CaUC01G024830 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G024830
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	40S ribosomal protein S25
Location	Ciama_Chr01: 36807820 .. 36808212 (-)
RNA-Seq Expression	CaUC01G024830
Synteny	CaUC01G024830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTACAAACCCCCAAAAGGAAGAGAAGAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

mRNA sequence

ATGCAACTACAAACCCCCAAAAGGAAGAGAAGAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

Coding sequence (CDS)

ATGCAACTACAAACCCCCAAAAGGAAGAGAAGAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

Protein sequence

MQLQTPKRKRRAYKKLNSAYSIRICSLSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARKEQSRI

Homology

[Close]

BLAST of CaUC01G024830 vs. NCBI nr
Match: KAG6573888.1 (40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37
Identity = 87/99 (87.88%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 27  LSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM 86
           + S+  + Q   LRR NFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM
Sbjct: 55  IQSIFGIIQLGTLRRRNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM 114

Query: 87  VLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK 126
           VLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Sbjct: 115 VLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARR 153

[Close]

BLAST of CaUC01G024830 vs. NCBI nr
Match: CBI32218.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 154.5 bits (389), Expect = 6.5e-34
Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 32  HLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ 91
           HLP + +  R +F  MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ
Sbjct: 30  HLPPFSETPRSDF-VMAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ 89

Query: 92  GTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK 126
           GTYDKLL+EVPKYKL+TPSILSDRLR+NGSLAR+
Sbjct: 90  GTYDKLLLEVPKYKLITPSILSDRLRVNGSLARQ 122

[Close]

BLAST of CaUC01G024830 vs. NCBI nr
Match: XP_022961406.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S ribosomal protein S25-2-like [Cucurbita maxima] >XP_023545343.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG6590412.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023962.1 40S ribosomal protein S25-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. NCBI nr
Match: XP_022945101.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S ribosomal protein S25-2 [Cucurbita maxima] >XP_023541368.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG7012952.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. NCBI nr
Match: XP_016900931.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S ribosomal protein S25-2 [Benincasa hispida] >TYK10188.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 142.1 bits (357), Expect = 4.4e-33
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-33
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLAR+
Sbjct: 61  ITPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-33
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPS+LSDRLRI+GSLARK
Sbjct: 61  ITPSVLSDRLRISGSLARK 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL
Match: A0A6J1HUK6 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL
Match: A0A6J1HZE7 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467614 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL
Match: A0A5D3CG38 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003330 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL
Match: A0A6J1HAA0 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111461987 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL
Match: A0A6J1FZX1 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111449439 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.2e-35
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLAR+
Sbjct: 61  ITPSILSDRLRINGSLARR 79

[Close]

BLAST of CaUC01G024830 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 78

[Close]

BLAST of CaUC01G024830 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 78

The following BLAST results are available for this feature:

BLAST of CaUC01G024830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573888.1	1.6e-37	87.88	40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
CBI32218.3	6.5e-34	84.04	unnamed protein product, partial [Vitis vinifera]	[more]
XP_022961406.1	5.5e-33	98.73	40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S riboso...	[more]
XP_022945101.1	5.5e-33	98.73	40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S riboso...	[more]
XP_016900931.1	5.5e-33	98.73	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S r...	[more]

BLAST of CaUC01G024830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIK2	1.1e-33	91.14	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
Q9SIW5	4.4e-33	91.14	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]
Q8GYL5	5.7e-33	91.14	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
Q9T029	5.7e-33	89.87	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
P46301	1.1e-31	88.61	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]

BLAST of CaUC01G024830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUK6	2.7e-33	98.73	40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1	[more]
A0A6J1HZE7	2.7e-33	98.73	40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467614 PE=3 SV=1	[more]
A0A5D3CG38	2.7e-33	98.73	40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1HAA0	2.7e-33	98.73	40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111461987 PE=3 SV=...	[more]
A0A6J1FZX1	2.7e-33	98.73	40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111449439 PE=3 SV=...	[more]

BLAST of CaUC01G024830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21580.1	8.2e-35	91.14	Ribosomal protein S25 family protein	[more]
AT4G39200.1	4.0e-34	89.87	Ribosomal protein S25 family protein	[more]
AT4G34555.1	4.0e-34	91.14	Ribosomal protein S25 family protein	[more]
AT2G21580.2	4.5e-33	89.87	Ribosomal protein S25 family protein	[more]
AT4G39200.2	2.2e-32	88.61	Ribosomal protein S25 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.63.20		coord: 67..126 e-value: 5.7E-26 score: 92.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..81
None	No IPR available	PANTHER	PTHR12850:SF31	BNAA04G12260D PROTEIN	coord: 29..125
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 53..125 e-value: 4.0E-29 score: 100.8
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	40S RIBOSOMAL PROTEIN S25	coord: 29..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G024830.1	CaUC01G024830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome