CaUC02G027220 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G027220
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Wound-responsive family protein
Location	Ciama_Chr02: 1630414 .. 1632196 (-)
RNA-Seq Expression	CaUC02G027220
Synteny	CaUC02G027220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGGGTTTATTTCTCAGGCTAAGAAGTTTTCCTCCGCCGTCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGGTCATGTACCTTAGTTGTTGGGGTCCTAATAACTGAACTGAACGCACCGTCCCGACCGCGGTTCAGCTTAAGGGTCGTGATTGTAATTAATGGGAGATGGGCGGCGGTCTGATTTTTTTTTTTTTTTGAAGGATTTGTAAAAGAAATTCCCTTTTTTATTATTTAATAAATTGAAATTGATGGCTTTTTCAGTGCTTTAATTTCTGTTGCACATTGATGATTTTGTTGAGTAAGAGGGGGTGAAATTTTCAATTTTTACTTTAGGAGGGATCAATTTCATCATAAACTTCCAATTTCATTAAATTAGACTCTCAACTTTAAGGGGTTGTTCAGGACGCCGAAATGTAATTAGGATTACTGAAAATCAAAGAAGTGTTGGAATGCATGAGGTGTCGAGGGTGAAACGGGAATGAGATTGTAAAACGGGAAAACCGTGAGAATGAGGGTTTAGTTAAAAACTATTGGAACGAAATGAGTTTAATATTTAAATCGAACCAAAAGTCTCAATTCAAACATGGATTTTCAATTACATTACAATCTAAAAATCATTATATTTACAGGCCCCCAAACAGGTTTAAGGATTGCAATTTTAATCCCATTCAATTTCTCTTAATTTGTTCACTAGTTTTAATTTTTTTTTAAAAAAAAAAAAAAGAAGAAGAAAAGAAAAAGGAAGAAAAGAAAAATAGAAAGCTTCATAAACTTATTTAATTGAAACTTATTTAATTTCAATTAAATAAAGTTGTGCTAAAAATAGGTTGGATCAATTTACAAATTAACCCTTGGAAAATCCATATATATCCATTTAAAGAAACCGTTCTAATTTCGTTATCTAACAAAACACTTATTTAAATTTAAAGTTAAATCGGATATCATTAGGAATCAAGTTTTTTTTAATTATTTTTAAATATAACAAAATGAACTACTATTTATAAATATAAAAAAATTCCAACAGAAAGATTACGTTACCTGTAAGTTCACTGTAATCGATCGTTCAAATCTTCCAAATATAAGGACAATCAAATAATAAACAACAAATACAACAGCTGCTAATAGGATCACAAATTTGAACAGTAAAAAGCCACGTCATAAAAGGAAAAATTTTAAAATCCTATGTCTTAGTTAACTTGCGCTGTTTTGTGGGAGAAATACCAATATTGTATAAGACACGTGGAAATGGAAATGGTAAACCGTGTGCCAACAAATTTCAGAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTACATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTGTATAAAAACCTCACTCCACCTTCAAATTTCACCAACAAAAATTTGAGATTCAAAACCGATTTTAGAGAAAAATAAAAATAAAAAAGAAAAGAAAAATGAGTTCATCAACAAGAGCTTTGGTCGTAGCAGCTGCAGTCGGCGTCGTGGAGGCTCTCAAGGATCAAGGAATCTGCCGGTGGAATCATGTCTTAAGATCCGCCCATCACTACGCCAGAAACCATGTCCGGTCTATTTCTCAGGCCAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCACCTCCAACAGTCCGAGGAATCTCTGAGAACGGTGATGTACCTTAGCTGTTGGGGTCCTAATAACTGA

mRNA sequence

ATGCGGGGTTTATTTCTCAGGCTAAGAAGTTTTCCTCCGCCGTCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGGTCATAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTACATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTCTGCAGTCGGCGTCGTGGAGGCTCTCAAGGATCAAGGAATCTGCCGGTGGAATCATGTCTTAAGATCCGCCCATCACTACGCCAGAAACCATGTCCGGTCTATTTCTCAGGCCAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCACCTCCAACAGTCCGAGGAATCTCTGAGAACGGTGATGTACCTTAGCTGTTGGGGTCCTAATAACTGA

Coding sequence (CDS)

ATGCGGGGTTTATTTCTCAGGCTAAGAAGTTTTCCTCCGCCGTCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGGTCATAATTTTACTCCAAAACCCAATCCTACCCCCTTCACTTACATCTCCAAAAGGCAGATTCAAGGGACAATTAAGTCTATTCACAAGAAAAAGTATGGGTCCCATCCAAAACCAAACACAAAAACCACGGGCTCCTCTCCTTCCGGCAGCCTCTCTGCAGTCGGCGTCGTGGAGGCTCTCAAGGATCAAGGAATCTGCCGGTGGAATCATGTCTTAAGATCCGCCCATCACTACGCCAGAAACCATGTCCGGTCTATTTCTCAGGCCAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCACCTCCAACAGTCCGAGGAATCTCTGAGAACGGTGATGTACCTTAGCTGTTGGGGTCCTAATAACTGA

Protein sequence

MRGLFLRLRSFPPPSRTRVGGISEEGHNFTPKPNPTPFTYISKRQIQGTIKSIHKKKYGSHPKPNTKTTGSSPSGSLSAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRTVMYLSCWGPNN

Homology

[Close]

BLAST of CaUC02G027220 vs. NCBI nr
Match: XP_004136808.1 (uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED: uncharacterized protein LOC103495545 [Cucumis melo] >KAA0031605.1 Wound-responsive family protein [Cucumis melo var. makuwa] >KGN43576.1 hypothetical protein Csa_020502 [Cucumis sativus] >TYK07057.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHVRSISQAKKLSSAVPSAN  QQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. NCBI nr
Match: XP_038888472.1 (uncharacterized protein LOC120078309 [Benincasa hispida])

HSP 1 Score: 137.9 bits (346), Expect = 7.1e-29
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRS HHYARNHVRSISQAKKLSS VPSANHL++SEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHLLRSTHHYARNHVRSISQAKKLSSTVPSANHLRRSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. NCBI nr
Match: XP_008455358.1 (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wound-responsive family protein [Cucumis melo var. makuwa] >TYK07056.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 7.9e-28
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN LQQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSANRLQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. NCBI nr
Match: XP_004136807.1 (uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical protein Csa_020183 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-27
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHV S+SQAKK SSAV SAN LQQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSANRLQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. NCBI nr
Match: XP_038888347.1 (uncharacterized protein LOC120078196 [Benincasa hispida])

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-24
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+ RS HHYARNHVRSISQAKKLSSAVPSANHL+QSEESLR 
Sbjct: 12  ATVGVVEALKDQGICRWNHLFRSTHHYARNHVRSISQAKKLSSAVPSANHLRQSEESLRM 71

Query: 138 VMYLSC 144
           VMYLSC
Sbjct: 72  VMYLSC 77

[Close]

BLAST of CaUC02G027220 vs. ExPASy TrEMBL
Match: A0A5D3C5F5 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003750 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHVRSISQAKKLSSAVPSAN  QQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. ExPASy TrEMBL
Match: A0A0A0K6Y8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHVRSISQAKKLSSAVPSAN  QQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. ExPASy TrEMBL
Match: A0A1S3C0A5 (uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHVRSISQAKKLSSAVPSAN  QQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. ExPASy TrEMBL
Match: A0A5D3C9S0 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003740 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN LQQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSANRLQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. ExPASy TrEMBL
Match: A0A1S3C1Y6 (uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSANHLQQSEESLRT 137
           + VGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN LQQSEESLRT
Sbjct: 12  ATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSANRLQQSEESLRT 71

Query: 138 VMYLSCWGPNN 149
           VMYLSCWGPNN
Sbjct: 72  VMYLSCWGPNN 82

[Close]

BLAST of CaUC02G027220 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 98.2 bits (243), Expect = 5.8e-21
Identity = 47/72 (65.28%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 78  SAVGVVEALKDQ-GICRWNHVLRSAHHYARNHVRSISQAKKL-SSAVPSANHLQQSEESL 137
           +++G VEALKDQ G+CRWN+V+RSA+ Y RN++RS+SQAKKL SS++   N  +Q+EESL
Sbjct: 12  ASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYTNKTKQAEESL 71

Query: 138 RTVMYLSCWGPN 148
           RTVMYLSCWGP+
Sbjct: 72  RTVMYLSCWGPS 83

[Close]

BLAST of CaUC02G027220 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 88.2 bits (217), Expect = 6.0e-18
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 79  AVGVVEALKDQ-GICRWNHVLRSAHHYARNHVRSISQAKKLSSAVPSA--------NHLQ 138
           ++G VEALKDQ G+CRWN++LRS + + RN+VRS+SQ K+ SS+  SA           +
Sbjct: 13  SIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTSSGESEKAK 72

Query: 139 QSEESLRTVMYLSCWGPN 148
           ++EESLRTVMYLSCWGPN
Sbjct: 73  KAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CaUC02G027220 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05
Identity = 28/78 (35.90%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 78  SAVGVVEALKDQGICRWNHVLRSAHHYARNHVRSISQAKKLS--SAVPSANHLQQS---- 137
           +A+  VE LKDQG+ RWN++ R  H  A   VR+I+   + S  ++  SA  ++      
Sbjct: 13  TAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLST 72

Query: 138 ---EESLRTVMYLSCWGP 147
              E S    M LSC+GP
Sbjct: 73  TPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:

BLAST of CaUC02G027220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136808.1	2.5e-29	92.96	uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED...	[more]
XP_038888472.1	7.1e-29	90.14	uncharacterized protein LOC120078309 [Benincasa hispida]	[more]
XP_008455358.1	7.9e-28	90.14	PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wou...	[more]
XP_004136807.1	1.3e-27	88.73	uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical ...	[more]
XP_038888347.1	2.4e-24	89.39	uncharacterized protein LOC120078196 [Benincasa hispida]	[more]

BLAST of CaUC02G027220 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G027220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5F5	1.2e-29	92.96	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0K6Y8	1.2e-29	92.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1	[more]
A0A1S3C0A5	1.2e-29	92.96	uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=...	[more]
A0A5D3C9S0	3.8e-28	90.14	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1Y6	3.8e-28	90.14	uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=...	[more]

BLAST of CaUC02G027220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	5.8e-21	65.28	Wound-responsive family protein	[more]
AT4G10270.1	6.0e-18	56.41	Wound-responsive family protein	[more]
AT4G33560.1	2.0e-05	35.90	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 79..146 e-value: 3.9E-29 score: 101.5
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 78..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..76
None	No IPR available	PANTHER	PTHR33090:SF56	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 78..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G027220.1	CaUC02G027220.1	mRNA