CaUC02G026390 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G026390
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRibosomal protein L2 family
LocationCiama_Chr02: 715367 .. 724887 (-)
RNA-Seq ExpressionCaUC02G026390
SyntenyCaUC02G026390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTGTCTCTTGGTCGAAGTGCTTCTGATGAGATTCGACCAGGCCTTTACAAGGTTTCCAAGGTGAATCTCTTTTTTCTCATTGCATGTACTTCAAGTGTTCTTTTTCTGTAGTCTTCAGGTAGTAACATCCACTCTTCTATTTTTCAGCTTCTGCACGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGTAAACCAGACATGCACTACTTTTAAGTTTTAACACTGACAAACTCTGCTAAGAAGTTATAAATTGTTAAGTTGCTATTTCCTTTTTCAATTTAAATACCACGATATTTAAATTTAATTAATTATGCCTTCTGTTCTAGTTTAGCAATTGAAGGATCGGATAAATTGTGCTCAATAAATTTCCATAACTATGAATACAAAATTCTGAAATTTTCGTTTGAGAAAGATATTTTAAAAATGAAAATTTTGTCGAAAAGAAAGTTCCAACTTTGTATCACATGGTTAGCATTTCAATTCTGTTAGAAGGGACTTTAAGAATAAACTGCTTAAAAGAAAATGCTCGGGTATTTTCTTTGTTTTAGAATAATGATTGATTTAATTTTTAATGTTTTGTTATACAGGCTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTTGTGTGTGCCCCTTTGAACACATGACATTTATTGAGTTTTCTTTTGTAATAAACTGGTTCTAAATCTGATTGCACTATTTGAATGTGGTGATTCAACAAAAAGTTCTAGTATCATTTTATATATAATCTGTGTTATGATACGTATGAACTTGGTGGTTGGTTGCTTTATTGATGTTTGATGATGTTAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAAGGTCAGTAAATACACACTTTGTGCCTGCAAGCCGTACTTATAGTAAAAAATTGTTGGTTATAAATCAGATTCGTGGAACAGGTGTGGTGGAGCTTGTGTCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGCATACTGGTTTGTACTTGATCTTTCCTTAAATATATATTGAACTTGACTGACTTGGAGATAAGGTTACATAGGCTTGTTCCGGTAATAGTGTTATTGTCACTTTTAACTCTCATCTCAAATTAAGGGTGTGTTTGGAGATGTTTTTGGAATAAGTACTTTGAGGAAAACACCCTTTTTATAGGCACTTTTATATTGCCATTGAGAGAACGGAGTGTCTACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACCGGGTTGTTCTGTTGTGGGCATAGAACAAATTGTTGATTCCTTCCTCTGGTTTTTGTTCTGGAAGTTCGATTTTTTATCAAGCAATTTGCAGTTCCAAAGAGAAAGGACTTTTATTTGTTTTTTCTCTTCTAAAAGCCGTAGGCTGTTTTGACCTTACTTGAACATGATTTGTTCTACTGTTCTATAGGTTGTACATTTGTTTTGTAGGCTGTTCAGTAAGAAGTATTTGATAACAAATAACTTTGATATTTGTTTCTATATCCTTCGAAGTACTTTTCTGGGTCAACGTTTTTAGGTACCAGTCCATAAGCCATACATTTTATTTCCAAACAATGAAAATTTAATGTAAAGTGTTAACTGAAACAGGATATCGATTGACTTAGTTGAAGTATGAGACCAAGAGACATTATATTTTGGCATCTCGTTAGAATGATGTTTGAGATGTTTGATTTGATTTGATTGCAGCGTGCGTTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATGATTCTGACGTTGAATCTGCCTAAATCTCTCCAACATAGGAATCCCCATTATTGTTTACCAAATTAGGATGATATATGTGAAAGCAATGCAATGCCTCTCCCTAGGATTCAATGCCATGAAATATATATGATTGGGGATTCCAACTTCATCCTTGTGATTTTGGTTTGTTTTTATAAATTAATGTAGAAATATAAGTTAGAAACACCCAAATATTGCTCTTTTTTAAGTGTTGTTTAGTTCAACAACTCTCAAGGAAATCCTCAATTTTGTTGTGTTTAGTGAGATGGACAACTGGTAGAATGATTTGGTAGATTTTCAATAGTATATTTATTGATCCAGTCATTGGCCTTTACTTTCTTTCACAATAGTATTCTTTATCAAATTCTAGCCTGGGAAATTGGAGTCGATGACTAAACTAAATCAAAAGCTCACCTTTGAAGAATGGTTGAACGATTTTTTTTTTTTTTCTTTTTTTCTTTCTCTTTTTTATATTATATATATAATAAAAAAACCTAAAAGTGGCTAATTGATTGTAGGCTAGGAGAGTACCATTTTGAAATTGCAAAGTACCATTTTGTATTATACTTGTGACCCTAGTCTCACTATTTTAGGGATAATTTGTATCCTTTCATTTTCTATTGTTTTTTAACATTATATTAATCAGTATCTCATTAGTTTGTATAAACATTCACCCTTCTCTTATGTAAACAAACTATTTTCGAGAATCAATTTAGACTTTTTAGTTTTCATATTATTTTAGGAGAATGCTTTGTTTGTTTGTTCTAATCTTTTCTATCATTATTTAACAACGATTAGCAATAGAAAAGTTTGTTGAGAATAAAGGAAAGTTGTGGAAAAGATAGTTACTAAAATTCAATAATAGATATTGAAAGATATAAAACATGTTGCCAAGGTTTAAAATGTCGATATCGACGAAATATCGAAGTCTTAATTTTATGAAATTTCAATGGGAATATCGATAAAATGTCAATTTGATAAATATTTCTGGAGAAAATATAAAAACAAGAAATTCACAAAATAAGTTTAAAGTAGTAAATAAACATTTAATGATTCTTAAACAAGTTAACAATTAACATGTATATTATTTATGTTATATTTACATTAGTAACATTTTGTTGCTTAGTTTTTATGTTTTATAGATTTTTCTATGATGTAATGGAAAGTATCAATAGAAATATCGAGATGTCAATGAAAATTTAATACTATGATTGTTGCTATAACAAAAGGATACAAAAGACATTGATTAATCCTTAATATTGAAATGTTCCATTTATAAATATATGAATATTTTAATATCCGGTTTGATTTAATAATCAAAATTGGTTCGATTATTCGAAAAAAATGGGTTGGATTCCGGTTTAGTAAAAAAACCGGAGAAACCCGATGAAACATTGATTCAGAGTTGTATACTTCCTCTTGGAGCAGCAGCAGCCGAAAGCCACAAAACCCTCTCCGGCCGTCGTATTTCTCTTTGCTTCCTCTCAATCTTCGAGGTAATATTCTCTAATCTTCTTTCCCTTTCATTTCTTCATTGCATTATCTATGATGGGTTTTGCTCGCTGCAATTTCAATAACTTTACACTTAATTTTGATTTTATGAAGAATCCCAAGTACCTGGAATTATTCCCTTTCGCACTGCTTCAATCGGAAGGGTCATGGCTATGAGATCCGCGCCCGCGTTTGCTCTTCGGGGCCTCAGAAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCAATCAGGAACCCACCTCCGACCTTCTAGTTTCTGGCAAGTCCCTCTTCCCTTTTTCCTTTATCTCATCTTCTTTTCTGCGCCTTTCTTTCTGTTTACTTTCTTTATCTTTTGATTTTGAGTTCAAAGATTTTCTTGTGGTTGGAATGTTTGTCTACTCTGTGTGTCCTGGTTATTGTGAAACGTCTTGTGATTTAATTGCTATCTTTTAATTTTCTGGAACGCAGAATGCTTATGTACATTTTTGGTTTTGTTACTTTCTTCATTTATTATGTGCTAGACATACTATCAAAAGGTGGAATAAAACAGTCTAGGGGCAGTGGAAACCTCTGCCCAAAAACTACAAAAGAAGGGCCTTCTAATTGTTAATAATAAGCATACCTCTTGTTAATAATTACTTTTCTACACTTGCTCATTTTGATTCTTTATGTAATAGTGTTAAGCTCACCATCTCGGGGTGGTGCTCAAACCATGGGAAATTTTTTGAAGGTTTCTAACTTTCTAGACTTGCCCTTCAATCTGTAGCTTCCCTCTTCGTATTAATCACCTGTTCTGGAACAAGACTGGTGTTATTTGGCTCAACTTCATTTGACACTTTCTTTGGTGCACTTGGATTGAAAGAAACCAAATATATCTATCTCCATCACTCTTTTATTAGCTCCTTTTTCGTTCTTTTTTTTCTTTAATTCTTTTTTTGTTAAAATAACACAATGCTTCATTCAGCTCCTTGGACCTTACCTAACTAACCTTCCACGCTAGAAATTTCATTAGTAAAGAACCTGTAAAATGGACCTTTACTTCGTTGATCTCTTCTGATAAGAGCTAGAATTTCTTTATCAATATGGGTAATTGTCAAAGGAAGAATTAAAGAGCTCCCTCTTCTCTCCCAAATACAGACTCCCACAAGGATTTTAGCCAAAAAGATAGCCATGTAAGCCCTACACTCGAAATATATAATGACTCCCAACAATAACGTTCTCTCGGGCCTACATGTAACGAACTTCTAACAATTTGCTATTCTTGATTCCAACTCCTCCCCTTCTCTTATACATATATTTAATCCAAGGTCTAAAATCTTCCATGATCAAAGCAAGGCACCTAAGAGAGACTCTTCATCCTTTCAATATACAGCTTGTGCAATAACTTCTTCTGTTTTTGGTGGCTCCTTTCATTAGGTTGGTCTCTGTTTTGTATCGTCATTTGTACGAATGTGGTGTCCTTAGAAAAATAATAATAATGATGATTGTAAATGTGGATGACAATATATATGAGATGATTTATGCTTACCCTAATGTTTTTTTAGCAGAAAGCTATACACAAATTGATGCTTAGTACTTGAGATAATATGGCTTTGGATTCTTCCAATGATTTAAAGTATGACTAGGCACACATCATCCTTGAGCAAGAGAATTGTGTTTCACCTCTTTCTGTGAGGTGCACACCTGGTGCCTTTTAGCCATGAGATCTTCTAAGGGTCTTTGGCCGAGAATTGTTGAGTTCTGTTTTCATTGAACAAAGTCTTACCATCTCCTTAGAAGAGCCTTCATTTCTTAAAACTTACAATATCTAACATCGATTCACTGTCATTAAATTGTTCTTGTAATTGAACCACTTTTAATTTAATTGTCCATATTTTATGCATAAGTTGATTCTTGATCAAATTTTTAATGAAATGTTTGAATCAAAAACTTATGCATTACATCATTAAAAGTAATAGGAGGACTACTTATGCATTACATCATTAAAAGTAATAGGAGGACTAAGTCAATACAAATAAATGTTTGAAAACCAAAATGTAAAAGGATCCCACTAAGTTAAAACTATCAAGAAAAGACTCCCCAAGGAAGAATAAGAACAACCTAGCCGGCAGCCACTATGAACAATTAATTGAACCTTAAGAAAGAAAGAAAAAAAAATAATTGATTACATTAGTAGTGTAGAATGAAAATGGACTTGGCGGAGAACACAAAAAAGAAGCATAACTCTTTGTCAAGTGTCCCATCTAAAAACACATTGAGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATCCAAAGATGCTTTGGTTCCTTTCAGATCAAATACTCCAAAGAATAGTTTGACCACATTTCATCATATTTTAGCTTTTTTCTTCAACTTCATAACACATAAGTTGATTTATTTATTTATTTATTTTTTGAAGAGCATAAGTTGAAAGTTACTCTCAAGCTTTTTTATCAAACACCTATGCCAAAATGAAAGACTATAAAAGCTGTTCTCAAATCTTACCAATTTAAGCACAGTGAATAGATAAATGAAATTAATCTTCACCTGCTAAAGACACTGGCTGAACTTAGCCATTCAAAATCAAAGCAAGTTATTTCCAACTGAATTTTGTCGACTGTGTTAAGTTTATCCAAATGAGCCAACCACATGAAGTATTAATTTTTGGGGAAAAAGTAATTTTTATCCTTGAACTTATTAAGGTTCATTAATTTTTTCACCATAAATTTTCAATTTCAACAAATCAAACGCTAGACTTAGACACTTCCCTTCAATTTCCATTACTTTCACCTACTGATTTAACAGAAACCAAAGTAAAATTCTCTGAAAACTATAGCTAATTTTAACCAAAAAAATCTTAAGCTGTTTGCAAACTTAAACTCAATCAACTCACAAGATTGATTACAGTACATTTTTCCATTGAATCAATCTCCTAAAACACACAAATTTCTCGGTGTAACATTAGATGCATTTCAGGCTTTGGTTCGCATTTCACGTTTATAATTGCAATATCTTTCTTATTTGGCTCTCCCTCCTGTTTCTGGAACAGAAAAGACTAAAGAGTGATAATTATCTTTTTTTTTTTTTTTCCTTCTTTTTATTATTTTTGTTGGTACATGAACACTTGAAGAATGAAGAAACCTGGACAGATCAAAGATTACTGAATGATGTTTTCTTATGTTTCATTCAACAGCCTGCAGTTAGAAGCTTTTTTTCCCCATATGGATCAATTGGTTGAAATAGGTTCTCGTTTGCTCAGTTTCTTGGGACTTCCGTACTAATTTTGTAAAATCTATATTTTATTGTTTATATTAATTTACCTTTGAATTATTGATGTCTGCCAAAGTATGCAATCCTAAAACTTGGAGCTTGTTTGGAATGATTTTTGAAATGCTAAAAAATGTTTGTAAGCCCTTAGAAAATCATTTCTGACTGTCCTTCAACCTCGATTGAGTTTAATTATCTTCTGTTAGAAAATATTAGTGAGCCTTTTTTTCTTTAGTAAAATATTAATGAACTTTTTGGTTTGATATTTTATCAAATTATCTTAATATCTAATTCTTATGTCATATTTTTCCTGATGTATTAGAATTCTTCTTCTAGGTTCATTATGTTACGAATACTTTTACATCATTCTTCACAGATCTAGGGACATACGGTAGGACGTTCCGTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAATCCAGGTCAAGGCGGGAAGCTCGTGCGGTCAGCGGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATACTGCTTGGTGAAACTCCCTTCGCGTGAAGAGAAGTTGATTGATTCTAGGTGCAAAGCAACAATTGGTCAGGTGTCTAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCAATGAACCCAGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGCGGTTACAAGACTCGATCTCTCAGGCGCAAAAAACAAGAATAA

mRNA sequence

ATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTGTCTCTTGGTCGAAGTGCTTCTGATGAGATTCGACCAGGCCTTTACAAGGTTTCCAAGCTTCTGCACGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGCTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAAGGTGTGGTGGAGCTTGTGTCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGCATACTGGTTGTACATTTGTTTTGTAGGCTGTTCACGTGCGTTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGCAGCAGCCGAAAGCCACAAAACCCTCTCCGGCCGTCGTATTTCTCTTTGCTTCCTCTCAATCTTCGAGAATCCCAAGTACCTGGAATTATTCCCTTTCGCACTGCTTCAATCGGAAGGGTCATGGCTATGAGATCCGCGCCCGCGTTTGCTCTTCGGGGCCTCAGAAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCAATCAGGAACCCACCTCCGACCTTCTAGTTTCTGGCAAGTCCCTCTTCCCTTTTTCCTTTATCTCATCTTCTTTTCTGCGCCTTTCTTTCTGTTTACTTTCTTTATCTTTTGATTTTGAGTTCAAAGATTTTCTTGTGGTTGGAATGTTTGTCTACTCTGTGTGTCCTGATCTAGGGACATACGGTAGGACGTTCCGTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAATCCAGGTCAAGGCGGGAAGCTCGTGCGGTCAGCGGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATACTGCTTGGTGAAACTCCCTTCGCGTGAAGAGAAGTTGATTGATTCTAGGTGCAAAGCAACAATTGGTCAGGTGTCTAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCAATGAACCCAGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGCGGTTACAAGACTCGATCTCTCAGGCGCAAAAAACAAGAATAA

Coding sequence (CDS)

ATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAAGTGTCTCTTGGTCGAAGTGCTTCTGATGAGATTCGACCAGGCCTTTACAAGGTTTCCAAGCTTCTGCACGGAAATACTGGACTTTGTTTCACAAACTTACCAAAAGAAGAGGTTGAGAGGCTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAAGGTGTGGTGGAGCTTGTGTCAGACTTCGTTGTATGTGAGGAGGGCAAGTCTCTATCACCAGAGTCAGCCGGCATACTGGTTGTACATTTGTTTTGTAGGCTGTTCACGTGCGTTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGCAGCAGCCGAAAGCCACAAAACCCTCTCCGGCCGTCGTATTTCTCTTTGCTTCCTCTCAATCTTCGAGAATCCCAAGTACCTGGAATTATTCCCTTTCGCACTGCTTCAATCGGAAGGGTCATGGCTATGAGATCCGCGCCCGCGTTTGCTCTTCGGGGCCTCAGAAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCAATCAGGAACCCACCTCCGACCTTCTAGTTTCTGGCAAGTCCCTCTTCCCTTTTTCCTTTATCTCATCTTCTTTTCTGCGCCTTTCTTTCTGTTTACTTTCTTTATCTTTTGATTTTGAGTTCAAAGATTTTCTTGTGGTTGGAATGTTTGTCTACTCTGTGTGTCCTGATCTAGGGACATACGGTAGGACGTTCCGTGAACGAATGACAAATTACATGGCTACCCTCGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTTCTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAATCCAGGTCAAGGCGGGAAGCTCGTGCGGTCAGCGGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATACTGCTTGGTGAAACTCCCTTCGCGTGAAGAGAAGTTGATTGATTCTAGGTGCAAAGCAACAATTGGTCAGGTGTCTAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCAATGAACCCAGTGGATCATCCTCATGGAGGAGGAGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGCGGTTACAAGACTCGATCTCTCAGGCGCAAAAAACAAGAATAA

Protein sequence

MDRLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILVVHLFCRLFTCVRDKDGNFSAEFGLQMEPRSSRKPQNPLRPSYFSLLPLNLRESQVPGIIPFRTASIGRVMAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLLSLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQE
Homology
[Close]
BLAST of CaUC02G026390 vs. NCBI nr
Match: XP_038902173.1 (60S ribosomal protein L2, mitochondrial [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 3.3e-101
Identity = 201/256 (78.52%), Postives = 206/256 (80.47%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLL 259
           MAMRSAPA ALRGLRRFSSRRPVSSPI +EPTSDLLVS  +                   
Sbjct: 1   MAMRSAPAVALRGLRRFSSRRPVSSPIIKEPTSDLLVSDMA------------------- 60

Query: 260 SLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 319
                                    GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI
Sbjct: 61  -------------------------GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 120

Query: 320 GTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQ 379
           GTIIHNIEINPGQGGKLVRSAGT ARILKLPE KSRYCLVKLPSREEKLID+RC+ATIGQ
Sbjct: 121 GTIIHNIEINPGQGGKLVRSAGTFARILKLPEPKSRYCLVKLPSREEKLIDARCRATIGQ 180

Query: 380 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 439
           VSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG
Sbjct: 181 VSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 212

Query: 440 KPTKCGYKTRSLRRKK 456
           KPTKCGYKTRSLRRKK
Sbjct: 241 KPTKCGYKTRSLRRKK 212

[Close]
BLAST of CaUC02G026390 vs. NCBI nr
Match: XP_004147352.1 (uncharacterized protein LOC101215226 [Cucumis sativus] >XP_031736821.1 uncharacterized protein LOC101215226 [Cucumis sativus] >KAE8651977.1 hypothetical protein Csa_006658 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.6e-90
Identity = 184/254 (72.44%), Postives = 192/254 (75.59%), Query Frame = 0 

Query: 202 MRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLLSL 261
           MRSA A ALRGLRRFSSRRPVSSPINQ                               +L
Sbjct: 4   MRSASAVALRGLRRFSSRRPVSSPINQ-------------------------------AL 63

Query: 262 SFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGT 321
                  D            P  G  GRTFRERMTNYMATLDINSQIGSCMPL  MRIGT
Sbjct: 64  ELPTSVSD------------PMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGT 123

Query: 322 IIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVS 381
           IIHNIEINPGQGGKLVRSAGTSARILKLPEGKSR CLVKLPSREEKLID++C+ATIGQVS
Sbjct: 124 IIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVS 183

Query: 382 NPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKP 441
           NP HGT+KLRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKP
Sbjct: 184 NPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKP 214

Query: 442 TKCGYKTRSLRRKK 456
           TKCGYKTRS +RK+
Sbjct: 244 TKCGYKTRSAKRKR 214

[Close]
BLAST of CaUC02G026390 vs. NCBI nr
Match: XP_008460907.1 (PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo])

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-90
Identity = 184/258 (71.32%), Postives = 194/258 (75.19%), Query Frame = 0 

Query: 202 MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSFCL 261
           MRSA A ALRGLRRFSSRRPVSSPI    ++PTSDLLVS  +                  
Sbjct: 4   MRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMA------------------ 63

Query: 262 LSLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMR 321
                                        GRTFRERM NYMATLDINSQIGSCMPL AMR
Sbjct: 64  --------------------------RVEGRTFRERMANYMATLDINSQIGSCMPLGAMR 123

Query: 322 IGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIG 381
           IGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGKSR CLVKLPSREEK ID++C+ATIG
Sbjct: 124 IGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIG 183

Query: 382 QVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPW 441
           QVSNP HG +KLRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPW
Sbjct: 184 QVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPW 217

Query: 442 GKPTKCGYKTRSLRRKKQ 457
           GKPTKCGYKTRS +RK+Q
Sbjct: 244 GKPTKCGYKTRSPKRKRQ 217

[Close]
BLAST of CaUC02G026390 vs. NCBI nr
Match: XP_022971723.1 (uncharacterized protein LOC111470392 [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 4.2e-88
Identity = 181/256 (70.70%), Postives = 194/256 (75.78%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLL 259
           MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                   
Sbjct: 1   MAMKSAASVALRGLRSFSSRSSISAPINKEPTSDLLVSDIA------------------- 60

Query: 260 SLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 319
                                    GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI
Sbjct: 61  -------------------------GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 120

Query: 320 GTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQ 379
           GTIIHNI +NPGQGGKLVRSAGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQ
Sbjct: 121 GTIIHNIGMNPGQGGKLVRSAGTCAKILKEP--TSRYCLVRLPSGTEKLIDSKCRATIGQ 180

Query: 380 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 439
           VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWG
Sbjct: 181 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 210

Query: 440 KPTKCGYKTRSLRRKK 456
           KPTKCGYKT  L+RKK
Sbjct: 241 KPTKCGYKTGPLKRKK 210

[Close]
BLAST of CaUC02G026390 vs. NCBI nr
Match: XP_022932015.1 (uncharacterized protein LOC111438344 [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 9.4e-88
Identity = 180/256 (70.31%), Postives = 194/256 (75.78%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLL 259
           MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                   
Sbjct: 1   MAMKSAASAALRGLRSFSSRSSISAPINKEPTSDLLVSDIA------------------- 60

Query: 260 SLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 319
                                    GTYGRT RERMTNYMATLDINSQIGSCMPLSAMRI
Sbjct: 61  -------------------------GTYGRTLRERMTNYMATLDINSQIGSCMPLSAMRI 120

Query: 320 GTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQ 379
           GTIIHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQ
Sbjct: 121 GTIIHNIEMNPGQGGKLVRAAGTCAKILKEP--TSRYCLVRLPSGTEKLIDSKCRATIGQ 180

Query: 380 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 439
           VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWG
Sbjct: 181 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 210

Query: 440 KPTKCGYKTRSLRRKK 456
           KPTKCGYKT  L+RKK
Sbjct: 241 KPTKCGYKTGPLKRKK 210

[Close]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match: P0C8K6 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-48
Identity = 95/146 (65.07%), Postives = 120/146 (82.19%), Query Frame = 0 

Query: 302 LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKL 361
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 362 PSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 421
           PS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 422 GKSKSSGSHGKGSRTPWGKPTKCGYK 448
           G++K     G+ S +PWGKPTK G++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFR 492

[Close]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match: Q2F969 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-48
Identity = 95/146 (65.07%), Postives = 120/146 (82.19%), Query Frame = 0 

Query: 302 LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKL 361
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 362 PSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 421
           PS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 422 GKSKSSGSHGKGSRTPWGKPTKCGYK 448
           G++K     G+ S +PWGKPTK G++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFR 492

[Close]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match: P92812 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-48
Identity = 95/146 (65.07%), Postives = 120/146 (82.19%), Query Frame = 0 

Query: 302 LDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKL 361
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 362 PSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 421
           PS  EKLIDSRC+ATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 422 GKSKSSGSHGKGSRTPWGKPTKCGYK 448
           G++K     G+ S +PWGKPTK G++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFR 492

[Close]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match: P26859 (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 4.6e-45
Identity = 92/147 (62.59%), Postives = 116/147 (78.91%), Query Frame = 0 

Query: 308 IGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEK 367
           +G+C+PL+ + IGT +HNIE NPGQG KL R+AGT A+I++  E   + C+V+LPS  +K
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQ-CIVRLPSGVDK 418

Query: 368 LIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSS 427
           LIDSRC+ATIG VSN +HG RK  KAGQSRWLGRRP+VRGVAMNPVDHPHGGGEG++K  
Sbjct: 419 LIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG- 478

Query: 428 GSHGKGSRTPWGKPTKCGYKTRSLRRK 455
              G+ S +PWGKPTK G+KT   +R+
Sbjct: 479 ---GRPSVSPWGKPTKGGFKTVVRKRR 500

[Close]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match: O21247 (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana OX=48483 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 7.1e-38
Identity = 85/151 (56.29%), Postives = 113/151 (74.83%), Query Frame = 0 

Query: 303 DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLP 362
           DI+ +IG+ +PL  + IGT+IHNIE+NPG+GGK+VRSAG+SA+++   E  + +C++KLP
Sbjct: 121 DIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKDE--NGFCMLKLP 180

Query: 363 SREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG 422
           S E +L  +   ATIG +SN  +   K+ KAG+SRW+GRRP+VRGVAMNPVDHPHGGGEG
Sbjct: 181 SGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRSRWMGRRPIVRGVAMNPVDHPHGGGEG 240

Query: 423 KSKSSGSHGKGSRTPWGKPTKCGYKTRSLRR 454
           K+    S G+ S TPW  PTK G  TRS R+
Sbjct: 241 KT----SGGRPSVTPWSWPTK-GQPTRSKRK 264

[Close]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match: A0A1S3CEQ1 (60S ribosomal protein L2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499648 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 9.8e-91
Identity = 184/258 (71.32%), Postives = 194/258 (75.19%), Query Frame = 0 

Query: 202 MRSAPAFALRGLRRFSSRRPVSSPI---NQEPTSDLLVSGKSLFPFSFISSSFLRLSFCL 261
           MRSA A ALRGLRRFSSRRPVSSPI    ++PTSDLLVS  +                  
Sbjct: 4   MRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMA------------------ 63

Query: 262 LSLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMR 321
                                        GRTFRERM NYMATLDINSQIGSCMPL AMR
Sbjct: 64  --------------------------RVEGRTFRERMANYMATLDINSQIGSCMPLGAMR 123

Query: 322 IGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIG 381
           IGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGKSR CLVKLPSREEK ID++C+ATIG
Sbjct: 124 IGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIG 183

Query: 382 QVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPW 441
           QVSNP HG +KLRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPW
Sbjct: 184 QVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPW 217

Query: 442 GKPTKCGYKTRSLRRKKQ 457
           GKPTKCGYKTRS +RK+Q
Sbjct: 244 GKPTKCGYKTRSPKRKRQ 217

[Close]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match: A0A6J1I7S9 (uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 181/256 (70.70%), Postives = 194/256 (75.78%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLL 259
           MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                   
Sbjct: 1   MAMKSAASVALRGLRSFSSRSSISAPINKEPTSDLLVSDIA------------------- 60

Query: 260 SLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 319
                                    GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI
Sbjct: 61  -------------------------GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 120

Query: 320 GTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQ 379
           GTIIHNI +NPGQGGKLVRSAGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQ
Sbjct: 121 GTIIHNIGMNPGQGGKLVRSAGTCAKILKEP--TSRYCLVRLPSGTEKLIDSKCRATIGQ 180

Query: 380 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 439
           VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWG
Sbjct: 181 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 210

Query: 440 KPTKCGYKTRSLRRKK 456
           KPTKCGYKT  L+RKK
Sbjct: 241 KPTKCGYKTGPLKRKK 210

[Close]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match: A0A6J1F113 (uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC111438344 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.6e-88
Identity = 180/256 (70.31%), Postives = 194/256 (75.78%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVSSPINQEPTSDLLVSGKSLFPFSFISSSFLRLSFCLL 259
           MAM+SA + ALRGLR FSSR  +S+PIN+EPTSDLLVS  +                   
Sbjct: 1   MAMKSAASAALRGLRSFSSRSSISAPINKEPTSDLLVSDIA------------------- 60

Query: 260 SLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRI 319
                                    GTYGRT RERMTNYMATLDINSQIGSCMPLSAMRI
Sbjct: 61  -------------------------GTYGRTLRERMTNYMATLDINSQIGSCMPLSAMRI 120

Query: 320 GTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQ 379
           GTIIHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDS+C+ATIGQ
Sbjct: 121 GTIIHNIEMNPGQGGKLVRAAGTCAKILKEP--TSRYCLVRLPSGTEKLIDSKCRATIGQ 180

Query: 380 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWG 439
           VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSRTPWG
Sbjct: 181 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 210

Query: 440 KPTKCGYKTRSLRRKK 456
           KPTKCGYKT  L+RKK
Sbjct: 241 KPTKCGYKTGPLKRKK 210

[Close]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match: A0A6J1DZS5 (uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025017 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.1e-85
Identity = 179/260 (68.85%), Postives = 194/260 (74.62%), Query Frame = 0 

Query: 200 MAMRSAPAFALRGLRRFSSRRPVS----SPINQEPTSDLLVSGKSLFPFSFISSSFLRLS 259
           MAMRSA + ALRGLRRFSS+  +S    + INQEP+SDLLVS  +               
Sbjct: 1   MAMRSAASVALRGLRRFSSKTSISGSTRASINQEPSSDLLVSDIA--------------- 60

Query: 260 FCLLSLSFDFEFKDFLVVGMFVYSVCPDLGTYGRTFRERMTNYMATLDINSQIGSCMPLS 319
                                        GTYGRTFRERMTNYMATLDINSQIGSCMPLS
Sbjct: 61  -----------------------------GTYGRTFRERMTNYMATLDINSQIGSCMPLS 120

Query: 320 AMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLPSREEKLIDSRCKA 379
           AMRIGT+IHNIE+NPGQGGKLVR+AGT A+ILK P   SRYCLV+LPS  EKLIDSRC+A
Sbjct: 121 AMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEP--TSRYCLVRLPSGTEKLIDSRCRA 180

Query: 380 TIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSHGKGSR 439
           TIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG+SKSSGS GKGSR
Sbjct: 181 TIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSR 214

Query: 440 TPWGKPTKCGYKTRSLRRKK 456
           TPWGKPTK GYKT  L+RKK
Sbjct: 241 TPWGKPTKSGYKTGPLKRKK 214

[Close]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match: A0A0A0LQ76 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302080 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 5.2e-84
Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0 

Query: 285 GTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSA 344
           G  GRTFRERMTNYMATLDINSQIGSCMPL  MRIGTIIHNIEINPGQGGKLVRSAGTSA
Sbjct: 3   GVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSA 62

Query: 345 RILKLPEGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV 404
           RILKLPEGKSR CLVKLPSREEKLID++C+ATIGQVSNP HGT+KLRKAGQSRWLGRRP 
Sbjct: 63  RILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPK 122

Query: 405 VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK 456
           VRGVAMNPVDHPHGGGEGKSKSSGSHG+GSRTPWGKPTKCGYKTRS +RK+
Sbjct: 123 VRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKR 173

[Close]
BLAST of CaUC02G026390 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 223.4 bits (568), Expect = 3.7e-58
Identity = 114/172 (66.28%), Postives = 138/172 (80.23%), Query Frame = 0 

Query: 286 TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSAR 345
           T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIE+NPGQG K+VR+AGT+A+
Sbjct: 37  TQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAK 96

Query: 346 ILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV 405
           ILK P +GK   CL+KLPS + K I+++C+ATIG VSNPSHGT+KL KAGQSRWLG RP 
Sbjct: 97  ILKEPAKGK---CLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPK 156

Query: 406 VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ 457
           VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Sbjct: 157 VRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKKK 205

[Close]
BLAST of CaUC02G026390 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 223.4 bits (568), Expect = 3.7e-58
Identity = 114/172 (66.28%), Postives = 138/172 (80.23%), Query Frame = 0 

Query: 286 TYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSAR 345
           T  ++   +M   M  +DINS IGS MPL  MRIGTIIHNIE+NPGQG K+VR+AGT+A+
Sbjct: 37  TQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAK 96

Query: 346 ILKLP-EGKSRYCLVKLPSREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPV 405
           ILK P +GK   CL+KLPS + K I+++C+ATIG VSNPSHGT+KL KAGQSRWLG RP 
Sbjct: 97  ILKEPAKGK---CLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPK 156

Query: 406 VRGVAMNPVDHPHGGGEGKSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKKQ 457
           VRGVAMNP DHPHGGGEGKSKSSGS G+ S +PWGKP K GYK+ S+++KK+
Sbjct: 157 VRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKKK 205

[Close]
BLAST of CaUC02G026390 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 194.5 bits (493), Expect = 1.8e-49
Identity = 94/127 (74.02%), Postives = 108/127 (85.04%), Query Frame = 0 

Query: 3   RLFFGANKVMQVSLGRSASDEIRPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYD 62
           + F G+NKVMQV+LGRSA DE+R G+YKVSKLL G+TGL  T++PKEEVE LFN Y D D
Sbjct: 65  KFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAYEDSD 124

Query: 63  YARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLS 122
           ++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEGK LS
Sbjct: 125 FSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEGKQLS 184

Query: 123 PESAGIL 130
           P+SA IL
Sbjct: 185 PKSAHIL 191

[Close]
BLAST of CaUC02G026390 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 132.5 bits (332), Expect = 8.6e-31
Identity = 76/153 (49.67%), Postives = 100/153 (65.36%), Query Frame = 0 

Query: 303 DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLP 362
           ++  ++G+ +PL+ M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLP
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLI-AKEGKS--ATLKLP 178

Query: 363 SREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG 422
           S E +LI   C AT+GQV N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEG
Sbjct: 179 SGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG 238

Query: 423 KSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK 456
           ++       K   TPWG P   G +TR  +RKK
Sbjct: 239 RAPIG---RKKPVTPWGYPA-LGRRTR--KRKK 262

[Close]
BLAST of CaUC02G026390 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 132.5 bits (332), Expect = 8.6e-31
Identity = 76/153 (49.67%), Postives = 100/153 (65.36%), Query Frame = 0 

Query: 303 DINSQIGSCMPLSAMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRYCLVKLP 362
           ++  ++G+ +PL+ M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLP
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLI-AKEGKS--ATLKLP 178

Query: 363 SREEKLIDSRCKATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEG 422
           S E +LI   C AT+GQV N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEG
Sbjct: 179 SGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG 238

Query: 423 KSKSSGSHGKGSRTPWGKPTKCGYKTRSLRRKK 456
           ++       K   TPWG P   G +TR  +RKK
Sbjct: 239 RAPIG---RKKPVTPWGYPA-LGRRTR--KRKK 262

The following BLAST results are available for this feature:
BLAST of CaUC02G026390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902173.13.3e-10178.5260S ribosomal protein L2, mitochondrial [Benincasa hispida][more]
XP_004147352.11.6e-9072.44uncharacterized protein LOC101215226 [Cucumis sativus] >XP_031736821.1 uncharact... [more]
XP_008460907.12.0e-9071.32PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo][more]
XP_022971723.14.2e-8870.70uncharacterized protein LOC111470392 [Cucurbita maxima][more]
XP_022932015.19.4e-8870.31uncharacterized protein LOC111438344 [Cucurbita moschata][more]
BLAST of CaUC02G026390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C8K61.2e-4865.0760S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=... [more]
Q2F9691.2e-4865.0760S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G... [more]
P928121.2e-4865.0760S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947... [more]
P268594.6e-4562.5960S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2... [more]
O212477.1e-3856.2960S ribosomal protein L2, mitochondrial OS=Reclinomonas americana OX=48483 GN=RP... [more]
BLAST of CaUC02G026390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CEQ19.8e-9171.3260S ribosomal protein L2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499648 ... [more]
A0A6J1I7S92.0e-8870.70uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392... [more]
A0A6J1F1134.6e-8870.31uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC1114383... [more]
A0A6J1DZS52.1e-8568.85uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A0A0LQ765.2e-8491.23Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302... [more]
BLAST of CaUC02G026390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G44065.13.7e-5866.28Ribosomal protein L2 family [more]
AT2G44065.23.7e-5866.28Ribosomal protein L2 family [more]
AT1G25260.11.8e-4974.02Ribosomal protein L10 family protein [more]
ATCG00830.18.6e-3149.67ribosomal protein L2 [more]
ATCG01310.18.6e-3149.67ribosomal protein L2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 306..441
e-value: 1.2E-71
score: 254.0
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 308..439
e-value: 1.6E-50
score: 170.5
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 64..129
e-value: 2.1E-20
score: 72.5
IPR04316450S ribosomal protein L10, insertion domain superfamilyGENE3D3.90.105.20coord: 68..135
e-value: 6.9E-22
score: 79.0
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 297..380
e-value: 1.4E-27
score: 97.4
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 381..457
e-value: 2.0E-26
score: 93.9
IPR005880Ribosomal protein L2, bacterial/organellar-typeTIGRFAMTIGR01171TIGR01171coord: 300..454
e-value: 3.1E-53
score: 178.9
IPR043141Ribosomal protein L10-like domain superfamilyGENE3D3.30.70.1730coord: 3..67
e-value: 1.5E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..457
NoneNo IPR availablePANTHERPTHR13691:SF539S RIBOSOMAL PROTEIN L2, MITOCHONDRIALcoord: 300..455
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 300..455
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 403..414
IPR033867Ribosome assembly factor Mrt4CDDcd05796Ribosomal_P0_likecoord: 2..122
e-value: 3.04447E-65
score: 205.119
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 308..452

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G026390.1CaUC02G026390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032543 mitochondrial translation
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
cellular_component GO:0009536 plastid
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity