6 (probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.0e-83
Identity = 190/283 (67.14%), Postives = 217/283 (76.68%), Query Frame = 0


Query: 1   MAASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPNLP----PAPVSAPP 60
           MAAS TF +LPF F   LLLSSVQIEARVNKFFSKFI+ DRD+V  LP    PAPVS PP
Sbjct: 3   MAASITFKHLPFIF---LLLSSVQIEARVNKFFSKFIHADRDVV--LPVAFSPAPVSVPP 62

Query: 61  QISPSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDGQEEENHKSG 120
           +ISPSL PTPAPAPFFDESQNAYGLY  D+D  E++RTITDVEEEILA DG++++ HKSG
Sbjct: 63  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 122

Query: 121 YSTTNLQTENYESPRRYE-----------------------EYQNNN------YQNNNGF 180
           Y  TNL T+N+ESP+RYE                       EY+NNN      Y+NNN +
Sbjct: 123 YQ-TNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 182

Query: 181 RNSEYE-NNNEYRKSEYESDFENNNARNYEYQSNFEDDGYRRRRYNPTQQQGMSDTRFME 240
           RNSEYE NNNEYR +EY+SDFEN+  RNY+YQSN E DGYR+RRY PT+QQGMSDTRFME
Sbjct: 183 RNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFME 242

Query: 241 NGRYFHDIDSKNGEENESYGSKKYPKYEFDSMEEYEKSEGLLP 250
           NGRY+H+I+S  GEEN+SYGSKKYP  EFDSMEEYEKSEG LP
Sbjct: 243 NGRYYHEINSGIGEENKSYGSKKYPN-EFDSMEEYEKSEGFLP 278

[Close]

BLAST of CaUC02G028220 vs. ExPASy TrEMBL
Match: A0A0A0K1D4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038700 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.0e-83
Identity = 184/256 (71.88%), Postives = 209/256 (81.64%), Query Frame = 0


Query: 2   AASTTFNY----LPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPN-LPPAPVSAPP 61
           +AS TF +      FFFFFLLL+SSVQIEARVNKFFSKFI+TD ++VPN L PAP+S PP
Sbjct: 5   SASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPLSVPP 64

Query: 62  QISPSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKS 121
           + SPSL PTPAPAPFFDESQNAYGLY  D DADENTRTITDVEEEIL G+G Q+E N KS
Sbjct: 65  ETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEGNDKS 124

Query: 122 GYSTTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARN 181
           G+   N ++T N E     E+YQN NY+NNNGFRNSEY+N NEYR SEYE++  NN  RN
Sbjct: 125 GFPMNNFVETRNEE-----EQYQNKNYENNNGFRNSEYDNRNEYRNSEYENN--NNEGRN 184

Query: 182 YEYQSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKY 241
           YE Q NFE+ GYRR R+ PT+Q+GMSDTRFMENGRYFHDI+S+N EEN SYGS KKYPKY
Sbjct: 185 YEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKY 244

Query: 242 EFDSMEEYEKSEGLLP 250
           EFDSMEEYE+SEGLLP
Sbjct: 245 EFDSMEEYERSEGLLP 253

[Close]

BLAST of CaUC02G028220 vs. ExPASy TrEMBL
Match: A0A5D3DDN1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00230 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 185/253 (73.12%), Postives = 207/253 (81.82%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTD-RDLVPN-LPPAPVSAPPQIS 61
           +ASTTFN+    FFFLLLLSSVQ EARVNKFFSKFI+TD  ++VPN L PAP+S PP+ S
Sbjct: 5   SASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPETS 64

Query: 62  PSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKSGYS 121
           PSL PTPAPAPFFDESQNAYGLY  D D DEN RTITDVEEEIL G+G Q+E N KS + 
Sbjct: 65  PSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSEFP 124

Query: 122 TTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEY 181
             N +QT + E     E+YQN NY+ NNGFRNSEYEN+NEYR SEYE++  NN  RNY+Y
Sbjct: 125 MNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNYQY 184

Query: 182 QSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKYEFD 241
           QSNFED GYRR R+ PT+QQGMSDTRFMENGRYFHDI+SKN EEN SYGS KKYPKYEFD
Sbjct: 185 QSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEFD 244

Query: 242 SMEEYEKSEGLLP 250
           SMEEYE+SEGLLP
Sbjct: 245 SMEEYERSEGLLP 250

[Close]

BLAST of CaUC02G028220 vs. ExPASy TrEMBL
Match: A0A1S3C0L5 (protein E6-like OS=Cucumis melo OX=3656 GN=LOC103495646 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 185/253 (73.12%), Postives = 207/253 (81.82%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTD-RDLVPN-LPPAPVSAPPQIS 61
           +ASTTFN+    FFFLLLLSSVQ EARVNKFFSKFI+TD  ++VPN L PAP+S PP+ S
Sbjct: 5   SASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPETS 64

Query: 62  PSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKSGYS 121
           PSL PTPAPAPFFDESQNAYGLY  D D DEN RTITDVEEEIL G+G Q+E N KS + 
Sbjct: 65  PSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSEFP 124

Query: 122 TTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEY 181
             N +QT + E     E+YQN NY+ NNGFRNSEYEN+NEYR SEYE++  NN  RNY+Y
Sbjct: 125 MNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNYQY 184

Query: 182 QSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKYEFD 241
           QSNFED GYRR R+ PT+QQGMSDTRFMENGRYFHDI+SKN EEN SYGS KKYPKYEFD
Sbjct: 185 QSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEFD 244

Query: 242 SMEEYEKSEGLLP 250
           SMEEYE+SEGLLP
Sbjct: 245 SMEEYERSEGLLP 250

[Close]

BLAST of CaUC02G028220 vs. ExPASy TrEMBL
Match: A0A5A7UVJ1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00270 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 183/253 (72.33%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 2   AASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKFINTDRDLVPN--LPPAPVSAPPQIS 61
           +ASTTFN+    FFFLLLLSSVQ EARVNKFFSKFI+TD + V +  L PAP+S PP+ S
Sbjct: 5   SASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVSNTLSPAPLSVPPETS 64

Query: 62  PSLPPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDG-QEEENHKSGYS 121
           PSL PTPAPAPFFDESQNAYGLY  D D DEN RTITDVEEEIL G+G Q+E N KS + 
Sbjct: 65  PSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSEFP 124

Query: 122 TTN-LQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARNYEY 181
             N +QT + E     E+YQN NY+ NNGFRNSEYEN+NEYR SEYE++  NN  RNY+Y
Sbjct: 125 MNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNYQY 184

Query: 182 QSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGS-KKYPKYEFD 241
           QSNFED GYRR R+ PT+QQGMSDTRFMENGRYFHDI+SKN EEN SYGS KKYPKYEFD
Sbjct: 185 QSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEFD 244

Query: 242 SMEEYEKSEGLLP 250
           SMEEYE+SEGLLP
Sbjct: 245 SMEEYERSEGLLP 250

[Close]

BLAST of CaUC02G028220 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-06
Identity = 83/282 (29.43%), Postives = 125/282 (44.33%), Query Frame = 0


Query: 1   MAASTTFNYLPFFFFFLLLLSSVQIEARVNKFFSKF-INTDRDLVPN-LPPAPVSAPPQI 60
           MA ST  + L  FFF  L+L S QI AR + FF KF   + +D  PN   P   S    +
Sbjct: 1   MAFSTRGSLL--FFFTTLVLLSTQIHARDSYFFGKFHRESPKDQNPNSFIPLETSEKTTV 60

Query: 61  SPSL---PPTPAPAPFFDESQNAYGLYARDSDADENTRTITDVEEEILAGDGQEEENHKS 120
             S+           F  ES N YGLY  ++  + N     D +EE    +  +E+ +  
Sbjct: 61  EESVLNKKEQEQDPTFVPESGNGYGLYGHETTYNNN----NDNKEEFNNNNKNDEKVNSK 120

Query: 121 GYSTTNLQTENYESPRRYEE-------------YQNNNYQNNNGFRNSEYE---NNNEYR 180
            +ST +L +E  ES   YEE             Y N  + NNN   ++ ++   NNN+Y 
Sbjct: 121 TFSTPSL-SETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYD 180

Query: 181 KSEYESDFENNNAR---NYEYQSNFEDDGY-------RRRRYNPT--------------- 233
           ++  + +F NNN     NY+Y  N +++ +       ++  YN                 
Sbjct: 181 ENYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGTELERETPYKGY 240

[Close]

BLAST of CaUC02G028220 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 0


Query: 12  FFFFFLLLLSSVQIEARVNKFFSKFINTD-RDLVPNLPPAPVSAPPQISPSLPPTPAPAP 71
           FFF   L+L S QI AR +  F KF   D ++  PN        P + +    P      
Sbjct: 10  FFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNPN-----NLVPIETNEKKEPDDQNPA 69

Query: 72  FFDESQNAYGLYARDSDADENTRTITDVEEEILAGDGQEEENHKSGYSTTNLQ--TENYE 131
           F  +S+N YGLY  ++  + N        EE+     ++  N+   +ST +L    +  E
Sbjct: 70  FIPQSENGYGLYGHETTDNNN--------EELNNNKYEDNVNYDDSFSTPSLSETAQTQE 129

Query: 132 SPRRYEE-YQNNNYQNNNGFRNSEYENNNEYRKSEYESD-------FENNNARNYEYQSN 191
           S + Y+E Y       +N    S YEN+N Y   + ++D       + N +   YE  + 
Sbjct: 130 SYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPYKGYSNKDTSYYENPNT 189

Query: 192 F-----EDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDID 216
           +     E +   R   N  ++QGMSDTR+M NG+Y++D+D
Sbjct: 190 YGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKYYYDLD 216

[Close]

BLAST of CaUC02G028220 vs. TAIR 10
Match: AT1G03820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-05
Identity = 77/254 (30.31%), Postives = 107/254 (42.13%), Query Frame = 0


Query: 6   TFNYLPFFFFFLLLLSSV-QIEARVNK-FFSKFINTDRDLVPNLPPAPVSAPPQISPSLP 65
           +F   P F F  +    V  +EAR  K FFSKF + DR   PN     +S          
Sbjct: 3   SFALKPIFCFIAVFCFIVHNVEAREGKLFFSKFTHIDR---PNNKDVALS---------- 62

Query: 66  PTPAPAPFFDESQN---------AYGLYARDSDADENTRTITDVEEEILAGDGQEEENHK 125
             PAPAP   ++             G+  +  ++  ++ T TD E E L     EE+N K
Sbjct: 63  --PAPAPGLAQANGRLGNGSFGPGSGMIPQTKESWPSSSTTTDEEFEKLMATFDEEKNTK 122

Query: 126 SGYSTTNLQTENYESPRRYEEYQNNNYQNNNGFRNSEYENNNEYRKSEYESDFENNNARN 185
                          P  +EE + +    +      +Y NNN            NNN   
Sbjct: 123 --------------LPEAFEEEEESEDSEDLNEPKDKYNNNN------------NNNGYT 182

Query: 186 YEYQSNFEDDGYRRRRYNPTQQQGMSDTRFMENGRYFHDIDSKNGEENESYGSKKY---- 245
           Y   +N+ D+G  R   N  ++QGMSDTR MENG+YF+D   +N E   S G +      
Sbjct: 183 YT-TNNYNDNG--RGYGNEEEKQGMSDTRVMENGKYFYDTRGRNSENTPSRGYENARGND 212

The following BLAST results are available for this feature:

BLAST of CaUC02G028220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886989.1	9.0e-101	82.07	protein E6-like [Benincasa hispida]	[more]
XP_011659700.1	1.4e-82	71.88	protein E6 [Cucumis sativus] >KGN43470.1 hypothetical protein Csa_020541 [Cucumi...	[more]
XP_022969172.1	1.4e-82	67.14	probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima]	[more]
XP_008455495.1	1.2e-81	73.12	PREDICTED: protein E6-like [Cucumis melo] >TYK21625.1 protein E6-like [Cucumis m...	[more]
KAA0059120.1	7.9e-81	72.33	protein E6-like [Cucumis melo var. makuwa]	[more]

BLAST of CaUC02G028220 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G028220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVL6	7.0e-83	67.14	probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A0A0K1D4	7.0e-83	71.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038700 PE=4 SV=1	[more]
A0A5D3DDN1	5.9e-82	73.12	Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G0023...	[more]
A0A1S3C0L5	5.9e-82	73.12	protein E6-like OS=Cucumis melo OX=3656 GN=LOC103495646 PE=4 SV=1	[more]
A0A5A7UVJ1	3.8e-81	72.33	Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0027...	[more]

BLAST of CaUC02G028220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28400.1	3.1e-06	29.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G33850.1	1.5e-05	29.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G03820.1	7.6e-05	30.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..249
None	No IPR available	PANTHER	PTHR35274:SF5	BNAC05G02100D PROTEIN	coord: 1..244
IPR040290	Protein E6-like	PANTHER	PTHR35274	E6-LIKE PROTEIN	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G028220.1	CaUC02G028220.1	mRNA