CaUC01G024460 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G024460
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ALA-interacting subunit
Location	Ciama_Chr01: 36437217 .. 36438323 (+)
RNA-Seq Expression	CaUC01G024460
Synteny	CaUC01G024460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCACTGCTGCTCTTCCAAGCTTCAGAAAGTTATACGGTAGAATTGAAGAAGATTTGCATGCTGAGGATGTTCTAGATATCAAGATAATGAACAACTACAACACTTACAGCTTTGGAGGAACAAAGAAGCTTGTTATTTCAACATCAAGCTGGTTGGGGGGGAGAAACGATTTCCTTGGATGTGCCTACATTTTTGTGGGATCTTCTTCGCTCTTGATTTCTATATTCTTCACATTGCTACACATGAAATCGAGGTAATATACTAAGCCATTGTGTCTGTAATGTTGCATATACGTTGTTGCTGACGTGCATATACAGTCACTGGGCTTTATTACATTTTTCCACTGGAAGTAAGATTTGATGTATTTCATTATATCGTTACTGCAACAACTCTAGTCTCTACTATCCTGCTTATGCTTGATATCCTACCATTGCCTTCCCACTTATTCGTCGGTCCTGCTGCCCTCCTATTCTTATTAAATCAGTCTTAAGTTCTATAAACAAGAATACTATGGACTGGTTTGTAATGATTTTCCAAGTGCTTTAAAAGTGTTCTTAAGCACAGAGAAGTCATTCCAAAATAGTCCACGAATATTTCTTTTTCTTCAAGGATTTCTATTACTGTTCATAGCTAATTTCGTCTTTACTAGAGGGCGGATTTAACTTGGTTTATATTTGGTCCTTTATTCTTCTTTCTTGCTTTTATTATGGTAGGCCCTTCATGGAAACAAACTTTTCATCAAGGAATAAAAGATGCAGTTCGGAATCGGATTAATGATATATTGCTTTGAGAAACGTCAAGGAACTAGAGCAGTTAGTTTCATAGAGAGCCCAAGTTTCTTCTTTTTATGGGGTGCAAATTTCAAAGAAGGATATACTTATTTGGCGGCACTGTTCATTGGTATGTTACATTTTTCATTCGAACGATAATATTGAATCCTGAATAAACAGTGAAATGTTGATAAGGTTGAATGTGGGAACTATTTTTCATTGTAAATATGTTTGTGGTTGCTCAATCTATAGAACAGAAGGTAAATGGAAAGTTGTATAAAGTCTTAAGCCTTTTTTTTCCTAATATTACGTAGATATCAGATTTATATTCTA

mRNA sequence

ATGCGCACTGCTGCTCTTCCAAGCTTCAGAAAGTTATACGGTAGAATTGAAGAAGATTTGCATGCTGAGGATGTTCTAGATATCAAGATAATGAACAACTACAACACTTACAGCTTTGGAGGAACAAAGAAGCTTGTTATTTCAACATCAAGCTGGTTGGGGGGGAGAAACGATTTCCTTGGATGTGCCTACATTTTTGTGGGATCTTCTTCGCTCTTGATTTCTATATTCTTCACATTGCTACACATGAAATCGAGGCCCTTCATGGAAACAAACTTTTCATCAAGGAATAAAAGATGCAGTTCGGAATCGGATTAATGATATATTGCTTTGAGAAACGTCAAGGAACTAGAGCAGTTAGTTTCATAGAGAGCCCAAGTTTCTTCTTTTTATGGGGTGCAAATTTCAAAGAAGGATATACTTATTTGGCGGCACTGTTCATTGGTATGTTACATTTTTCATTCGAACGATAATATTGAATCCTGAATAAACAGTGAAATGTTGATAAGGTTGAATGTGGGAACTATTTTTCATTGTAAATATGTTTGTGGTTGCTCAATCTATAGAACAGAAGGTAAATGGAAAGTTGTATAAAGTCTTAAGCCTTTTTTTTCCTAATATTACGTAGATATCAGATTTATATTCTA

Coding sequence (CDS)

ATGCGCACTGCTGCTCTTCCAAGCTTCAGAAAGTTATACGGTAGAATTGAAGAAGATTTGCATGCTGAGGATGTTCTAGATATCAAGATAATGAACAACTACAACACTTACAGCTTTGGAGGAACAAAGAAGCTTGTTATTTCAACATCAAGCTGGTTGGGGGGGAGAAACGATTTCCTTGGATGTGCCTACATTTTTGTGGGATCTTCTTCGCTCTTGATTTCTATATTCTTCACATTGCTACACATGAAATCGAGGCCCTTCATGGAAACAAACTTTTCATCAAGGAATAAAAGATGCAGTTCGGAATCGGATTAA

Protein sequence

MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFLGCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSESD

Homology

[Close]

BLAST of CaUC01G024460 vs. NCBI nr
Match: XP_038881728.1 (putative ALA-interacting subunit 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVLDIKIMNNYNTYSFGG KKLVISTSSWLGGRNDFL
Sbjct: 191 MRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGRKKLVISTSSWLGGRNDFL 250

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSESD 106
           G AYIFVGSSSL+ISIFFTLLHMKSRPFMETNFSSRNKR SS SD
Sbjct: 251 GWAYIFVGSSSLMISIFFTLLHMKSRPFMETNFSSRNKRSSSASD 295

[Close]

BLAST of CaUC01G024460 vs. NCBI nr
Match: XP_038881726.1 (putative ALA-interacting subunit 2 isoform X1 [Benincasa hispida] >XP_038881727.1 putative ALA-interacting subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVLDIKIMNNYNTYSFGG KKLVISTSSWLGGRNDFL
Sbjct: 251 MRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGRKKLVISTSSWLGGRNDFL 310

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSESD 106
           G AYIFVGSSSL+ISIFFTLLHMKSRPFMETNFSSRNKR SS SD
Sbjct: 311 GWAYIFVGSSSLMISIFFTLLHMKSRPFMETNFSSRNKRSSSASD 355

[Close]

BLAST of CaUC01G024460 vs. NCBI nr
Match: XP_004134592.1 (putative ALA-interacting subunit 2 isoform X1 [Cucumis sativus] >KGN49419.1 hypothetical protein Csa_004237 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-45
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 251 MRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 310

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIF+GSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 311 GCAYIFLGSSSLLVSIFFTLLHMKSRPFREINFSSRNKGSSTD 353

[Close]

BLAST of CaUC01G024460 vs. NCBI nr
Match: XP_031744030.1 (putative ALA-interacting subunit 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-45
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 191 MRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 250

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIF+GSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 251 GCAYIFLGSSSLLVSIFFTLLHMKSRPFREINFSSRNKGSSTD 293

[Close]

BLAST of CaUC01G024460 vs. NCBI nr
Match: XP_008439603.1 (PREDICTED: putative ALA-interacting subunit 2 isoform X2 [Cucumis melo] >XP_008439604.1 PREDICTED: putative ALA-interacting subunit 2 isoform X2 [Cucumis melo] >XP_008439605.1 PREDICTED: putative ALA-interacting subunit 2 isoform X2 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVL IK+MNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 251 MRTAALPSFRKLYGRIEEDLHADDVLAIKLMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 310

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIFVGSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 311 GCAYIFVGSSSLLVSIFFTLLHMKSRPFREINFSSRNKSSSTD 353

[Close]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot
Match: Q67YS6 (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana OX=3702 GN=ALIS2 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-29
Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MR AAL SFRKLYGRIEEDL    V+++ +MNNYNTYSF G KKL++STS+WLGGRNDFL
Sbjct: 243 MRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFL 302

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKS-RPFMETNFSSRN 98
           G  Y+ VGSSS++ISI F LLH+K+ RP+ + +++ ++
Sbjct: 303 GITYLVVGSSSIVISIIFMLLHLKNPRPYGDNSWNKKS 340

[Close]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot
Match: Q8L8W0 (ALA-interacting subunit 5 OS=Arabidopsis thaliana OX=3702 GN=ALIS5 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+IE DLHA D + + + NNYNTYSF G KKLV+ST+SWLGGRNDFL
Sbjct: 246 MRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFL 305

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VGS  L +++ F +L++ K R   + ++ S N+
Sbjct: 306 GIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 344

[Close]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot
Match: Q9SA35 (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ALIS4 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-25
Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+I+ DL A D + + + NNYNTYSF G KKLV+ST+SWLGGRNDFL
Sbjct: 232 MRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFL 291

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VGS  L +++ F++L++ K R   + ++ S N+
Sbjct: 292 GIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNR 330

[Close]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot
Match: Q9SLK2 (ALA-interacting subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ALIS3 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.0e-25
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+IE DL   D + +K+ NNYNTYSF G KKLV+ST+SWLGG+NDFL
Sbjct: 246 MRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 305

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VG    ++++ FT++++ K R   + ++ S N+
Sbjct: 306 GIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNR 344

[Close]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot
Match: Q9LTW0 (ALA-interacting subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ALIS1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.9e-23
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+IE DL   + + + + NNYNTYSF G KKLV+ST+SWLGG+NDFL
Sbjct: 247 MRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFL 306

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VG    ++++ FT++++ K R   +  + S N+
Sbjct: 307 GIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNR 345

[Close]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL
Match: A0A0A0KKQ5 (ALA-interacting subunit OS=Cucumis sativus OX=3659 GN=Csa_6G524080 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 251 MRTAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 310

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIF+GSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 311 GCAYIFLGSSSLLVSIFFTLLHMKSRPFREINFSSRNKGSSTD 353

[Close]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL
Match: A0A1S3AZT5 (ALA-interacting subunit OS=Cucumis melo OX=3656 GN=LOC103484348 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-45
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVL IK+MNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 251 MRTAALPSFRKLYGRIEEDLHADDVLAIKLMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 310

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIFVGSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 311 GCAYIFVGSSSLLVSIFFTLLHMKSRPFREINFSSRNKSSSTD 353

[Close]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL
Match: A0A1S3AZS3 (ALA-interacting subunit OS=Cucumis melo OX=3656 GN=LOC103484348 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-45
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALPSFRKLYGRIEEDLHA+DVL IK+MNNYNTYSFGGTKKLVISTSSWLGGRNDFL
Sbjct: 279 MRTAALPSFRKLYGRIEEDLHADDVLAIKLMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 338

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSSE 104
           GCAYIFVGSSSLL+SIFFTLLHMKSRPF E NFSSRNK  S++
Sbjct: 339 GCAYIFVGSSSLLVSIFFTLLHMKSRPFREINFSSRNKSSSTD 381

[Close]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL
Match: A0A6J1EJC8 (ALA-interacting subunit OS=Cucurbita moschata OX=3662 GN=LOC111433835 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MR AALPSFRKLYGRIEEDLHA+DVLDIKIMNNYN+YSFGG KKLVISTSSWLGGRNDFL
Sbjct: 248 MRAAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNSYSFGGRKKLVISTSSWLGGRNDFL 307

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSS 103
           G AYIFVGSSSLLISIFFTLLHMKSRP+ ETN+S+ NKR SS
Sbjct: 308 GVAYIFVGSSSLLISIFFTLLHMKSRPYGETNYSTWNKRSSS 349

[Close]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL
Match: A0A6J1KPF7 (ALA-interacting subunit OS=Cucurbita maxima OX=3661 GN=LOC111497097 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MR AALPSFRKLYGRIEEDLHA+DVLDIKIMNNYN+YSFGG KKLVISTSSWLGGRNDFL
Sbjct: 248 MRAAALPSFRKLYGRIEEDLHADDVLDIKIMNNYNSYSFGGRKKLVISTSSWLGGRNDFL 307

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKSRPFMETNFSSRNKRCSS 103
           G AYIFVGSSSLLISIFFTLLHMKSRP+ ETN+S+  KR SS
Sbjct: 308 GVAYIFVGSSSLLISIFFTLLHMKSRPYGETNYSTWIKRSSS 349

[Close]

BLAST of CaUC01G024460 vs. TAIR 10
Match: AT5G46150.2 (LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein )

HSP 1 Score: 128.3 bits (321), Expect = 3.7e-30
Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MR AAL SFRKLYGRIEEDL    V+++ +MNNYNTYSF G KKL++STS+WLGGRNDFL
Sbjct: 243 MRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFL 302

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKS-RPFMETNFSSRN 98
           G  Y+ VGSSS++ISI F LLH+K+ RP+ + +++ ++
Sbjct: 303 GITYLVVGSSSIVISIIFMLLHLKNPRPYGDNSWNKKS 340

[Close]

BLAST of CaUC01G024460 vs. TAIR 10
Match: AT5G46150.1 (LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein )

HSP 1 Score: 128.3 bits (321), Expect = 3.7e-30
Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MR AAL SFRKLYGRIEEDL    V+++ +MNNYNTYSF G KKL++STS+WLGGRNDFL
Sbjct: 243 MRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFL 302

Query: 61  GCAYIFVGSSSLLISIFFTLLHMKS-RPFMETNFSSRN 98
           G  Y+ VGSSS++ISI F LLH+K+ RP+ + +++ ++
Sbjct: 303 GITYLVVGSSSIVISIIFMLLHLKNPRPYGDNSWNKKS 340

[Close]

BLAST of CaUC01G024460 vs. TAIR 10
Match: AT1G79450.1 (ALA-interacting subunit 5 )

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-27
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+IE DLHA D + + + NNYNTYSF G KKLV+ST+SWLGGRNDFL
Sbjct: 246 MRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFL 305

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VGS  L +++ F +L++ K R   + ++ S N+
Sbjct: 306 GIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 344

[Close]

BLAST of CaUC01G024460 vs. TAIR 10
Match: AT1G79450.2 (ALA-interacting subunit 5 )

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-27
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+IE DLHA D + + + NNYNTYSF G KKLV+ST+SWLGGRNDFL
Sbjct: 179 MRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFL 238

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VGS  L +++ F +L++ K R   + ++ S N+
Sbjct: 239 GIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNR 277

[Close]

BLAST of CaUC01G024460 vs. TAIR 10
Match: AT1G16360.1 (LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MRTAALPSFRKLYGRIEEDLHAEDVLDIKIMNNYNTYSFGGTKKLVISTSSWLGGRNDFL 60
           MRTAALP+FRKLYG+I+ DL A D + + + NNYNTYSF G KKLV+ST+SWLGGRNDFL
Sbjct: 232 MRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFL 291

Query: 61  GCAYIFVGSSSLLISIFFTLLHM-KSRPFMETNFSSRNK 99
           G AY+ VGS  L +++ F++L++ K R   + ++ S N+
Sbjct: 292 GIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNR 330

The following BLAST results are available for this feature:

BLAST of CaUC01G024460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881728.1	1.2e-46	94.29	putative ALA-interacting subunit 2 isoform X2 [Benincasa hispida]	[more]
XP_038881726.1	1.2e-46	94.29	putative ALA-interacting subunit 2 isoform X1 [Benincasa hispida] >XP_038881727....	[more]
XP_004134592.1	3.0e-45	91.26	putative ALA-interacting subunit 2 isoform X1 [Cucumis sativus] >KGN49419.1 hypo...	[more]
XP_031744030.1	3.0e-45	91.26	putative ALA-interacting subunit 2 isoform X2 [Cucumis sativus]	[more]
XP_008439603.1	1.5e-44	90.29	PREDICTED: putative ALA-interacting subunit 2 isoform X2 [Cucumis melo] >XP_0084...	[more]

BLAST of CaUC01G024460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YS6	5.3e-29	62.24	Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana OX=3702 GN=ALIS2 PE=2...	[more]
Q8L8W0	1.4e-26	58.59	ALA-interacting subunit 5 OS=Arabidopsis thaliana OX=3702 GN=ALIS5 PE=1 SV=1	[more]
Q9SA35	2.1e-25	56.57	Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ALIS4 PE=2...	[more]
Q9SLK2	6.0e-25	54.55	ALA-interacting subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ALIS3 PE=1 SV=1	[more]
Q9LTW0	1.9e-23	52.53	ALA-interacting subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ALIS1 PE=1 SV=1	[more]

BLAST of CaUC01G024460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKQ5	1.4e-45	91.26	ALA-interacting subunit OS=Cucumis sativus OX=3659 GN=Csa_6G524080 PE=3 SV=1	[more]
A0A1S3AZT5	7.1e-45	90.29	ALA-interacting subunit OS=Cucumis melo OX=3656 GN=LOC103484348 PE=3 SV=1	[more]
A0A1S3AZS3	7.1e-45	90.29	ALA-interacting subunit OS=Cucumis melo OX=3656 GN=LOC103484348 PE=3 SV=1	[more]
A0A6J1EJC8	1.5e-42	89.22	ALA-interacting subunit OS=Cucurbita moschata OX=3662 GN=LOC111433835 PE=3 SV=1	[more]
A0A6J1KPF7	1.6e-41	88.24	ALA-interacting subunit OS=Cucurbita maxima OX=3661 GN=LOC111497097 PE=3 SV=1	[more]

BLAST of CaUC01G024460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46150.2	3.7e-30	62.24	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	[more]
AT5G46150.1	3.7e-30	62.24	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	[more]
AT1G79450.1	1.0e-27	58.59	ALA-interacting subunit 5	[more]
AT1G79450.2	1.0e-27	58.59	ALA-interacting subunit 5	[more]
AT1G16360.1	1.5e-26	56.57	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005045	CDC50/LEM3 family	PFAM	PF03381	CDC50	coord: 1..85 e-value: 1.0E-30 score: 107.2
IPR005045	CDC50/LEM3 family	PANTHER	PTHR10926	CELL CYCLE CONTROL PROTEIN 50	coord: 1..100
None	No IPR available	PANTHER	PTHR10926:SF29	ALA-INTERACTING SUBUNIT 2-RELATED	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G024460.1	CaUC01G024460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane