CaUC02G027970 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G027970
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCoiled-coil domain-containing protein 21, putative isoform 2
LocationCiama_Chr02: 2310267 .. 2312471 (+)
RNA-Seq ExpressionCaUC02G027970
SyntenyCaUC02G027970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGAATTCTAACAAATTGGAGTAAGCAAGAGGGAGAAGGAGAACGATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCGGAGGTCTTAAGGCACTCTTTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGGTTCATTTTCACCCACAATTTGATTCAATTTTCCCTTTGATTTGTTTTGGTTGTCATGAAAATGCAGAATTTCGAAATGGAACTTCCAATTCTTTTCCTGTTTGTGTTTCTTAATACCTATGCCTAATTGGGTTTTAGTTCGATGAACTAGATTTTGATAATCATCCTTATTGGACGTGGTTTGATTTTCTTCTTCTTTGTTCATTTCTATGTGATACTGTCTGTGGTGCATAGTCTGTACTCGAAGTTGGTTGTTCTAATACTTTTTTCTTTGTAAATTAGCTTTGGGACAATGGGAAAATTTTCCTTTCTGGGTGACACAGTACAGGCATGTGCCTTTAACTGAAGAAACAGTAGTTGGTAGTGATTGTTGGATCAAGATGTCAATCCTATAATGATTCTTATGCACTTGGAAAGTAAATAGTATACATGAAGTTGAAAATTTTTTATTTGCTGCTCAAAAAGTTGCTGGGACATGTGCTTTTGTAACAGTTTGTATCACTTGATGTTGGGAGCGGTGGAATACAACTAAGTACAACACGCCCTTGTATCTAAAGAGTTCTATAACTGCCTTTTGAAGTTTCCCAGCAAACAAAATAACTATCTTTTTCTCTCATCTTCAACAGTTTGTGCCATATCTTGTAATTCTTTTTTTGTTTTTGGTTTTGTGTTGGCTTCTGTTGGGTTGAAGTTGTTCTGCTTGTCCTTTTTCTGTCTTGCCATTCGTATTCTTTCATTTTCTCTAGAAAGTTCAGTTTCTCATGAAAAAATTTAAGTTGAATGCAGGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCTGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGGTAACCTTTAAAAGGAAAAACTTACCTCTTTCTCCCTCATCCTAATCATTAGACCTTTGGTTTTCATGCAGTTGGAAAGGCATTTGCTGTGGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGATTCACCATCTCCAAACTAGATATCAACAATGTAAACATGGATTGGATTTCTTAACTTTTTGGTGGTCTTTGTATATGCACATACATTTCCATTTAACTCAGATCATGGCAACTTCATTTTTTGACAGGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGTATGTTGTTATCATTTAAATGATTCTCACAGCATTCACCTGTTACTGGATCTTACTTTTGCCAGTTCTTTATCTAACCAAGGGTGTTTTTTTTTTTTTTTCCTCCCGAGTTTTAGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAAACTGCACAAATTTTTTGACATTTTGTTGTTTATCTTGTGTATGTAAAAAATAGAATATCATATTCCCATCTTCACAGATGGAGTGTAGAATGTTACTGGTTGCTAGCTAAGTAATACATAAGTTCAATGTTGATATTATGCCCGAGGCAGAAAATATAGAGCTGTCCAACTTCCTGTTTCTTTCTCAAACTTGTTTTTCATAGCTTGTAATCTAAACCAGCGCCATACTTCCAGGCCTCAAGTCGTCTTTTCCACTCGAAATTCATCTTTGGTGTTAGTGAACTTAGGAATGACCTTGAAAAATACACAATTTGGTAAAAAT

mRNA sequence

CTGAATTCTAACAAATTGGAGTAAGCAAGAGGGAGAAGGAGAACGATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCGGAGGTCTTAAGGCACTCTTTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGAATTTCGAAATGGAACTTCCAATTCTTTTCCTGTTTGTGTTTCTTAATACCTATGCCTAATTGGTTCGATGAACTAGATTTTGATAATCATCCTTATTGGACGTGGTTTGATTTTCTTCTTCTTTGTTCATTTCTATGTGATACTGTCTGTGCTTTGGGACAATGGGAAAATTTTCCTTTCTGGGTGACACAGTACAGGCATGTGCCTTTAACTGAAGAAACAGTAGTTGGTAGTGATTGTTGGATCAAGATTTGCTGGGACATGTGCTTTTGTAACAGTTTGTATCACTTGATGTTGGGAGCGTTTCCCAGCAAACAAAATAACTATCTTTTTCTCTCATCTTCAACAGTTTGTGCCATATCTTGTAATTCTTTTTTTGTTTTTGGTTTTGTGTTGGCTTCTGTTGGGTTGAAGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCTGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGTTGGAAAGGCATTTGCTGTGGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGATTCACCATCTCCAAACTAGATATCAACAATGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAAACTGCACAAATTTTTTGACATTTTGTTGTTTATCTTGTGTATGTAAAAAATAGAATATCATATTCCCATCTTCACAGATGGAGTGTAGAATGTTACTGGTTGCTAGCTAAGTAATACATAAGTTCAATGTTGATATTATGCCCGAGGCAGAAAATATAGAGCTGTCCAACTTCCTGTTTCTTTCTCAAACTTGTTTTTCATAGCTTGTAATCTAAACCAGCGCCATACTTCCAGGCCTCAAGTCGTCTTTTCCACTCGAAATTCATCTTTGGTGTTAGTGAACTTAGGAATGACCTTGAAAAATACACAATTTGGTAAAAAT

Coding sequence (CDS)

ATGAGTTTTTTGGCCGGAAGATTGGCCGGCAAAGAGGCGGCATATTTTATTCAGGAATCCAAACACGCCGTCGGCCGGCTTGCCCAGAAAAACACCACCCAGAAATTCCCGGCGCAATCACCGCCTTCTTCCCATTCTCCGGCGGACGGTGAATCGCAAGCCGACATTCTTCCGGAGGTCTTAAGGCACTCTTTGCCCTCTAAATTCTTCAGGGAGGAATCTGCAGGCTCCAACGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTCTCGTTAGATGCTCTCAACCCTCTTAGGGGTTTCCTCTCCCTTCCTCAGGTTACATTCGGCCCCAAAAGAATTTCGAAATGGAACTTCCAATTCTTTTCCTGTTTGTGTTTCTTAATACCTATGCCTAATTGGTTCGATGAACTAGATTTTGATAATCATCCTTATTGGACGTGGTTTGATTTTCTTCTTCTTTGTTCATTTCTATGTGATACTGTCTGTGCTTTGGGACAATGGGAAAATTTTCCTTTCTGGGTGACACAGTACAGGCATGTGCCTTTAACTGAAGAAACAGTAGTTGGTAGTGATTGTTGGATCAAGATTTGCTGGGACATGTGCTTTTGTAACAGTTTGTATCACTTGATGTTGGGAGCGTTTCCCAGCAAACAAAATAACTATCTTTTTCTCTCATCTTCAACAGTTTGTGCCATATCTTGTAATTCTTTTTTTGTTTTTGGTTTTGTGTTGGCTTCTGTTGGGTTGAAGTGGGAATTGCCTCAATCTGAAAACTCAGTACTAGCCTCAACTGCTAACGATTTGCGGACCGACAAGCATACTCCTATTAATCCTGAGAAGTTGAAGGCTGCTGCTGAAGGCCTTGCACATGTTGGAAAGGCATTTGCTGTGGCTACTGCGCTTGTCTTTGGTGGTGCCACCTTGATCTTTGGATTCACCATCTCCAAACTAGATATCAACAATGCAAGTGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAAGATGGAAATGATCAGAGAGCAACTTGTTCCCTTCAAAGTCTGGGCTAATGATGTGTCAAAAAAATGGCATGTGGAAAGAGATGAAGATATCAAAGAGAAGCCTCTGATAAAGGAACTCTCAAAGATTTTGGGTGCCAAGACTCCCAACTAA

Protein sequence

MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEVLRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKRISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPFWVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAISCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWANDVSKKWHVERDEDIKEKPLIKELSKILGAKTPN
Homology
BLAST of CaUC02G027970 vs. NCBI nr
Match: XP_038887935.1 (uncharacterized protein LOC120077905 [Benincasa hispida])

HSP 1 Score: 422.2 bits (1084), Expect = 5.0e-114
Identity = 240/393 (61.07%), Postives = 248/393 (63.10%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLAQKN  QKFPAQSPPSSHSP DGESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKNPAQKFPAQSPPSSHSPVDGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA SNGSFSTSKWVLPSNPNYRSVS+D+LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESADSNGSFSTSKWVLPSNPNYRSVSIDSLNPLRAFLSLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENSVLASTANDLRTDKHTP+NPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSVLASTANDLRTDKHTPVNPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFAVATALVFGGATLIFG+TISKLD+NNASEIQTKGKSMIEPKMEMIREQL+PFKVWA+
Sbjct: 301 KAFAVATALVFGGATLIFGYTISKLDLNNASEIQTKGKSMIEPKMEMIREQLIPFKVWAD 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           D+SKKWHVERDEDIKEKPLIKELSKILGAKTPN
Sbjct: 361 DMSKKWHVERDEDIKEKPLIKELSKILGAKTPN 255

BLAST of CaUC02G027970 vs. NCBI nr
Match: KAA0040223.1 (Coiled-coil domain-containing protein 21, putative isoform 2 [Cucumis melo var. makuwa] >TYK07125.1 Coiled-coil domain-containing protein 21, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-112
Identity = 248/401 (61.85%), Postives = 269/401 (67.08%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQ       
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQ------- 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSF---LCDTVCALGQWEN 180
                                    +F+  P       +LLC F   + +T C       
Sbjct: 121 -------------------------NFEMKPP------ILLCIFEVLIVETRC------- 180

Query: 181 FPFWVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTV 240
                  Y       +T+   +       D C    L           +N   F      
Sbjct: 181 -----QSYNDSDAPGKTI---EEGFSEVGDFCGSREL-----------RNRRTF------ 240

Query: 241 CAISCNSFFVFGFVLA-----SVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAA 300
                  F V G  L+     S+  +WELPQSEN +LASTANDLRTDKHTP+NPEKLKAA
Sbjct: 241 ---RVEMFGVGGIQLSTTHPVSLSKEWELPQSENLILASTANDLRTDKHTPMNPEKLKAA 300

Query: 301 AEGLAHVGKAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQL 360
           AEGLAHVGKAFAVATALVFG ATLIFGFT+SKLD+NNASEIQTKGKSMIEPKMEMIR+Q 
Sbjct: 301 AEGLAHVGKAFAVATALVFGAATLIFGFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQF 328

Query: 361 VPFKVWANDVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           VPFKVWA+DVSKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 VPFKVWADDVSKKWHVERDNDIKEKPLIKELSKILGAKTPN 328

BLAST of CaUC02G027970 vs. NCBI nr
Match: XP_008455465.1 (PREDICTED: uncharacterized protein LOC103495622 [Cucumis melo])

HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-111
Identity = 237/393 (60.31%), Postives = 246/393 (62.60%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENS+LASTANDLRTDKHTP+NPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSILASTANDLRTDKHTPMNPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFAVATALVFGGATLIFGFT+SKLD+NNASEIQTKGKSMIEPKMEMIR+Q VPFKVWA+
Sbjct: 301 KAFAVATALVFGGATLIFGFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQFVPFKVWAD 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           DVSKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 DVSKKWHVERDNDIKEKPLIKELSKILGAKTPN 255

BLAST of CaUC02G027970 vs. NCBI nr
Match: XP_004144510.1 (uncharacterized protein LOC101204303 [Cucumis sativus] >KGN43498.1 hypothetical protein Csa_020421 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 9.2e-108
Identity = 231/393 (58.78%), Postives = 241/393 (61.32%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT  KFPAQSPPSSHS   GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAHKFPAQSPPSSHSLPHGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPS  FREESA S+GSFSTSKWVLPS+PNYRSVS ++LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSTIFREESANSSGSFSTSKWVLPSDPNYRSVSSNSLNPLRDFLSLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENS+LASTANDLRTDKHTPINPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSILASTANDLRTDKHTPINPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFA ATALVFGGATLIFGFT+SKLD+NNASEIQTKGK MIEPKMEMIR+QLVPFKVWA+
Sbjct: 301 KAFAAATALVFGGATLIFGFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVWAD 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           D+SKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 DMSKKWHVERDNDIKEKPLIKELSKILGAKTPN 255

BLAST of CaUC02G027970 vs. NCBI nr
Match: XP_022135886.1 (uncharacterized protein LOC111007726 [Momordica charantia])

HSP 1 Score: 396.4 bits (1017), Expect = 3.0e-106
Identity = 226/393 (57.51%), Postives = 240/393 (61.07%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHA+GRL QKNTTQKFPAQ PPSSHSPADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAIGRLVQKNTTQKFPAQPPPSSHSPADGELQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FRE+SA SNGS  TSKWVLPS+PN RSVS DALNPLR FL+LPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREQSADSNGSLVTSKWVLPSDPNRRSVSSDALNPLRAFLTLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENSVLASTANDLR DKHT INPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSVLASTANDLRADKHTTINPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFA+ATALVFGGATLIFGFT+SKLD+NN++EIQTKG+++IEPKMEMIREQLVPFK WA 
Sbjct: 301 KAFAIATALVFGGATLIFGFTVSKLDLNNSNEIQTKGRNLIEPKMEMIREQLVPFKTWAE 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           D+SKKWHVERD+DIKEKPLIKELSK LGAKTPN
Sbjct: 361 DMSKKWHVERDKDIKEKPLIKELSKTLGAKTPN 255

BLAST of CaUC02G027970 vs. ExPASy TrEMBL
Match: A0A5D3C6S4 (Coiled-coil domain-containing protein 21, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004460 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 7.8e-113
Identity = 248/401 (61.85%), Postives = 269/401 (67.08%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQ       
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQ------- 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSF---LCDTVCALGQWEN 180
                                    +F+  P       +LLC F   + +T C       
Sbjct: 121 -------------------------NFEMKPP------ILLCIFEVLIVETRC------- 180

Query: 181 FPFWVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTV 240
                  Y       +T+   +       D C    L           +N   F      
Sbjct: 181 -----QSYNDSDAPGKTI---EEGFSEVGDFCGSREL-----------RNRRTF------ 240

Query: 241 CAISCNSFFVFGFVLA-----SVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAA 300
                  F V G  L+     S+  +WELPQSEN +LASTANDLRTDKHTP+NPEKLKAA
Sbjct: 241 ---RVEMFGVGGIQLSTTHPVSLSKEWELPQSENLILASTANDLRTDKHTPMNPEKLKAA 300

Query: 301 AEGLAHVGKAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQL 360
           AEGLAHVGKAFAVATALVFG ATLIFGFT+SKLD+NNASEIQTKGKSMIEPKMEMIR+Q 
Sbjct: 301 AEGLAHVGKAFAVATALVFGAATLIFGFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQF 328

Query: 361 VPFKVWANDVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           VPFKVWA+DVSKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 VPFKVWADDVSKKWHVERDNDIKEKPLIKELSKILGAKTPN 328

BLAST of CaUC02G027970 vs. ExPASy TrEMBL
Match: A0A1S3C0Z0 (uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.1e-111
Identity = 237/393 (60.31%), Postives = 246/393 (62.60%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT QKFPA+SPPSSHS ADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FREESA S+GSFSTSKWVLPS+PNYRSVS DALNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENS+LASTANDLRTDKHTP+NPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSILASTANDLRTDKHTPMNPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFAVATALVFGGATLIFGFT+SKLD+NNASEIQTKGKSMIEPKMEMIR+Q VPFKVWA+
Sbjct: 301 KAFAVATALVFGGATLIFGFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQFVPFKVWAD 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           DVSKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 DVSKKWHVERDNDIKEKPLIKELSKILGAKTPN 255

BLAST of CaUC02G027970 vs. ExPASy TrEMBL
Match: A0A0A0K240 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 4.5e-108
Identity = 231/393 (58.78%), Postives = 241/393 (61.32%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNT  KFPAQSPPSSHS   GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAHKFPAQSPPSSHSLPHGEPQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPS  FREESA S+GSFSTSKWVLPS+PNYRSVS ++LNPLR FLSLPQVTFGPKR
Sbjct: 61  LRHSLPSTIFREESANSSGSFSTSKWVLPSDPNYRSVSSNSLNPLRDFLSLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENS+LASTANDLRTDKHTPINPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSILASTANDLRTDKHTPINPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFA ATALVFGGATLIFGFT+SKLD+NNASEIQTKGK MIEPKMEMIR+QLVPFKVWA+
Sbjct: 301 KAFAAATALVFGGATLIFGFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVWAD 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           D+SKKWHVERD DIKEKPLIKELSKILGAKTPN
Sbjct: 361 DMSKKWHVERDNDIKEKPLIKELSKILGAKTPN 255

BLAST of CaUC02G027970 vs. ExPASy TrEMBL
Match: A0A6J1C1Z9 (uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007726 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.4e-106
Identity = 226/393 (57.51%), Postives = 240/393 (61.07%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLAGKEAAYFIQESKHA+GRL QKNTTQKFPAQ PPSSHSPADGE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAIGRLVQKNTTQKFPAQPPPSSHSPADGELQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK FRE+SA SNGS  TSKWVLPS+PN RSVS DALNPLR FL+LPQVTFGPKR
Sbjct: 61  LRHSLPSKIFREQSADSNGSLVTSKWVLPSDPNRRSVSSDALNPLRAFLTLPQVTFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQSENSVLASTANDLR DKHT INPEKLKAAAEGLAHVG
Sbjct: 241 ------------------WELPQSENSVLASTANDLRADKHTTINPEKLKAAAEGLAHVG 255

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFA+ATALVFGGATLIFGFT+SKLD+NN++EIQTKG+++IEPKMEMIREQLVPFK WA 
Sbjct: 301 KAFAIATALVFGGATLIFGFTVSKLDLNNSNEIQTKGRNLIEPKMEMIREQLVPFKTWAE 255

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
           D+SKKWHVERD+DIKEKPLIKELSK LGAKTPN
Sbjct: 361 DMSKKWHVERDKDIKEKPLIKELSKTLGAKTPN 255

BLAST of CaUC02G027970 vs. ExPASy TrEMBL
Match: A0A6J1I0D6 (uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 7.6e-100
Identity = 219/393 (55.73%), Postives = 236/393 (60.05%), Query Frame = 0

Query: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTTQKFPAQSPPSSHSPADGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLA     QKFPAQ PPSS+S  DGESQADILPEV
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLA-----QKFPAQPPPSSNSTTDGESQADILPEV 60

Query: 61  LRHSLPSKFFREESAGSNGSFSTSKWVLPSNPNYRSVSLDALNPLRGFLSLPQVTFGPKR 120
           LRHSLPSK +RE+SA S+GS STSKWVLPSNPNYRSVS D+LNPLR F+SLPQV+FGPKR
Sbjct: 61  LRHSLPSKIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSFGPKR 120

Query: 121 ISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQWENFPF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 WVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSSTVCAI 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKHTPINPEKLKAAAEGLAHVG 300
                             WELPQS NSVLASTANDLRTDKHTPINPEKLKAAAEGLAH+G
Sbjct: 241 ------------------WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIG 250

Query: 301 KAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVPFKVWAN 360
           KAFAVATALVFGGATLIFG T+SKLD+NNA+EIQTKGKSMIEP+M+MIREQLVPFKVWA+
Sbjct: 301 KAFAVATALVFGGATLIFGITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWAD 250

Query: 361 DVSKKWHVERDEDIKEKPLIKELSKILGAKTPN 394
            +SKKWHVER++D KEKPLIKELSK LGAKTPN
Sbjct: 361 GMSKKWHVEREKDTKEKPLIKELSKTLGAKTPN 250

BLAST of CaUC02G027970 vs. TAIR 10
Match: AT1G05060.1 (unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-61
Identity = 159/399 (39.85%), Postives = 198/399 (49.62%), Query Frame = 0

Query: 1   MSFL-AGRLAGKEAAYFIQESKHAVGRLAQKN--TTQKFPAQSPPSSHSPADGESQADIL 60
           MSFL AGRLAGKEAAYF QESKHAV RLA+K+  T +K P+ SPP        E Q D+L
Sbjct: 1   MSFLGAGRLAGKEAAYFFQESKHAVNRLAEKSPATGKKLPS-SPPD-----PPEIQPDVL 60

Query: 61  PEVLRHSLPSKFF-REESAGSNGSFSTSKWVLPSNPNYR-SVSLDALNPLRGFLSLPQVT 120
           PE+LRHSLPSK + R     S   F  SKW L S+PN   S+S D LNPLRG++SLPQVT
Sbjct: 61  PEILRHSLPSKIYGRPPDPSSLSQF--SKWALESDPNATVSISPDVLNPLRGYVSLPQVT 120

Query: 121 FGPKRISKWNFQFFSCLCFLIPMPNWFDELDFDNHPYWTWFDFLLLCSFLCDTVCALGQW 180
           FG +R                                                       
Sbjct: 121 FGRRR------------------------------------------------------- 180

Query: 181 ENFPFWVTQYRHVPLTEETVVGSDCWIKICWDMCFCNSLYHLMLGAFPSKQNNYLFLSSS 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 TVCAISCNSFFVFGFVLASVGLKWELPQSENSVLASTANDLRTDKH-TPINPEKLKAAAE 300
                                  W+LP+SENSVLASTAN+LR D++ TP+NPEKLKAA E
Sbjct: 241 -----------------------WDLPESENSVLASTANELRRDRYGTPVNPEKLKAAGE 253

Query: 301 GLAHVGKAFAVATALVFGGATLIFGFTISKLDINNASEIQTKGKSMIEPKMEMIREQLVP 360
           GL H+GKAFA AT ++FG ATL+FG   SKLD+ NA +I+TKGK + +PK+E ++EQ+ P
Sbjct: 301 GLQHIGKAFAAATIIIFGSATLVFGTAASKLDMRNADDIRTKGKDLFQPKLESMKEQVEP 253

Query: 361 FKVWANDVSKKWHVERD--EDIKEKPLIKELSKILGAKT 392
            + WA ++SKKWH+E +    IKEKP++KELSKILG K+
Sbjct: 361 LRTWAENMSKKWHIENEGGNTIKEKPILKELSKILGPKS 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887935.15.0e-11461.07uncharacterized protein LOC120077905 [Benincasa hispida][more]
KAA0040223.11.6e-11261.85Coiled-coil domain-containing protein 21, putative isoform 2 [Cucumis melo var. ... [more]
XP_008455465.12.3e-11160.31PREDICTED: uncharacterized protein LOC103495622 [Cucumis melo][more]
XP_004144510.19.2e-10858.78uncharacterized protein LOC101204303 [Cucumis sativus] >KGN43498.1 hypothetical ... [more]
XP_022135886.13.0e-10657.51uncharacterized protein LOC111007726 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6S47.8e-11361.85Coiled-coil domain-containing protein 21, putative isoform 2 OS=Cucumis melo var... [more]
A0A1S3C0Z01.1e-11160.31uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=... [more]
A0A0A0K2404.5e-10858.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1[more]
A0A6J1C1Z91.4e-10657.51uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1I0D67.6e-10055.73uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292... [more]
Match NameE-valueIdentityDescription
AT1G05060.11.1e-6139.85unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..52
NoneNo IPR availablePANTHERPTHR36704:SF1PROTEIN, PUTATIVE-RELATEDcoord: 258..392
coord: 1..121
NoneNo IPR availablePANTHERPTHR36704PROTEIN, PUTATIVE-RELATEDcoord: 258..392
coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G027970.1CaUC02G027970.1mRNA