CaUC01G024650 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G024650
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box protein SKIP19-like
LocationCiama_Chr01: 36606487 .. 36608673 (+)
RNA-Seq ExpressionCaUC01G024650
SyntenyCaUC01G024650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGGACAAACCCTATCATACACGATCCTCATTTCCATTTCGAAACGTCCCTAATTTCTCCAATTTCCTCAGAAATTCAATACACTGTCCAGTCCAATCCATTCCCATCTCATGGAGTCCAACTCCACGATTCAGTCGGAAGCTGAAGTGAGGAACTGGCTTGAACTACCTGCAGAAGTAATGTCTATGATTCTACTGAAGCTTGGCGCCATTGAAATCCTCACCAGCGCTCAAAACGTCTGCTCTTGGCGTAAGATCTATAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTTGGGTGATTCTTATGACATGTATCACGATTTGGAGATCATGTGCAGGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCACTCGGAGGTATCGATTCATTTTACTCTACTGCATCACTTTAGCCTTTCGCAGTATTTTGGGCTGTTTTTATAATCTTGGCGTTCTTCCAAGATTCTTTAGTTCTAGGGCTATAGAGAAATCGGTCTAAAATCTTGTGCAGTTGCTGTGGCAGTTGAAACAATAATTATGTTAGTTCGATGTTGTGGCCATTTAATCTTGAATTTGCAGTATATATTTCATTTTGCAGATGTGTTATTCCATTTTTCTTGTTCCAGTCTTTATGATTTCTGTCGTTCTGTTCTTTTTGTTATTTGCTCATGTGGGTGACAAGTTTAACATGAAGTTGGGAAGTATTGCTCATGTGGGTGACAAGTTTAACATGAAGTTGGGAAGTATTGCTTGATATAAGAGAGAACACCTAAATGCCAGTCTTGGTGCAATTTCTTGTAAAAATACTATTTCTTTCTTTTTTCATCAGGATTGTCAAATATTTCATTAAATTTTCTACCTTGGCACTGAGATTGGAAGTTTAACCCGCATGTGCAATCCTATTTATTTTTCTTTAATCTTGCCTTCCATTTGATAGGGGAAAAAATCACTAGCCAAAATCGAGAGCTGCCCCTTGTAAATCTCTAGGGAGTCAGTTGAGATTCGCTTGGAATTTTTTTTCTTTTTCAAAAGTTTTTTTTGATGGCCTGCCTGTGTGTTTAGAAACATAACTTTTACTGGGGACGTTTTAATTTTATGAGTTTCACATTTCCTTGATTTTGAAGTTTCTCTCTATAAATATTCACTTGTTGCAGTTCAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCGATGAAGTCTCAGACGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGAAATCCTTATCTTTTCATTTGATGTGGACACTTTGAAAACTGTTGGACGGTGTTGCCCTCTTCTGAAGTCGCTGAAACTGGTCGAAGAACAGAGTTGGACAGAACATATGGTGAGTAATGAGGAGGCTCTTGCTATAGCTGAAACTATGCCCAAGTTATGTCACCTTCAGATAATTGGCAATGGCCTAACTAACATAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAATTTAAATTTGGCTGGACAATTGGAAAAAGAATGTGCTGAAAAGGTCAAAGTTTTGTATCTGCCTCACGATCGTGTCACTGATGGCAATGAATGTACTACTAAAACTACCAATTTTGGTGCTCGTGATTCTGAAGATGAAGATTCGACTGATTTCTCGGACATTGATGGTGATTCCTATGATTTCTTAGTAGACGGCAATTTCTTAGATTATGATGACTTCACAAGAATCGATTATTCTGACTATGAGGACTTCACAAGACTCGGTCTCTTTGACGATGATGACTTCCCAGAGCATTATTAACATTTGACATGTTAGATTTGGAAGCATATGTGAGAAAGCCCAGTTTCTACTTCTGTTGAACTTTAAGGTAAGTATGAGAAGTTCTCTTTCCATTACCGTAACTCTAACTACTTTTTTGTATTCTGGGTTTGTCATTTTGATATAAGAGTAACTCTAGGTAGACGCTTGTTGAAATTTAACTGACCATGTGTTAGAATATGTTTGTACTTGAACTATGGACGTATTCCGTATCAAAGGATTGGGTTCAATGTTGGATTTTCTTGTTCCCTTTAATTCGATGATGTGTGTTGGTTCACACAGTTTTGGCCA

mRNA sequence

TAATGGACAAACCCTATCATACACGATCCTCATTTCCATTTCGAAACGTCCCTAATTTCTCCAATTTCCTCAGAAATTCAATACACTGTCCAGTCCAATCCATTCCCATCTCATGGAGTCCAACTCCACGATTCAGTCGGAAGCTGAAGTGAGGAACTGGCTTGAACTACCTGCAGAAGTAATGTCTATGATTCTACTGAAGCTTGGCGCCATTGAAATCCTCACCAGCGCTCAAAACGTCTGCTCTTGGCGTAAGATCTATAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTTGGGTGATTCTTATGACATGTATCACGATTTGGAGATCATGTGCAGGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCACTCGGAGTTCAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCGATGAAGTCTCAGACGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGAAATCCTTATCTTTTCATTTGATGTGGACACTTTGAAAACTGTTGGACGGTGTTGCCCTCTTCTGAAGTCGCTGAAACTGGTCGAAGAACAGAGTTGGACAGAACATATGGTGAGTAATGAGGAGGCTCTTGCTATAGCTGAAACTATGCCCAAGTTATGTCACCTTCAGATAATTGGCAATGGCCTAACTAACATAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAATTTAAATTTGGCTGGACAATTGGAAAAAGAATGTGCTGAAAAGGTCAAAGTTTTGTATCTGCCTCACGATCGTGTCACTGATGGCAATGAATGTACTACTAAAACTACCAATTTTGGTGCTCGTGATTCTGAAGATGAAGATTCGACTGATTTCTCGGACATTGATGGTGATTCCTATGATTTCTTAGTAGACGGCAATTTCTTAGATTATGATGACTTCACAAGAATCGATTATTCTGACTATGAGGACTTCACAAGACTCGGTCTCTTTGACGATGATGACTTCCCAGAGCATTATTAACATTTGACATGTTAGATTTGGAAGCATATGTGAGAAAGCCCAGTTTCTACTTCTGTTGAACTTTAAGGTAAGTATGAGAAGTTCTCTTTCCATTACCGTAACTCTAACTACTTTTTTGTATTCTGGGTTTGTCATTTTGATATAAGAGTAACTCTAGGTAGACGCTTGTTGAAATTTAACTGACCATGTGTTAGAATATGTTTGTACTTGAACTATGGACGTATTCCGTATCAAAGGATTGGGTTCAATGTTGGATTTTCTTGTTCCCTTTAATTCGATGATGTGTGTTGGTTCACACAGTTTTGGCCA

Coding sequence (CDS)

ATGGAGTCCAACTCCACGATTCAGTCGGAAGCTGAAGTGAGGAACTGGCTTGAACTACCTGCAGAAGTAATGTCTATGATTCTACTGAAGCTTGGCGCCATTGAAATCCTCACCAGCGCTCAAAACGTCTGCTCTTGGCGTAAGATCTATAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTTGGGTGATTCTTATGACATGTATCACGATTTGGAGATCATGTGCAGGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCACTCGGAGTTCAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCGATGAAGTCTCAGACGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGAAATCCTTATCTTTTCATTTGATGTGGACACTTTGAAAACTGTTGGACGGTGTTGCCCTCTTCTGAAGTCGCTGAAACTGGTCGAAGAACAGAGTTGGACAGAACATATGGTGAGTAATGAGGAGGCTCTTGCTATAGCTGAAACTATGCCCAAGTTATGTCACCTTCAGATAATTGGCAATGGCCTAACTAACATAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAATTTAAATTTGGCTGGACAATTGGAAAAAGAATGTGCTGAAAAGGTCAAAGTTTTGTATCTGCCTCACGATCGTGTCACTGATGGCAATGAATGTACTACTAAAACTACCAATTTTGGTGCTCGTGATTCTGAAGATGAAGATTCGACTGATTTCTCGGACATTGATGGTGATTCCTATGATTTCTTAGTAGACGGCAATTTCTTAGATTATGATGACTTCACAAGAATCGATTATTCTGACTATGAGGACTTCACAAGACTCGGTCTCTTTGACGATGATGACTTCCCAGAGCATTATTAA

Protein sequence

MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCSWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDIDGDSYDFLVDGNFLDYDDFTRIDYSDYEDFTRLGLFDDDDFPEHY
Homology
BLAST of CaUC01G024650 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida])

HSP 1 Score: 546.2 bits (1406), Expect = 1.9e-151
Identity = 276/331 (83.38%), Postives = 299/331 (90.33%), Query Frame = 0

Query: 1   MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVI 60
           MESNS IQSEAE RNWL+LPAEVMSMILLKLGAIEILTSAQNVC SWRKI KDPLMWRVI
Sbjct: 1   MESNSVIQSEAEARNWLDLPAEVMSMILLKLGAIEILTSAQNVCSSWRKICKDPLMWRVI 60

Query: 61  DMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLA 120
           DM N G+ YDM HDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYIT+SSNQLRRLRLA
Sbjct: 61  DMRNSGNLYDMDHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITQSSNQLRRLRLA 120

Query: 121 DCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHM 180
           DC ++SDEGLTEA+SRLPLLEHLEI I+SFDV+TLKTVGRCCPLLK LKL+EEQ W E M
Sbjct: 121 DCYDISDEGLTEAISRLPLLEHLEIFIYSFDVETLKTVGRCCPLLKWLKLIEEQYWREDM 180

Query: 181 VSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK 240
           V+N+EALAIAETMPKL HLQIIGNGLTN+GLQAILDGCPDLESLDL QCF+LNL GQL K
Sbjct: 181 VTNKEALAIAETMPKLRHLQIIGNGLTNMGLQAILDGCPDLESLDLRQCFHLNLNGQLGK 240

Query: 241 ECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDIDGDSYDFLVDGNFLD 300
           ECAE+ KVL+LPHDR+T+G+ECT KT +FG  DSEDEDS DFS ID D YDFLVD +FLD
Sbjct: 241 ECAERFKVLHLPHDRLTNGHECTNKTIHFGDHDSEDEDSIDFSGIDHDYYDFLVDSDFLD 300

Query: 301 YDDFTRIDYSDYEDFTRLGLFD-DDDFPEHY 330
           YDD TRI+YSDYEDFT+LGLFD DDD  E+Y
Sbjct: 301 YDDSTRINYSDYEDFTKLGLFDHDDDSMEYY 331

BLAST of CaUC01G024650 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 355.5 bits (911), Expect = 4.8e-94
Identity = 198/310 (63.87%), Postives = 233/310 (75.16%), Query Frame = 0

Query: 1   MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVI 60
           MESN    S  E RNWLELPA++ SMILLKLGAIEIL+SAQ+VCS WRKI KDPLMWRV+
Sbjct: 1   MESNPI--SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVV 60

Query: 61  DMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLA 120
           DMHN+G+ +DM +DLE MC  AVDRSCG+LIDINI+YFGT+ELLQYIT+SSNQLRRLR+ 
Sbjct: 61  DMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIV 120

Query: 121 DCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHM 180
            C  ++D GL+EAVS+LPLLEHLEI + SF   TL+TVGRCC LLKSLKL  +      +
Sbjct: 121 RCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMI 180

Query: 181 VSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK 240
             + +A+AIAE MP L +LQI G+ LT+ GLQAILDGCPDLESLDL QCFNL+L GQL  
Sbjct: 181 DCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGV 240

Query: 241 ECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV 300
           ECAE++K L LPHD  TD  E   +T  FG  DS DED  + FSDI     D D Y++  
Sbjct: 241 ECAERIKHLRLPHD-PTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG 300

Query: 301 DGNFLDYDDF 304
             NF DY DF
Sbjct: 301 GSNFSDYADF 306

BLAST of CaUC01G024650 vs. NCBI nr
Match: KAG7034751.1 (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.4 bits (903), Expect = 4.1e-93
Identity = 196/317 (61.83%), Postives = 233/317 (73.50%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FGTD+LLQYIT+SSNQLR+LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

Query: 301 VDGNFLDYDDFTRIDYS 310
              +F DY DF  I+ S
Sbjct: 303 GGSDFSDYTDFVCIEKS 316

BLAST of CaUC01G024650 vs. NCBI nr
Match: KAG6581459.1 (F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.4 bits (890), Expect = 1.3e-91
Identity = 192/310 (61.94%), Postives = 229/310 (73.87%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FGTD+LLQYIT+SSN+LR+LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYINIEHFGTDDLLQYITQSSNELRKLRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEYSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

Query: 301 VDGNFLDYDD 303
              +F DY D
Sbjct: 303 GGSDFSDYTD 309

BLAST of CaUC01G024650 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.7 bits (888), Expect = 2.2e-91
Identity = 192/310 (61.94%), Postives = 228/310 (73.55%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FGTD+LL YIT+SSNQLR+LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYINIEHFGTDDLLHYITQSSNQLRKLRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

Query: 301 VDGNFLDYDD 303
              +F DY D
Sbjct: 303 GGSDFSDYTD 309

BLAST of CaUC01G024650 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-76
Identity = 166/315 (52.70%), Postives = 207/315 (65.71%), Query Frame = 0

Query: 1   MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMW 60
           M S+S+  +  EV    NW ELP E+ S IL +LGAIEIL +AQ VC SWR++ KDP MW
Sbjct: 1   MASSSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMW 60

Query: 61  RVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRL 120
           R IDMHNLGD  DM ++LEIMCRHAVDRS G L+DI I YFGT +LL YI   S+ LR L
Sbjct: 61  RKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSL 120

Query: 121 RLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWT 180
           RL  C +++D+G  EAV +LP LE LE+   SF V++L+ VG+CC  +K+LKL +     
Sbjct: 121 RLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNKH---- 180

Query: 181 EHMVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQ 240
               ++++ALAIAETMPKL HLQ+ GNGL++ GL AILD C +LE LDL +CFN+NL G 
Sbjct: 181 PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGD 240

Query: 241 LEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS----- 300
           L+K C E VKV+  P+D + D               SEDED  DFSDID   GD      
Sbjct: 241 LQKRCFESVKVVRHPNDSIHD----------IDIGSSEDEDPYDFSDIDLMSGDDDFEGY 300

Query: 301 YDFLVDGNFLDYDDF 304
           YDF    +F DYD F
Sbjct: 301 YDFSGASDFSDYDQF 300

BLAST of CaUC01G024650 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-69
Identity = 138/278 (49.64%), Postives = 189/278 (67.99%), Query Frame = 0

Query: 6   TIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNL 65
           ++  + ++RNW ELP+++ S ILL+LGAIEIL +AQ VC  W ++ KDP MWR ID+ N 
Sbjct: 171 SLMKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNR 230

Query: 66  GDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEV 125
            D     +DLE MCRHAVDRS G LI+I I Y+GT++L+ YI   S+ L+ L L  C  +
Sbjct: 231 NDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPI 290

Query: 126 SDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSN-- 185
           +DEG+ +AVS++PLLE+LE+    F  ++L+ +GR CP LK+LKL       E M SN  
Sbjct: 291 TDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKL---NRAPEIMFSNSG 350

Query: 186 --EEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKE 245
             + A AIAE+MP+L HLQ++GNGLTN GL AILDGCP LE LDL QCFN+NL G L+K 
Sbjct: 351 FDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKR 410

Query: 246 CAEKVKVLYLPHDRVTDGNECTTK--TTNFGARDSEDE 277
           C E++K L  P+D   D ++ +     T FG++ +E +
Sbjct: 411 CFERIKDLRCPNDSDDDSDDGSDNGAVTTFGSQFNETD 445

BLAST of CaUC01G024650 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.6e-63
Identity = 133/279 (47.67%), Postives = 182/279 (65.23%), Query Frame = 0

Query: 7   IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLG 66
           ++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL 
Sbjct: 18  MKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLR 77

Query: 67  DSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELLQYITRSSNQLRRLRLADCDE 126
             Y +Y  +E  CRH VD S G L++ NI+   F T  LL Y+   S+ LRRLR+    +
Sbjct: 78  RLYCIY-AMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKG-GQ 137

Query: 127 VSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNE 186
           ++  G+ EA+ +LPLLE LE+L  S + +  KT+G+ CP LK+LKLV    W+    S+ 
Sbjct: 138 ITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDN 197

Query: 187 EALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAE 246
           +ALAIA+TMP L HLQ+I NGLTNIGL AILDGCP LE LDL QCFN+NL G LE++C E
Sbjct: 198 DALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLE 257

Query: 247 KVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS 283
           ++K    P+D V D       + N    D + E+  ++S
Sbjct: 258 RIKDFRCPND-VLDDYNYVIFSDNGSIEDEKGEEEENYS 291

BLAST of CaUC01G024650 vs. ExPASy Swiss-Prot
Match: Q9M0U7 (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 6.4e-57
Identity = 122/262 (46.56%), Postives = 166/262 (63.36%), Query Frame = 0

Query: 8   QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGD 67
           + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+I KDP MWR I   NL D
Sbjct: 32  KDDEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRD 91

Query: 68  SYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEVSD 127
                 D E MCRH VD S G L++INIE+F +D LL YI   S  L+ L ++  + +++
Sbjct: 92  CLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTN 151

Query: 128 EGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----- 187
           +G+   + +LPLLE L I   S  +D LK +G  CP LK+LKL    S   H +S     
Sbjct: 152 KGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYI 211

Query: 188 -----NEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAG 247
                +++ALAIAE+MPKL HLQ++GNGLTN GL AILDGCP LE  LD+ +CFN+NL G
Sbjct: 212 PLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVG 271

Query: 248 QLEKECAEKVKVLYLPHDRVTD 258
            LEK C +++K L  PHD   D
Sbjct: 272 NLEKRCMKRIKELRRPHDSTAD 289

BLAST of CaUC01G024650 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 9.6e-53
Identity = 114/233 (48.93%), Postives = 150/233 (64.38%), Query Frame = 0

Query: 12  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDS 71
           E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++ +DP MWR ID+    NL +S
Sbjct: 17  EYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNS 76

Query: 72  YDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEVSDE 131
            ++++ +E +C  AVD S G L++INI+Y      L YI   S+ LRRL + DC  V   
Sbjct: 77  VELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSR 136

Query: 132 GLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEAL 191
           G+ EA  +LPLLE L+I    S     LK VG+ CP L++LKL       +    ++ AL
Sbjct: 137 GVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKL---NCTGDVKCCDKVAL 196

Query: 192 AIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK 240
           AIAETMP L HLQ+  NGL+  GL AIL+GCP L++L LHQC N+N+ G + K
Sbjct: 197 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246

BLAST of CaUC01G024650 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 2.3e-94
Identity = 198/310 (63.87%), Postives = 233/310 (75.16%), Query Frame = 0

Query: 1   MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVI 60
           MESN    S  E RNWLELPA++ SMILLKLGAIEIL+SAQ+VCS WRKI KDPLMWRV+
Sbjct: 1   MESNPI--SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVV 60

Query: 61  DMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLA 120
           DMHN+G+ +DM +DLE MC  AVDRSCG+LIDINI+YFGT+ELLQYIT+SSNQLRRLR+ 
Sbjct: 61  DMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIV 120

Query: 121 DCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHM 180
            C  ++D GL+EAVS+LPLLEHLEI + SF   TL+TVGRCC LLKSLKL  +      +
Sbjct: 121 RCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMI 180

Query: 181 VSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK 240
             + +A+AIAE MP L +LQI G+ LT+ GLQAILDGCPDLESLDL QCFNL+L GQL  
Sbjct: 181 DCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGV 240

Query: 241 ECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV 300
           ECAE++K L LPHD  TD  E   +T  FG  DS DED  + FSDI     D D Y++  
Sbjct: 241 ECAERIKHLRLPHD-PTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG 300

Query: 301 DGNFLDYDDF 304
             NF DY DF
Sbjct: 301 GSNFSDYADF 306

BLAST of CaUC01G024650 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-91
Identity = 191/308 (62.01%), Postives = 226/308 (73.38%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FGTD+LLQYIT+SSNQLR+LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEG  +AVS+LPLLE LEI   SFDV+TL+T+G C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGFIKAVSKLPLLEDLEISFGSFDVETLETLGHCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

BLAST of CaUC01G024650 vs. ExPASy TrEMBL
Match: A0A6J1ECV6 (F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-91
Identity = 192/310 (61.94%), Postives = 227/310 (73.23%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI I IE+FGTD+LLQYIT+SSNQLR LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

Query: 301 VDGNFLDYDD 303
              +F DY D
Sbjct: 303 GGSDFSDYTD 309

BLAST of CaUC01G024650 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 5.4e-91
Identity = 191/308 (62.01%), Postives = 226/308 (73.38%), Query Frame = 0

Query: 1   MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRV 60
           MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRL 120
           +DM   GD +DM +DLE MCR AVDRSCGQLI I IE+FGTD+LLQYIT+SSNQLR LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRL 122

Query: 121 ADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEH 180
             C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKL--NRQFYRR 182

Query: 181 MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLE 240
           +  ++ ALAIAE MP L HLQI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL 
Sbjct: 183 VECDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLG 242

Query: 241 KECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL 300
            +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Sbjct: 243 AKCSEKIKNLRLPHD-PTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFS 302

BLAST of CaUC01G024650 vs. ExPASy TrEMBL
Match: A0A6J1CYW9 (putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015857 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 6.2e-87
Identity = 171/261 (65.52%), Postives = 198/261 (75.86%), Query Frame = 0

Query: 1   MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVI 60
           MESNS   SE   RNWLELPA+  SMIL+KLGA++IL++AQ VCS WRKI  DPLMWRV+
Sbjct: 1   MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVV 60

Query: 61  DMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLA 120
           DM NL DS DM  DLE MC  AVDRSCGQL+DINIE FGTDELL YI +SSNQLRRLRL 
Sbjct: 61  DMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQSSNQLRRLRLV 120

Query: 121 DCDEVSDEGLTEAVSRLPLLEHLEILIF--SFDVDTLKTVGRCCPLLKSLKLVEEQSWTE 180
            C ++S +GL EAV +LPLLE LEI     SFD++TLKTVGRCCPLL SLKL        
Sbjct: 121 YCHDISGKGLAEAVPKLPLLEDLEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGP 180

Query: 181 HMVS-NEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQ 240
            ++  +EEALAIAE MP L HL I  N LT++GLQAILDGCP LESLDL  C NLNL GQ
Sbjct: 181 RLMGCDEEALAIAENMPNLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQ 240

Query: 241 LEKECAEKVKVLYLPHDRVTD 258
           LEK+C++++K L LP+D + D
Sbjct: 241 LEKKCSKRIKSLQLPYDPIDD 261

BLAST of CaUC01G024650 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 288.1 bits (736), Expect = 8.8e-78
Identity = 166/315 (52.70%), Postives = 207/315 (65.71%), Query Frame = 0

Query: 1   MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMW 60
           M S+S+  +  EV    NW ELP E+ S IL +LGAIEIL +AQ VC SWR++ KDP MW
Sbjct: 1   MASSSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMW 60

Query: 61  RVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRL 120
           R IDMHNLGD  DM ++LEIMCRHAVDRS G L+DI I YFGT +LL YI   S+ LR L
Sbjct: 61  RKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSL 120

Query: 121 RLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWT 180
           RL  C +++D+G  EAV +LP LE LE+   SF V++L+ VG+CC  +K+LKL +     
Sbjct: 121 RLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNKH---- 180

Query: 181 EHMVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQ 240
               ++++ALAIAETMPKL HLQ+ GNGL++ GL AILD C +LE LDL +CFN+NL G 
Sbjct: 181 PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGD 240

Query: 241 LEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS----- 300
           L+K C E VKV+  P+D + D               SEDED  DFSDID   GD      
Sbjct: 241 LQKRCFESVKVVRHPNDSIHD----------IDIGSSEDEDPYDFSDIDLMSGDDDFEGY 300

Query: 301 YDFLVDGNFLDYDDF 304
           YDF    +F DYD F
Sbjct: 301 YDFSGASDFSDYDQF 300

BLAST of CaUC01G024650 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 243.0 bits (619), Expect = 3.3e-64
Identity = 133/279 (47.67%), Postives = 182/279 (65.23%), Query Frame = 0

Query: 7   IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLG 66
           ++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL 
Sbjct: 18  MKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLR 77

Query: 67  DSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELLQYITRSSNQLRRLRLADCDE 126
             Y +Y  +E  CRH VD S G L++ NI+   F T  LL Y+   S+ LRRLR+    +
Sbjct: 78  RLYCIY-AMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKG-GQ 137

Query: 127 VSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNE 186
           ++  G+ EA+ +LPLLE LE+L  S + +  KT+G+ CP LK+LKLV    W+    S+ 
Sbjct: 138 ITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDN 197

Query: 187 EALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAE 246
           +ALAIA+TMP L HLQ+I NGLTNIGL AILDGCP LE LDL QCFN+NL G LE++C E
Sbjct: 198 DALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLE 257

Query: 247 KVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS 283
           ++K    P+D V D       + N    D + E+  ++S
Sbjct: 258 RIKDFRCPND-VLDDYNYVIFSDNGSIEDEKGEEEENYS 291

BLAST of CaUC01G024650 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 4.6e-58
Identity = 122/262 (46.56%), Postives = 166/262 (63.36%), Query Frame = 0

Query: 8   QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGD 67
           + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+I KDP MWR I   NL D
Sbjct: 32  KDDEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRD 91

Query: 68  SYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEVSD 127
                 D E MCRH VD S G L++INIE+F +D LL YI   S  L+ L ++  + +++
Sbjct: 92  CLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTN 151

Query: 128 EGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----- 187
           +G+   + +LPLLE L I   S  +D LK +G  CP LK+LKL    S   H +S     
Sbjct: 152 KGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYI 211

Query: 188 -----NEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAG 247
                +++ALAIAE+MPKL HLQ++GNGLTN GL AILDGCP LE  LD+ +CFN+NL G
Sbjct: 212 PLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVG 271

Query: 248 QLEKECAEKVKVLYLPHDRVTD 258
            LEK C +++K L  PHD   D
Sbjct: 272 NLEKRCMKRIKELRRPHDSTAD 289

BLAST of CaUC01G024650 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 6.8e-54
Identity = 114/233 (48.93%), Postives = 150/233 (64.38%), Query Frame = 0

Query: 12  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDS 71
           E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++ +DP MWR ID+    NL +S
Sbjct: 17  EYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNS 76

Query: 72  YDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSSNQLRRLRLADCDEVSDE 131
            ++++ +E +C  AVD S G L++INI+Y      L YI   S+ LRRL + DC  V   
Sbjct: 77  VELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSR 136

Query: 132 GLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEAL 191
           G+ EA  +LPLLE L+I    S     LK VG+ CP L++LKL       +    ++ AL
Sbjct: 137 GVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKL---NCTGDVKCCDKVAL 196

Query: 192 AIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK 240
           AIAETMP L HLQ+  NGL+  GL AIL+GCP L++L LHQC N+N+ G + K
Sbjct: 197 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246

BLAST of CaUC01G024650 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-51
Identity = 119/263 (45.25%), Postives = 155/263 (58.94%), Query Frame = 0

Query: 12  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDM 71
           E RNW++LP E+ + ILL+L   +IL +AQ VC  WR+I KDP MWR I   N  D    
Sbjct: 42  ERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMY 101

Query: 72  YHDLEIMCRHAVDRSCGQLIDINI-EYFGTDELLQYITRSSNQLRRLRLADC-DEVSDEG 131
             D   MCRH VD S G L++IN+ E+F +D LL YIT     LR L L  C   V+  G
Sbjct: 102 NFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYIT--DRNLRSLGLGMCFPRVTKLG 161

Query: 132 LTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVE-EQSWTEH--------- 191
           +  A++++PLLE LE+      +D LK +G  CP LK+LKL    + W            
Sbjct: 162 VVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLD 221

Query: 192 ----MVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLA 251
               +  +++ALAIAE+MPKL HLQ++ N LTN GL AILDGCP LE LD+ +CF ++L 
Sbjct: 222 DMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLV 281

Query: 252 GQLEKECAEKVKVLYLPHDRVTD 258
           G LEK C E +K L  P D   D
Sbjct: 282 GNLEKRCLEMIKELRRPGDSTAD 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883506.11.9e-15183.38F-box protein SKIP19-like [Benincasa hispida][more]
XP_022146630.14.8e-9463.87F-box protein SKIP19-like [Momordica charantia][more]
KAG7034751.14.1e-9361.83Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subs... [more]
KAG6581459.11.3e-9161.94F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023543623.12.2e-9161.94F-box protein SKIP19-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9M0U91.2e-7652.70F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
Q9S9V93.3e-6949.64Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
Q9M0U64.6e-6347.67Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE... [more]
Q9M0U76.4e-5746.56Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE... [more]
Q9S9V89.6e-5348.93Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4... [more]
Match NameE-valueIdentityDescription
A0A6J1CXS52.3e-9463.87F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV... [more]
A0A6J1ILH52.4e-9162.01F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1[more]
A0A6J1ECV62.4e-9161.94F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114331... [more]
A0A6J1EGI85.4e-9162.01F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114331... [more]
A0A6J1CYW96.2e-8765.52putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
Match NameE-valueIdentityDescription
AT4G05460.18.8e-7852.70RNI-like superfamily protein [more]
AT4G05490.13.3e-6447.67RNI-like superfamily protein [more]
AT4G05475.14.6e-5846.56RNI-like superfamily protein [more]
AT4G05497.16.8e-5448.93RNI-like superfamily protein [more]
AT4G05470.13.2e-5145.25RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 86..109
e-value: 190.0
score: 4.5
coord: 110..135
e-value: 10.0
score: 14.6
coord: 192..216
e-value: 53.0
score: 8.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 9..60
e-value: 2.6E-6
score: 29.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..282
NoneNo IPR availablePANTHERPTHR38926F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 10..276
NoneNo IPR availablePANTHERPTHR38926:SF20F-BOX PROTEIN SKIP19-RELATEDcoord: 10..276
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 83..232
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 63..280
e-value: 6.4E-24
score: 86.1
IPR001810F-box domainPROSITEPS50181FBOXcoord: 13..59
score: 8.649649
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 8..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G024650.1CaUC01G024650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding