CaUC01G024820 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G024820
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DNA-damage-repair/toleration protein DRT111, chloroplastic
Location	Ciama_Chr01: 36804421 .. 36811535 (+)
RNA-Seq Expression	CaUC01G024820
Synteny	CaUC01G024820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTTTCCAAAATTAGGTCATTTGCATTTTAGACCTTTAAAATAGGTCTTTTATATGATTATTCAGTTTTTTTGTGAGGTCTCGGTGGTTTTTGAGGATCCTCGGTAGGCTTGGCAATGTTTCTTTCCACTTATCACTGTCACTCAAATCCCTAATTCCGAGTACTCGTAAAGTTTGCAAATTTTGCCGACCACCGTGAACTGGAAAACTCCTTCTTCGATTCTGTTTCCAACTTGAAATTTCCGATGTTTTAGAGATTCCGAGGAGAGAAGACATAGCTACGCATACGATATGCTCGGTGGATTGTACGGGGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGACAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTTCGCAAGCCATCGTCCGTCTTTGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACTTCGACGCACCCCAAGGTTTCGGTGTCAGCGCCGGTGGAGCCGTCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCTACGGTCATAGAAGAGTATGATCCAGCGAGGCCGAATGATTACGAGGAGTATAGAGTAGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAAGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGACAATATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCGAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGACTTGGGAAGCAAGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACAGACTTGCGTGCTGGAGTAATTGTAAACGCTAATGATACGAAATCAGAGAAGAAGTTGAAGAGTGTTAACTTCAACGGACTACCTACTCGGGTTCTTCTGCTCAGAAACATGGTACGGTAATGTAGAATCCTGACAATTTGTTGATTTGAAATGAATTTTAGGTAGCAGAGTTTGTTCTCGGGGCATTACAATCCGAGTAGTTCTTTCTCGTTGCTCAGAAATTTAGTAATTCTTAGTTAGATTGGAGCTATATGGACAGCTTTACCATAACCGATCATATAATTTTCTCATCCTTCAAGCTAAATTTGCTGCGAACACCAGTACTAGCTCGGGATTCTTCTTTTAATCCAACATTAAAATGCATCCACTTGATTTTTTTTTTTTTTTTTGATAAAAAGACTATTATTATCCATAATTTGATGGAAGTTCGATTCCTAACCTTGGTATCCCTAGCTGATTGCCCATTGGTATGGGGTGATCTAGTTGCAATGTTAGACCACTACGGTGAATGGATTGTTAGTTAGGCAGTAAGGTTGTTGTCAGCCGCATCTGCACCCGCTTTAGCATCTTCATCAGCTAATTGCTCAACCAGTTTCCGTAAAAGTCCCTTTTGTCCGGAAGGTTTCTTTCACTGTAAAAGGACTACGAGCAATAATCAGAGGGAATGGGATATGTACTAAGAATTCCATAGTTGGATATAGAGTTCTTTTTGTGTGGAAAATTGTAGAGGGAAAGCAATAAATCACAAGATTATTAGTCCATGTGAAAATAAATTTAAAAGCAGAGAGCGTACAAAACCTGAAGCGAAACTTACCCTTTTACTCATTTGGTCCTATATAGAATGGTGCCCTCATCAATATTACATATTGCCAGTTCATTTTAGGTTTTAAGTATTTTTATACTTTTATTTTGCCTTCAGAATAGAGTCCCATATCAGAGATTAGAAATTTAGAGAAGGGGGAAGAATGGAGGTCATGTCAATATAGGATATTCTTAGGGGCTGTATGGACACCAAGGTATTACATATTTGGTTAAAGTCTCATGTTTTTGTAATTTGATTCATTGTTGCATTAGGTTGACGATCATCATATTGGTTGGGTCTAAAGTGTGAGTCAATGGCGTTGCTTGAAATATGTGGAAAGCTATTTGTATTTGTTTGCCCTTTATTATTTCATTTTTTCTTATTGAAAGTAATTGTTTCTACAAAAAAAAAAAAAAAAAAAGTGGAGCTATTTCTAGAGTGTTTAGAGAGTTGGATCAGGAGCCTAAGGACGTTTAGATCCTTATTAGGTTTCTTGTTTCTATTCAAGCTTCAAAATTTGAAACTTTTCTGTAACTATTCTATAGGCACTGCCGCGCCATTTTGCTCGATTGGTTCCCTTTTCTTTAGAGGTGCCATTTTTTTGTGGGCTTGTTTTTTTTTTTTCATGTCTTTGTATTCTTTTATTTTGTTTTCTCAATTTAAATGGTTGTCTTACAAAAAGAAAAAGGGTTTTTCTCATTTCCCCAATCTGTTACTTTTCCTATTGGACATGTGAATAATATTTGAAGGTCAATGTTTTCCGTTAAATGCTTCTATCTTGTCTCTTTAATGTGGTACCATGTCTTTCATTTTCAGAGCCCCCTCTCCTATATGCATCATTGGATACTCTTCAAAGATTGAAATGCTAATGATTGGGCTTACCTTCTAGCTTTTATCAAGGGTGTGAGTTTAATCTCTCGGTTTTGGGGATCTTTTGATCTGCTTACTAGATCTTTCTGGTTTCTTTTCTTGTAACTCATTTTTGCTTCATTTACTTGCAACAATTGCAAAGTCTCGAGCCCTCTTTATGCCAAGTCTTGAAAGTCTAACATTTAAGAGAGGCTTAAGATTTCTCTCTTCCATTGTCTCTTTTGGTTGTGGCCCATGTTGATGTGTTGTGGGCACCTTGGCATTGGAGGATTTGAGTCACATTCTTTCGTCAAGTAGGCACTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATAAATATAAAAATAGTGATTAACAAGAAAGATATCACAAGTCAAAAATTGCAAAATTATAGCATCCATGTGAAGGAGACATTGAAACCAAAAAGCAAAAACTAGAGAGTAAGGAGGCTAATTCATGGCAACTCAAAAGATAATAATAAAGGGATATTAGGTATTGGTATTGGTAGCCCTTGGGTAGATCTCCTGGCTAGCATGTGCAGAGACCATTCTGATGAGACCTTGGCCATCAAATCCTTGATTGCTCTTTTCGTGCAAGAGATCCATTGATCCTCAACCTATCGGACAAGATTGATGGAGTGACAAGCTTGTACTTGGGAACTTCAACGAGAAGCTTGTCATAAGTTCCTTGATCAAACAAAACCATGTTGTTGACCTTCTCCTTTTGCTTTCCTTTGCTCCACTTCTTCTTCTTCTGCTTTCCTCCACCAGATTTAGCAGGCTTGGAAGATGGGGGAGGAGCCTTATCCTTCTTTGGCGCCATTGTATCAAAGTTGCACCGCCGGAGTTGGATGTACTGAGGAAGATGCAGAAGAGAAGAGAGGGAGCAAATGCGGATCGAGTATGCACTGTTAAGCTTCTTGTAGGCTCTTCTCTTCCTTTTGGGGGTTTGTAGTTGCATTTTGTTCTTTCTTTTTATTTCTTGATGAAAAATCAGTTTCTTGTTAAAAAGAAAATATTATGTGGTTATGATGATGGAGGAGGTTTTCTGCATCCTTTATTTAAACAGGGGGGAAGTTCTTTGGTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCACAGTCACATTGGGGTTTATGGTTTAAGAAGAGGAGGAAGATTTTTAGAGTGCTAAGGGTTCTCGAAAGAAGGTCGGGAGCACTAGCACATAGCACTACAGAATCTAAAAGGTGATGCCCCAAGCGGAAAAAAGCTGACAATTTCCTGTGGGAAAACGAGGGAGAAATTCTTAGCTGTTTGGCCAACTGGAATATTGCTAATGTCCACTAGAAAATGGAAGGTTGGAATTAGACAACTTAAGGAAGAGAAGCGAGGCAACAGCGCTAAGAAGCTCTGGAGATATCTTAGAGAACAAATACGGACATGAAGAAGAAGGAAAATAGGCAGTTTCCTCCAGCAAGGCAATTTGGTTGTTTTCAAAACGCTTGTGTGGTGACCCTGTCAAAGTCTGAGCAAAAAAGTTGGGAAGCGTAGAAATAACTTCTTTCTAGGCTGATATTTGGATAATTACTGGTTATGTCATAGCTTTCCTCAAGTTTCATTGGTTCTTTCTGGTTATATGCCAAACCAATGATTTTGGCCGGAAAAAGTCTAACTGAGGAAATAGAGGAGGCAAGAGGCCTGTTCAAACTCTAGATGATCTACAAACTTGTGGCACGGAGGACAAAAGGATTTGGAGAATAAATCCTTCAGTCCTATTGTTAGTAAAATTACTGGTAAAAGAGCTCATTAGATCATAGACTGGAAAAAGAAGGCAAGCCATTGTTTAGGGATTATGAACTCTTAGAATTCAAAGATTCTTAGGAAAAGAGCATACAAGTTCCAAATAAATAGGGTTTAGGGTTTAGAGTTTGGTTTATCAGAATTGCATAATTCTTGTTCTAACCATGCGTCCTCCGTCTTTTTTTTTTTTTCTTTTTCATCTTTACTTTCTTCAATTGCCTTATTCCCAAATTTTACTTGTAAGCTTGTAATAACCAAAGCATCTTTGATCGCAAAAGCATGTTTTTTTTTGGGGGTTAGTGGCATGCATACATTTTGATTGATAACTAGGCCCCATTTCTTCGGTGGTTTTCATATTTGTTAAGGAAACATTTGAATTCTTAGCTAAATTTTAAAAACAAAAACAAGATTTTAAAAACTATTTTTTTTTAGTTTCAAAAAACTTGTTAATTGTATATCCTTTTTGTGAATTTCATATACCAACAAATTTGTTCCTTAAAAGAAAAAAAAAAAAAACTGAGTGTTTATTTGAGAGGTGTGAAAACAAAACCATTCTAAAGAGCAAATACATAGTGAGCAAACAAGCATAAATTGAAAAAATAGGAAACTAGAAACGAAACCGTTATCAAATGGGACCTAAATGTTTTGGGTGTGATACTATTAGGGTTTAATGAGGTTAGTTGGTAAATAGGTACTGGGTAGTACTACTAGAGTATATCAGAAGCTGTTATTTTCTATATTCTATTTTGTAAACCTCCATTTTGCCTATGAGTTTCATGTAGCTTTTTATTTGATCATAGAGGTTATTTGAACACCTTATGTGAGAATATTTACTCGTGTGAAAGACCACTATTTGTAAATTGCATGTGGAGTTTCATGACAATGGTATGACGGGTCGTGTAAATATAGTAGAAAAAACAATATATATTTCAGATTATCACTTAACCTAAGAATCTTTCCATTAACGAATAATAAAAGACGTTGGCCGATCATTTTGAGGCCGCAAATTTAAAGGCTTCTCAATGATGCTCTCATTCCAAAATATTTACTGGGTTTTCTTTATAGGATATTTATTTGAGTTTGGCAAGCTTTTATTTTCTTAGTTTTTTACTTCTTTCCCTTTTGAAGTTTGTATTTTTGAAAAATGGTCTAGAAAGAAAAAAAAAGAAGAAGACACTATCGATTAAGGGAGGGATTCATCATTATGTTAAAAAAGGTATCAACTTGTAGGGTTATTTCTTTAAAACTCAGGATCAATTTCAGTTTTGATAGATCGGATCACATTCAAGTATAGCATGAAGCATCTTTTGTAAGACCAGCGAACAGTTTCATCTTTGAGGATATCTCAATGATCAAGCTTTTGATGAATGAAGCGTCTTTTATATTTATAGAAAGTTCAGCATTTTTCTTCAGACGTCTAAAGCATCTGCATTTGTGATTTTTCCTGATGAGAATAATGAGAATGGCTGCCTTGTTTGATTTTTCTTGAAGGTGGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGGACAGTAACACGGGTTCTGATATTCGAGATTACAGAACCCAATTTTCCAGTGGATGAGGCTGTTCGAATATTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGATACTTCGGTGGAAGAGTGGTTCGAGCCACATTTTATGACGAGGAAAGGTTCAGCAAGAATGAATTAGCTCCAATGCCAGGAGAAGTCCCTGGATTTACATGAAATCCAAGAAGTAAAAAGATACGCCAGACATACGCATTCTTGGTTGATGAAGCTATGATTAATTTGGATTGGATTGTGCAATAACTTTCCTGTTGTAAAGAGATTTTCCCATGGTGTTGTTGACTCAATGAAGCCCAAGAATGGAATTGTTGAACTTGAAATGTTCTTATTAACTAGTGCAGATTGTTCTTCTAGTCAAATGGTTGCTTTAAGCATATTTACCTGCTCTTGTTAATTGAACAGAAGTTTCTTATTGGATTTCGTCGACAAATGGCCAAAAACTGGCTTTCGTTGCAGTCGTAATGAGATTCTCTTTTTCTTGGGACGGACTGAATGATGGTGCACCTGGGCAAGGGACATTAACCATCCAAGATAAACCTTTGATGAGTTCGTCGTTCTGTTATAGAGAATATATATATTATATATATTAATTGTTAATTGTTTATTGTTTGCGTTTTGTATTCATACTTCTGCTAATTAACAAAAGCTTGGCAAGTTTACCTTATTTGCTTTCTCCCAGATTCAACGATGTCTTGATCGAATAGTTTCAACCAAGATTGTAGTCTGATTTTATTGGTACAATGAGAGACTAACAGCAGCTCTACTTGCATGCACAGCACATTGATGAAGGTGGGCGTTCTTTTGGGCTGCAAGTGGATTATCATTGGGCTTTTACTGTAATTTTAGGTGAAGTACAAGACTTGTGTTATT

mRNA sequence

ATTTGTTTCCAAAATTAGGTCATTTGCATTTTAGACCTTTAAAATAGGTCTTTTATATGATTATTCAGTTTTTTTGTGAGGTCTCGGTGGTTTTTGAGGATCCTCGGTAGGCTTGGCAATGTTTCTTTCCACTTATCACTGTCACTCAAATCCCTAATTCCGAGTACTCGTAAAGTTTGCAAATTTTGCCGACCACCGTGAACTGGAAAACTCCTTCTTCGATTCTGTTTCCAACTTGAAATTTCCGATGTTTTAGAGATTCCGAGGAGAGAAGACATAGCTACGCATACGATATGCTCGGTGGATTGTACGGGGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGACAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTTCGCAAGCCATCGTCCGTCTTTGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACTTCGACGCACCCCAAGGTTTCGGTGTCAGCGCCGGTGGAGCCGTCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCTACGGTCATAGAAGAGTATGATCCAGCGAGGCCGAATGATTACGAGGAGTATAGAGTAGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAAGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGACAATATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCGAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGACTTGGGAAGCAAGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACAGACTTGCGTGCTGGAGTAATTGTAAACGCTAATGATACGAAATCAGAGAAGAAGTTGAAGAGTGTTAACTTCAACGGACTACCTACTCGGGTTCTTCTGCTCAGAAACATGACTATTATTATCCATAATTTGATGGAAGTTCGATTCCTAACCTTGGTATCCCTAGCTGATTGCCCATTGGTATGGGGTGATCTAGTTGCAATGTTAGACCACTACGGTGAATGGATTAGTCCCATATCAGAGATTAGAAATTTAGAGAAGGGGGAAGAATGGAGGTCATGTCAATATAGGATATTCTTAGGGGCTGTATGGACACCAAGATTTAGCAGGCTTGGAAGATGGGGGAGGAGCCTTATCCTTCTTTGGCGCCATTGTATCAAAGTTGCACCGCCGGAGTTGGATGTACTGAGGAAGATGCAGAAGAGAAGAGAGGGAGCAAATGCGGATCGAACGTCTAAAGCATCTGCATTTGTGATTTTTCCTGATGAGAATAATGAGAATGGCTGCCTTGTGGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGGACAGTAACACGGGTTCTGATATTCGAGATTACAGAACCCAATTTTCCAGTGGATGAGGCTGTTCGAATATTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGATACTTCGGTGGAAGAGTGGTTCGAGCCACATTTTATGACGAGGAAAGGTTCAGCAAGAATGAATTAGCTCCAATGCCAGGAGAAGTGAAGTACAAGACTTGTGTTATT

Coding sequence (CDS)

ATGCTCGGTGGATTGTACGGGGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGACAAGCCCACCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTTCGCAAGCCATCGTCCGTCTTTGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATAAAAGCCGCCACTTCGACGCACCCCAAGGTTTCGGTGTCAGCGCCGGTGGAGCCGTCTCAGCCGATTCTGGCTGAGGCCATTACGCAACCGGCATTGGTGGCCGTGACGTCTACGGTCATAGAAGAGTATGATCCAGCGAGGCCGAATGATTACGAGGAGTATAGAGTAGAGAAGAAGAGGAAGGCCATGGAGGCTGAGATGAGGAAGGAGCTTGAGAGACGTAGACAAGAAGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGAAAGACAATATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCGAGATCGCCATCTCCACCAAGTAGCGTAGACGGCTTCAGCATTGGAAAGTCGGAGACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCACAAAGAATGATGGCTAAGATGGGGTGGAAAGAGGGGCAAGGACTTGGGAAGCAAGAACAAGGGATTACCACCCCTCTGATGGCAAAAAAGACAGACTTGCGTGCTGGAGTAATTGTAAACGCTAATGATACGAAATCAGAGAAGAAGTTGAAGAGTGTTAACTTCAACGGACTACCTACTCGGGTTCTTCTGCTCAGAAACATGACTATTATTATCCATAATTTGATGGAAGTTCGATTCCTAACCTTGGTATCCCTAGCTGATTGCCCATTGGTATGGGGTGATCTAGTTGCAATGTTAGACCACTACGGTGAATGGATTAGTCCCATATCAGAGATTAGAAATTTAGAGAAGGGGGAAGAATGGAGGTCATGTCAATATAGGATATTCTTAGGGGCTGTATGGACACCAAGATTTAGCAGGCTTGGAAGATGGGGGAGGAGCCTTATCCTTCTTTGGCGCCATTGTATCAAAGTTGCACCGCCGGAGTTGGATGTACTGAGGAAGATGCAGAAGAGAAGAGAGGGAGCAAATGCGGATCGAACGTCTAAAGCATCTGCATTTGTGATTTTTCCTGATGAGAATAATGAGAATGGCTGCCTTGTGGGCCCGGGTGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCAGAGTGTGCAAAGTATGGGACAGTAACACGGGTTCTGATATTCGAGATTACAGAACCCAATTTTCCAGTGGATGAGGCTGTTCGAATATTTGTGCAGTTTGAAAGATCAGAAGAAACGACGAAGGCTTTGGTTGATCTTGATGGTCGATACTTCGGTGGAAGAGTGGTTCGAGCCACATTTTATGACGAGGAAAGGTTCAGCAAGAATGAATTAGCTCCAATGCCAGGAGAAGTGAAGTACAAGACTTGTGTTATT

Protein sequence

MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAATSTHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWGDLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWRHCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEVKYKTCVI

Homology

[Close]

BLAST of CaUC01G024820 vs. NCBI nr
Match: XP_038882071.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 2.5e-174
Identity = 362/501 (72.26%), Postives = 365/501 (72.85%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK SVSAPVEPSQPILAE I QPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKASVSAPVEPSQPILAEVIAQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER+YSDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVNFNGLPTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDE+RFSKNELAPMPGEV
Sbjct: 481 ATFYDEDRFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. NCBI nr
Match: XP_004134609.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis sativus] >KGN49456.1 hypothetical protein Csa_003083 [Cucumis sativus])

HSP 1 Score: 619.0 bits (1595), Expect = 3.6e-173
Identity = 361/501 (72.06%), Postives = 365/501 (72.85%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPKVSVS  VE SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER++SDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVNFNGLPTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. NCBI nr
Match: XP_008439555.1 (PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis melo])

HSP 1 Score: 612.5 bits (1578), Expect = 3.4e-171
Identity = 358/501 (71.46%), Postives = 362/501 (72.26%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQ+KIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
            THPK SVS  VE SQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  LTHPKASVSTQVEASQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKER+ERER++SDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKERDEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK KSVNFNGLPTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. NCBI nr
Match: XP_023003194.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 612.1 bits (1577), Expect = 4.4e-171
Identity = 355/501 (70.86%), Postives = 362/501 (72.26%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK SVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKASVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER+YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVN NGLPTRVL+LRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERF KNELAPMPGEV
Sbjct: 481 ATFYDEERFGKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. NCBI nr
Match: XP_022146691.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia])

HSP 1 Score: 608.6 bits (1568), Expect = 4.9e-170
Identity = 353/501 (70.46%), Postives = 361/501 (72.06%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSK+KAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKVKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK S SA VE SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYR+EKKRKAME
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERERDYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVNFNG PTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot
Match: P42698 (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT111 PE=1 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 3.3e-121
Identity = 284/525 (54.10%), Postives = 316/525 (60.19%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K     
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNK----- 60

Query: 61  STHPKVSVSAPVEP------SQPILAEA-----ITQPALVAVTSTVIEEYDPARPNDYEE 120
              PK  VSAP +P      SQ +L  A       QPALV VTS+VIEEYDPARPNDYEE
Sbjct: 61  ---PKPIVSAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEE 120

Query: 121 YRVEKKRKAMEAEMRKELERRRQEEEEREKKERE----ERERQYSD-SRINISGEEAWRR 180
           Y+ EKKRKA EAEM++E+++RRQE+EER+K+ERE    ERER  SD SR+NISGEEAW+R
Sbjct: 121 YKREKKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKR 180

Query: 181 RAAK----SGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQG 240
           RAA     SG   RS SPP +VDGFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQG
Sbjct: 181 RAAMSGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQG 240

Query: 241 LGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKLKSVNFNGLPTRVLLLRNMTI 300
           LGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K +KSVN NG PTRVLLLRNM  
Sbjct: 241 LGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNM-- 300

Query: 301 IIHNLMEVRFLTLVSLADCPLVWGDLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIF 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 LGAVWTPRFSRLGRWGRSLILLWRHCIKVAPPELDVLRKMQKRREGANADRTSKASAFVI 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 384

Query: 421 FPDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 480
                      VGPG+VDDELE+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF
Sbjct: 421 -----------VGPGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQF 384

Query: 481 ERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEV 502
            R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PGE+
Sbjct: 481 SRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPGEI 384

[Close]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot
Match: Q96I25 (Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-18
Identity = 146/546 (26.74%), Postives = 202/546 (37.00%), Query Frame = 0


Query: 5   LYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFA--------PQTVLRSQSKI 64
           LY DL       E   + +  WS + K+    L+   +             TVL     +
Sbjct: 3   LYDDL-----GVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 62

Query: 65  KAATSTHPKVSVSAPVEPSQPILAEAITQP-----ALVAVTSTVIEEYDPARPNDYEEYR 124
           K   S+  +  V  P     P +A  +  P     +   V   + +EYDP  PNDYE+  
Sbjct: 63  KRGGSSDDRQIVDTP-----PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKV- 122

Query: 125 VEKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----RERQYSDSRINISGEEAWRRRA 184
              KR+  E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+
Sbjct: 123 --VKRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRS 182

Query: 185 AKSGAI------------------------PRSPS-----PPSSVDGFSIGKSETG---G 244
               AI                        PRS S     PP   +     +S TG    
Sbjct: 183 MGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNS 242

Query: 245 LGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEK 304
                GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ + 
Sbjct: 243 FLANMGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDA 302

Query: 305 KLKS-----VNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWGDLVAMLDHY 364
             KS           PT+V+LLRNM                                   
Sbjct: 303 SKKSDSNPLTEILKCPTKVVLLRNM----------------------------------- 362

Query: 365 GEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWRHCIKVAPPE 424
                                                                       
Sbjct: 363 ------------------------------------------------------------ 398

Query: 425 LDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEEVGSECAKYG 484
                                                 VG GEVD++LE E   EC KYG
Sbjct: 423 --------------------------------------VGAGEVDEDLEVETKEECEKYG 398

Query: 485 TVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF 496
            V + +IFEI  P  P DEAVRIF++FER E   KA+VDL+GRYFGGRVV+A FY+ ++F
Sbjct: 483 KVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 398

[Close]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot
Match: Q8JZX4 (Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-17
Identity = 143/507 (28.21%), Postives = 193/507 (38.07%), Query Frame = 0


Query: 39  KPSSVFAPQTVLR----SQSKIKAATSTHPKVSVSAPVEPSQPILAEAITQPALVAVTST 98
           K S+V AP   L+    S  +  A T  H    +  PV PS     E +   A       
Sbjct: 46  KQSTVLAPVIDLKRGGSSDDRQIADTPPHVAAGLKDPV-PSGFSAGEVLIPLA------- 105

Query: 99  VIEEYDPARPNDYEEYRVEKKRKAMEAEMRKELERRRQ-EEEEREKKEREE----RERQY 158
             +EYDP  PNDYE+     KR+  E + ++ELER+++ EE E+ +K+R E      R  
Sbjct: 106 --DEYDPMFPNDYEKV---VKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPD 165

Query: 159 SDSRINISGEEAWRRRAAKSGAI------------------------PRSPS-----PPS 218
            DS  +   E   R+R+    AI                        PRS S     PP 
Sbjct: 166 PDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPP 225

Query: 219 SVDGFSIGKSETG---GLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKT 278
             +     +S TG         GG  T A ++M K G++EGQGLGK EQG++T L  +KT
Sbjct: 226 VYEEPDRPRSPTGPSNSFLANMGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKT 285

Query: 279 DLRAGVIVNANDT---KSEKKLKSVNFNGL------PTRVLLLRNMTIIIHNLMEVRFLT 338
             R G I+  + T   +++   K  + N L      PT+V+LLRNM              
Sbjct: 286 SKRGGKIIVGDATEKGEAQDASKKSDSNPLTEILKCPTKVVLLRNM-------------- 345

Query: 339 LVSLADCPLVWGDLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRL 398
                                                                       
Sbjct: 346 ------------------------------------------------------------ 402

Query: 399 GRWGRSLILLWRHCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLV 458
                                                                      V
Sbjct: 406 -----------------------------------------------------------V 402

Query: 459 GPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVD 496
           G GEVD++LE E   EC KYG V + +IFEI  P  P DEAVRIF++FER E   KA+VD
Sbjct: 466 GAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVD 402

[Close]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot
Match: Q2HJG2 (Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.7e-14
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 407 LVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFERSEETTKA 466
           +V P ++DD+LE EV  EC K+G V RV+I++  +      +  V+IFV+F  + ET KA
Sbjct: 440 MVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSVASETHKA 499

Query: 467 LVDLDGRYFGGRVVRATFYDEERFSKNELA 496
           + DL+GR+F GR V A  YD+ERF  ++L+
Sbjct: 500 IQDLNGRWFAGRKVVAEVYDQERFDNSDLS 529

[Close]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot
Match: Q3UEB3 (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 2.7e-14
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 407 LVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFERSEETTKA 466
           +V P ++DD+LE EV  EC K+G V RV+I++  +      +  V+IFV+F  + ET KA
Sbjct: 474 MVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKA 533

Query: 467 LVDLDGRYFGGRVVRATFYDEERFSKNELA 496
           +  L+GR+FGGR V A  YD+ERF  ++L+
Sbjct: 534 IQALNGRWFGGRKVVAEVYDQERFDNSDLS 563

[Close]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL
Match: A0A0A0KP45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.8e-173
Identity = 361/501 (72.06%), Postives = 365/501 (72.85%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPKVSVS  VE SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER++SDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVNFNGLPTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL
Match: A0A1S3AYL8 (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484318 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 1.6e-171
Identity = 358/501 (71.46%), Postives = 362/501 (72.26%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQ+KIKAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQNKIKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
            THPK SVS  VE SQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  LTHPKASVSTQVEASQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKER+ERER++SDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKERDEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK KSVNFNGLPTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKAKSVNFNGLPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL
Match: A0A6J1KSL4 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496883 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 2.1e-171
Identity = 355/501 (70.86%), Postives = 362/501 (72.26%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK SVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKASVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER+YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVN NGLPTRVL+LRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERF KNELAPMPGEV
Sbjct: 481 ATFYDEERFGKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL
Match: A0A6J1D044 (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015835 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 2.4e-170
Identity = 353/501 (70.46%), Postives = 361/501 (72.06%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSK+KAAT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKVKAAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK S SA VE SQPILAEAITQPALVAVTSTV+EEYDPARPNDYEEYR+EKKRKAME
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERERDYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVNFNG PTRVLLLRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 368

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 368

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERFSKNELAPMPGEV
Sbjct: 481 ATFYDEERFSKNELAPMPGEV 368

[Close]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL
Match: A0A6J1ELY8 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433765 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 1.4e-167
Identity = 350/501 (69.86%), Postives = 358/501 (71.46%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K AT
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60

Query: 61  STHPKVSVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120
           STHPK S    VEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME
Sbjct: 61  STHPKAS----VEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERERQYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERER+YSDSR+NISGEEAWRRRAAKSGA+PRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAVPRSPSPPS 180

Query: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKLKSVNFNGLPTRVLLLRNMTIIIHNLMEVRFLTLVSLADCPLVWG 300
           AGVIVNANDTKSEKK+KSVN NGLPTRVL+LRNM                          
Sbjct: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNM-------------------------- 300

Query: 301 DLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIFLGAVWTPRFSRLGRWGRSLILLWR 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 HCIKVAPPELDVLRKMQKRREGANADRTSKASAFVIFPDENNENGCLVGPGEVDDELEEE 420
                                                          VGPGEVDDELEEE
Sbjct: 361 -----------------------------------------------VGPGEVDDELEEE 364

Query: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 480
           VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR
Sbjct: 421 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 364

Query: 481 ATFYDEERFSKNELAPMPGEV 502
           ATFYDEERF KNELAPMPGEV
Sbjct: 481 ATFYDEERFGKNELAPMPGEV 364

[Close]

BLAST of CaUC01G024820 vs. TAIR 10
Match: AT1G30480.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 436.8 bits (1122), Expect = 2.4e-122
Identity = 284/525 (54.10%), Postives = 316/525 (60.19%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60
           MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K     
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNK----- 60

Query: 61  STHPKVSVSAPVEP------SQPILAEA-----ITQPALVAVTSTVIEEYDPARPNDYEE 120
              PK  VSAP +P      SQ +L  A       QPALV VTS+VIEEYDPARPNDYEE
Sbjct: 61  ---PKPIVSAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEE 120

Query: 121 YRVEKKRKAMEAEMRKELERRRQEEEEREKKERE----ERERQYSD-SRINISGEEAWRR 180
           Y+ EKKRKA EAEM++E+++RRQE+EER+K+ERE    ERER  SD SR+NISGEEAW+R
Sbjct: 121 YKREKKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKR 180

Query: 181 RAAK----SGAIPRSPSPPSSVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQG 240
           RAA     SG   RS SPP +VDGFSIGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQG
Sbjct: 181 RAAMSGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQG 240

Query: 241 LGKQEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKLKSVNFNGLPTRVLLLRNMTI 300
           LGK EQGITTPLMAKKTD RAGVIVNA++ KS    +K +KSVN NG PTRVLLLRNM  
Sbjct: 241 LGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNM-- 300

Query: 301 IIHNLMEVRFLTLVSLADCPLVWGDLVAMLDHYGEWISPISEIRNLEKGEEWRSCQYRIF 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 360

Query: 361 LGAVWTPRFSRLGRWGRSLILLWRHCIKVAPPELDVLRKMQKRREGANADRTSKASAFVI 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 384

Query: 421 FPDENNENGCLVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 480
                      VGPG+VDDELE+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF
Sbjct: 421 -----------VGPGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQF 384

Query: 481 ERSEETTKALVDLDGRYFGGRVVRATFYDEERFSKNELAPMPGEV 502
            R EETTKALVDLDGRYFGGR VRATFYDEE+FSKNELAP+PGE+
Sbjct: 481 SRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPGEI 384

[Close]

BLAST of CaUC01G024820 vs. TAIR 10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-05
Identity = 22/78 (28.21%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 416 ELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFG 475
           ++ E++  E  K+G +T V+I   +    PV    ++F+++  ++ +T+A   ++GR FG
Sbjct: 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552

Query: 476 GRVVRATFYDEERFSKNE 494
           G  V A +Y E++F + +
Sbjct: 553 GNEVVAVYYPEDKFEQGD 570

[Close]

BLAST of CaUC01G024820 vs. TAIR 10
Match: AT4G36690.4 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-05
Identity = 22/78 (28.21%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 416 ELEEEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFG 475
           ++ E++  E  K+G +T V+I   +    PV    ++F+++  ++ +T+A   ++GR FG
Sbjct: 471 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 530

Query: 476 GRVVRATFYDEERFSKNE 494
           G  V A +Y E++F + +
Sbjct: 531 GNEVVAVYYPEDKFEQGD 548

The following BLAST results are available for this feature:

BLAST of CaUC01G024820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882071.1	2.5e-174	72.26	DNA-damage-repair/toleration protein DRT111, chloroplastic [Benincasa hispida]	[more]
XP_004134609.1	3.6e-173	72.06	DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis sativus] >KG...	[more]
XP_008439555.1	3.4e-171	71.46	PREDICTED: DNA-damage-repair/toleration protein DRT111, chloroplastic [Cucumis m...	[more]
XP_023003194.1	4.4e-171	70.86	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxim...	[more]
XP_022146691.1	4.9e-170	70.46	DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia]	[more]

BLAST of CaUC01G024820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42698	3.3e-121	54.10	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thalia...	[more]
Q96I25	3.1e-18	26.74	Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1	[more]
Q8JZX4	1.2e-17	28.21	Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1	[more]
Q2HJG2	2.7e-14	44.44	Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1	[more]
Q3UEB3	2.7e-14	44.44	Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=...	[more]

BLAST of CaUC01G024820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP45	1.8e-173	72.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1	[more]
A0A1S3AYL8	1.6e-171	71.46	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A6J1KSL4	2.1e-171	70.86	DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita max...	[more]
A0A6J1D044	2.4e-170	70.46	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Momordica charanti...	[more]
A0A6J1ELY8	1.4e-167	69.86	DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita mos...	[more]

BLAST of CaUC01G024820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30480.1	2.4e-122	54.10	D111/G-patch domain-containing protein	[more]
AT4G36690.1	1.8e-05	28.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.4	1.8e-05	28.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..201
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 200..246 e-value: 1.4E-15 score: 67.8
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 205..244 e-value: 8.1E-17 score: 60.8
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 202..248 score: 15.451051
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 406..482 e-value: 1.6E-22 score: 90.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 405..485 e-value: 1.6E-20 score: 74.9
IPR040052	Splicing factor 45	PIRSF	PIRSF031066	SPF45	coord: 3..275 e-value: 3.8E-62 score: 208.9 coord: 405..501 e-value: 5.9E-49 score: 165.4
IPR040052	Splicing factor 45	PANTHER	PTHR13288	SPLICING FACTOR 45 SPF45	coord: 407..496 coord: 1..275
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 414..486 score: 8.552317
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 409..488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G024820.1	CaUC01G024820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
cellular_component	GO:0009536	plastid
molecular_function	GO:0003676	nucleic acid binding