
CaUC01G024030 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATTAATACCATACGAATTAGACGTCTGAGAAGCTGTCTTGGAGGAAGAATGTTTTTCTTTTTGGTTTGTCGAAACAATGATCATTCACAGGCCTTGTATTCACTTGCCAATGATAGGAATTTCATGGGCTCTGCTGGATTTAACTTTTTCTGTTTTGGAAGGTTTAGTGATCATTTTACTGATCGCCCTTGGAAAAATATGACTGGTTTTGTGTATTTGTTAATATGATTATTGTGCACTTGCAAAATTTAGGAAGTTCTTAGGCTATTTGCTTATGGTTGTGTGCAGGGGGCAATTCAAACATTGAGTTTGTTGGTCTATCTTACTTTTGCGGTTGTTTCACTTTTATATTACTGGTTGGAGGAGTGAGAATGTGCATTGGTATAACGGGAAAGAGAAACAGAGCTGTCGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTAATGCAAGTTTGTCAGGTAATCCACAATCTTCAAATTTTACACTGGTGCTTTATTTGTGGTTACACTTCACACATTTGAAGTTTATGAAATTTAATGTTGTTAGCTGTCTCTTTACTTATCCGAAAAATGTCTTTCAACTTTAGAGTTGAAATTGATTTTCTAAGTACATGCACCTTATCTCCTATGTTTTTCTTTTCAGACTTTCACCAAGTAGCTATAGTTAATAAATAATAAATTGACAAGAGGAGTTTTTACTTGCAACAATATTGTAGATACTGGTGTTTAGTTCAAATCTCTTTCTTTTGATTGTTTAATAGTTAAACTAAGGTATTGTAGTACATTTTCCAAATATTAAGCATACATATGCATTTTTTCATCTCAAAGTTAAGCTTTTTGCTTTCTTCTCTCAGCTTCCTTGAAGATTATGTTTACAGTATCTCAAAGCATAACTTTGTTTTGTAGCTGTTGCGACTCCTTCGGAGTTCTGGATTTGTATGAAATTTGTAGTTTAAAAAGTTGGTTACTGGTGAATTGTTGAATTATTGTGGCAAATCCTTTTTTCCATAGATGAATTCCTAAAGCACATTATCGAATGAACTAATACTATCTGTGATCATTTGGATTGTCTTTACTGCTTCTGTTGTTAGACTACTAAAGCACATCTTTAAGTTTACTGCTGTTGACAACTTTCAATTTGTTCCTTACAGGCCGAGTATTTTCGCCAGTTGCTAAAGCCTGTCACGTAGGATAGCAAAAAGCATTTGGACATTGGGGAGTTAGGTGGACTGGCCTCCAGTTGTGCTAGAAGTGAAGAAATGAAATATTTCTTTCCTGTTTGTCTTTAATTTGATATAAAGATCTTGCTTAAATTTAAATGGCAACATATAGAGTTGCTGTGTAGTCTTCTCGTTAGTTAACGTCCTGTTTTAATTTTCGTAATATAATAGCAAGCTCTCCTGAGAGAAGACACGGTAACTTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTATATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAGAAGGCAATGCGTCCCACAGCAAACCAGGGGGACGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCGTCTGTTTTGCCTCCTGGGAGAAAGAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTTGACCACACTGACAATCGAAGCCAAATCATGTTTCATCCTGCAATTGCCAACAAACTCAGTGGTCCTACTGCGAATATGTGTTCAAAGTACATCCAAAAGAACTTCTGCATCAATGACGAGCATTATGAAGATAGAGAAATATCGTCTCCTTTGATGGAGGATTTGGATGATATTGATGCACTATTGAGCTTGGAAGACGAAGATCACGAAGACCTTGATGGATCTGAAGATGAAGAGGTCAGCACTGCAAGGTCTCATCTGAATTATGGCAATCGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCAACAGTGATGTGAAACAGTTGAAAGTAAAGAAAATGGTGAGGAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACAGTCACCGTTCTGGACGAAGCTGTTAAATACTTGAAATCTCTGAAGGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAGCTAAGGCACAAGTAATGCCATCTGGTTGCATCAGCTGTAGAACTCTGTAAGGATTCTCTCATATCTTGTGTCTCTCCCTGCCACCTAGTACAAAATAAAAAGGTTAAAATGTTTCATGTCACAAAAGATTATTAGCGGCTTTTCTAAATGTTGTTTCGAGTTTCATATGCTTGCAGACGATGTGACTGTGGAACCAAGATTTCTTGTCAGGCTCCTGGACTATGTTAATTCATGTTTTACTTCGGTATCTAGAAGTTGAGGGATTGATCTGCCGTTTCTATTGGCATTTGTTGTATTTGCAGAAGGTTATCTATGATTCAAGACTGCCATGTACTTTTGAACGTCTATTTGTCAATCTATTCCATAATCCCCATCAATGGCTTCCTCATCTGTATTTGGAAATATTGAAAAGTCTCATAATATTCCTGTGGTTTCAGAGAATCTAGCTACAGAAAATTAAAATA ATGTTGATTAATACCATACGAATTAGACGTCTGAGAAGCTGTCTTGGAGGAAGAATGTTTTTCTTTTTGGTTTGTCGAAACAATGATCATTCACAGGCCTTGTATTCACTTGCCAATGATAGGAATTTCATGGGCTCTGCTGGATTTAACTTTTTCTGTTTTGGAAGGTTTAGTGATCATTTTACTGATCGCCCTTGGAAAAATATGACTGGGGGCAATTCAAACATTGAGTTTGTTGGTCTATCTTACTTTTGCGGTTGTTTCACTTTTATATTACTGGTTGGAGGAGTGAGAATGTGCATTGGTATAACGGGAAAGAGAAACAGAGCTGTCGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTAATGCAAGTTTGTCAGGCCGAGTATTTTCGCCAGTTGCTAAAGCCTGTCACGTAGGATAGCAAAAAGCATTTGGACATTGGGGAGTTAGGTGGACTGGCCTCCAGTTGTGCTAGAAGTGAAGAAATGAAATATTTCTTTCCTGTTTGTCTTTAATTTGATATAAAGATCTTGCTTAAATTTAAATGGCAACATATAGAGTTGCTGTGTAGTCTTCTCGTTAGTTAACGTCCTGTTTTAATTTTCGTAATATAATAGCAAGCTCTCCTGAGAGAAGACACGGTAACTTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTATATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAGAAGGCAATGCGTCCCACAGCAAACCAGGGGGACGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCGTCTGTTTTGCCTCCTGGGAGAAAGAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTTGACCACACTGACAATCGAAGCCAAATCATGTTTCATCCTGCAATTGCCAACAAACTCAGTGGTCCTACTGCGAATATGTGTTCAAAGTACATCCAAAAGAACTTCTGCATCAATGACGAGCATTATGAAGATAGAGAAATATCGTCTCCTTTGATGGAGGATTTGGATGATATTGATGCACTATTGAGCTTGGAAGACGAAGATCACGAAGACCTTGATGGATCTGAAGATGAAGAGGTCAGCACTGCAAGGTCTCATCTGAATTATGGCAATCGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCAACAGTGATGTGAAACAGTTGAAAGTAAAGAAAATGGTGAGGAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACAGTCACCGTTCTGGACGAAGCTGTTAAATACTTGAAATCTCTGAAGGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAGCTAAGGCACAAGTAATGCCATCTGGTTGCATCAGCTGTAGAACTCTGTAAGGATTCTCTCATATCTTGTGTCTCTCCCTGCCACCTAGTACAAAATAAAAAGGTTAAAATGTTTCATGTCACAAAAGATTATTAGCGGCTTTTCTAAATGTTGTTTCGAGTTTCATATGCTTGCAGACGATGTGACTGTGGAACCAAGATTTCTTGTCAGGCTCCTGGACTATGTTAATTCATGTTTTACTTCGGTATCTAGAAGTTGAGGGATTGATCTGCCGTTTCTATTGGCATTTGTTGTATTTGCAGAAGGTTATCTATGATTCAAGACTGCCATGTACTTTTGAACGTCTATTTGTCAATCTATTCCATAATCCCCATCAATGGCTTCCTCATCTGTATTTGGAAATATTGAAAAGTCTCATAATATTCCTGTGGTTTCAGAGAATCTAGCTACAGAAAATTAAAATA ATGTTGATTAATACCATACGAATTAGACGTCTGAGAAGCTGTCTTGGAGGAAGAATGTTTTTCTTTTTGGTTTGTCGAAACAATGATCATTCACAGGCCTTGTATTCACTTGCCAATGATAGGAATTTCATGGGCTCTGCTGGATTTAACTTTTTCTGTTTTGGAAGGTTTAGTGATCATTTTACTGATCGCCCTTGGAAAAATATGACTGGGGGCAATTCAAACATTGAGTTTGTTGGTCTATCTTACTTTTGCGGTTGTTTCACTTTTATATTACTGGTTGGAGGAGTGAGAATGTGCATTGGTATAACGGGAAAGAGAAACAGAGCTGTCGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTAATGCAAGTTTGTCAGGCCGAGTATTTTCGCCAGTTGCTAAAGCCTGTCACGTAG MLINTIRIRRLRSCLGGRMFFFLVCRNNDHSQALYSLANDRNFMGSAGFNFFCFGRFSDHFTDRPWKNMTGGNSNIEFVGLSYFCGCFTFILLVGGVRMCIGITGKRNRAVEEIGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT Homology
BLAST of CaUC01G024030 vs. NCBI nr
Match: KAE8647743.1 (hypothetical protein Csa_002958 [Cucumis sativus]) HSP 1 Score: 94.7 bits (234), Expect = 6.8e-16 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
BLAST of CaUC01G024030 vs. NCBI nr
Match: PPR97774.1 (hypothetical protein GOBAR_AA22895 [Gossypium barbadense]) HSP 1 Score: 91.7 bits (226), Expect = 5.8e-15 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CaUC01G024030 vs. NCBI nr
Match: KAF4360142.1 (hypothetical protein F8388_000011, partial [Cannabis sativa]) HSP 1 Score: 89.4 bits (220), Expect = 2.9e-14 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of CaUC01G024030 vs. NCBI nr
Match: XP_020417230.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 [Prunus persica]) HSP 1 Score: 89.0 bits (219), Expect = 3.8e-14 Identity = 42/55 (76.36%), Postives = 50/55 (90.91%), Query Frame = 0
BLAST of CaUC01G024030 vs. NCBI nr
Match: PQQ06331.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 88.2 bits (217), Expect = 6.4e-14 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of CaUC01G024030 vs. ExPASy TrEMBL
Match: A0A2P5X359 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA22895 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.8e-15 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CaUC01G024030 vs. ExPASy TrEMBL
Match: A0A7J6ENW5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_000011 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of CaUC01G024030 vs. ExPASy TrEMBL
Match: A0A314YMT4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15784 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 3.1e-14 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of CaUC01G024030 vs. ExPASy TrEMBL
Match: A0A5B6U445 (Transcription factor bHLH144 OS=Gossypium australe OX=47621 GN=EPI10_034324 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 3.1e-14 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of CaUC01G024030 vs. ExPASy TrEMBL
Match: A0A251PKI6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G077000 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CaUC01G024030 vs. TAIR 10
Match: AT1G29951.1 (conserved peptide upstream open reading frame 35 ) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-09 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of CaUC01G024030 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 ) HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04 Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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