CaUC01G025580 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G025580
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 37432868 .. 37435144 (-)
RNA-Seq ExpressionCaUC01G025580
SyntenyCaUC01G025580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACGAGAACTGAGGGAGGTGGCAGCGGTGGCTAATGACAGGTGTGAGATCTGGGCGCAACAACCCAAGCGGAGTGAGGCAGCCATTGGATCTTGGCAGCGCACGAACTGGAGTGCATGTGTGACATCCCAAATTTTCAAGTAATCAATTTTTTTTTTTATAAATTATTTATCTTGAATTATTTGGATAATTGTTTGAATTTTAAGACTTAATTGATTTATGTTGAGAAAATAATTCAATTTAGAGTAAGCATGACAAGGGTGTGAAAATTTGATTTTAGTTGTGCGAGATTTAGAAGTTGAAGTTAATTTTAGAATATGAAATTGGGAGAGATTTAAAAATCTGTTTAATTTAAGATAATTTGGAAATTGAAATTTGGTAAGTTCATCGTTGTGAGTTAATTAAATTAATTTGGCTTTGGCGAAAGATTTGAGTTGTGATAGAAGCAAATGGCTACGTATCTATATTTGTATATGTTAAGAAAAGGGAAAGTATTTGTATATGTTAAGAAAAGGGAAAGAATTTATATATATTTATATAAATTCATATGAGAGTTTTGGAATTTATATATATATATTTTTTTAATTTTAAGAAAAGGGAAAAAGGTAGAATACATGTGTATAATTATTAAAGGTGGTTTACGGTTTTGACTAGGAGTTTTGGCTATTTATTAAAGCCACTTAAGGTGTCAAGCAACCCAAGGTCTCCTTCTTCTTCCCCTCTTTTGTTTCACCATCCATGAGCAAATTTTTTTCTTCCTCCCTTCTTCTTCATTGAAGCCCCGCTGGCAACCCTCTCCATTTCAAATCAAGCATCGCCCGAGCACACACCGGAGCTTGCCTACCCGCCGATTGTAGCCCCAGCAGTGTTGACGTTGGACTGTGAAGCCAGAGTCCGTGAACCCACGTATGTCGTCGATGTCCGAACGCCATATCCGCTGCAATTTGCTGTTGGTCGGTCCCGTCTCTCTCTCTCTCCCCATTCAACTTGTTGGCATTGTCGTTAATCACTCCTTAATTGAGTCGTGTACACTTTATAATTATGATTATACTTACGATCGGGTCCACTACCCTATGAATGAGTGCGTTCGGATAACATATTTACCAAGTGGATCCAGTAGTGGGTTACTTATTGAGTATCTTCGAATTCATTCTTTCCTATAATACATTTTTTCAGGTAACGGTAAGAGACGAACAGACAAACGATGGGGCCAATCATCGTTTCTGCATATGATTTCATGCATATGCTTTTCATGTTTTCTCTTTACATGATATATGTTCTAGTTTTCTAAATTATTAAAAATTTTGATTTTATGTTTTAAGGGGTCTCCAAGAAAATTATTTCATGTATTTCAATTTCATTCATTAATTCATTCGATTTATTCATTTTTTTTTATATAAAATATGTCCAATTGCTTGATTCAAAACCATGTTACAAGATTATGCATACATAGAGTAGAGCCCTCGTGGTTAGAAAAGTCAAAGATCAGATAAGTTTGGCTGAAAAAAAATCAAGAAAAAAGCTCACTGACGATTGACGGAACTAACCGGAGTAAGGGTGGCACAATTAGAGAGAGAAAGAGAGACAAAAACCCATTGACGACCGACGATTGAGTGAGAGAGGCGCGACAAACAGAGGTCGATGAGCGAGCGACGTACTTCGACAATTAGGGTGGCTAGGAACTCCATGAGGTCAAGAAGAGGTGTGAGAGAAGGAGAGAATTTAGATAGAGAATGAAGAAGGATGAATGAGACGATGGTTTTTTGGAGGAGAAAATATTTGAAAAAGGGTTTAAACACACATGGGATAACGAAACATTTTCTTTATATATAACACACGTGGGGAAGACTAAAATGTAAATAACACCAATGACATTACCGAAAATATCAAACCCAATAGGCCTTTTTAGTAAAAAGTAGATTTTTCAAGCCATTCATGTAATATAGGCCTATTTTGAAGGCCTTTCATGTATAAAAGGCCTCCTTCGAACAAATCATAATTTTGAAGCCCAAATTTCAACCTATGTTTTTCTAGGATTACGAGCGGCCTTCCGAGTCCATTTTAGATTTAGGAGTTGGAGGGAGGCATTACGTCGAGTTTGCAGCCTGCAGGGAGAGAAGGGCGACGGCCATGGCTTTCAGTTTCAGTCGTCCAATACTTTGCTTGCAGTTGCAACCCCGATCCCAAACCACAACCTACGCTTCTCTCTCACTCTGCTCATAACCCTTCATTCCGCTATTTCAAGCTCCACATACTCTGATTCTGCGCCGTGA

mRNA sequence

ATGAAGACGAGAACTGAGGGAGCCCCGCTGGCAACCCTCTCCATTTCAAATCAAGCATCGCCCGAGCACACACCGGAGCTTGCCTACCCGCCGATTGTAGCCCCAGCAGTGTTGACGTTGGACTGTGAAGCCAGAGTCCGTGAACCCACGTATGTCGTCGATGTCCGAACGCCATATCCGCTGCAATTTGCTGTTGGATTACGAGCGGCCTTCCGAGTCCATTTTAGATTTAGGAGTTGGAGGGAGGCATTACGTCGAGTTTGCAGCCTGCAGGGAGAGAAGGGCGACGGCCATGGCTTTCAGTTTCAGTCGTCCAATACTTTGCTTGCAGTTGCAACCCCGATCCCAAACCACAACCTACGCTTCTCTCTCACTCTGCTCATAACCCTTCATTCCGCTATTTCAAGCTCCACATACTCTGATTCTGCGCCGTGA

Coding sequence (CDS)

ATGAAGACGAGAACTGAGGGAGCCCCGCTGGCAACCCTCTCCATTTCAAATCAAGCATCGCCCGAGCACACACCGGAGCTTGCCTACCCGCCGATTGTAGCCCCAGCAGTGTTGACGTTGGACTGTGAAGCCAGAGTCCGTGAACCCACGTATGTCGTCGATGTCCGAACGCCATATCCGCTGCAATTTGCTGTTGGATTACGAGCGGCCTTCCGAGTCCATTTTAGATTTAGGAGTTGGAGGGAGGCATTACGTCGAGTTTGCAGCCTGCAGGGAGAGAAGGGCGACGGCCATGGCTTTCAGTTTCAGTCGTCCAATACTTTGCTTGCAGTTGCAACCCCGATCCCAAACCACAACCTACGCTTCTCTCTCACTCTGCTCATAACCCTTCATTCCGCTATTTCAAGCTCCACATACTCTGATTCTGCGCCGTGA

Protein sequence

MKTRTEGAPLATLSISNQASPEHTPELAYPPIVAPAVLTLDCEARVREPTYVVDVRTPYPLQFAVGLRAAFRVHFRFRSWREALRRVCSLQGEKGDGHGFQFQSSNTLLAVATPIPNHNLRFSLTLLITLHSAISSSTYSDSAP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G025580.1CaUC01G025580.1mRNA