CaUC01G023510 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATCCCCGAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATACAACTCCAAAGGTTCAGAGAGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGACGCCACAGAATTTGGTTTTGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTAAGCTCTTCGGGTCAACTTTTCAATCAAACGGATTTGCATACGAAACTTCAGACAGTGTTGAATTCTCGTAGTAGAAGACATAATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTACCTCTCTTCTCTTTTGTTTCAAATTCAGATTTGATGCTTTGTTTTCAAATTGGGAACCTAAATTACCAAATAATGTCTTCATACATTCCTTTGGGTTTAGATTTAGAAGTGTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTCTGTGAGGAAAATCTGAAAGCTGTCATCTTTAGTGCTATGCTTCCATCTTTCCTTAATGGGGATGGATGA ATGTCCATCCCCGAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATACAACTCCAAAGGTTCAGAGAGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGACGCCACAGAATTTGGTTTTGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTAAGCTCTTCGGGTCAACTTTTCAATCAAACGGATTTGCATACGAAACTTCAGACAGTGTTGAATTCTCGTAGTAGAAGACATAATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTACCTCTCTTCTCTTTTGTTTCAAATTCAGATTTGATGCTTTGTTTTCAAATTGGGAACCTAAATTACCAAATAATGTCTTCATACATTCCTTTGGGTTTAGATTTAGAAGTGTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTCTGTGAGGAAAATCTGAAAGCTGTCATCTTTAGTGCTATGCTTCCATCTTTCCTTAATGGGGATGGATGA ATGTCCATCCCCGAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATACAACTCCAAAGGTTCAGAGAGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGACGCCACAGAATTTGGTTTTGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTAAGCTCTTCGGGTCAACTTTTCAATCAAACGGATTTGCATACGAAACTTCAGACAGTGTTGAATTCTCGTAGTAGAAGACATAATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTACCTCTCTTCTCTTTTGTTTCAAATTCAGATTTGATGCTTTGTTTTCAAATTGGGAACCTAAATTACCAAATAATGTCTTCATACATTCCTTTGGGTTTAGATTTAGAAGTGTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTCTGTGAGGAAAATCTGAAAGCTGTCATCTTTAGTGCTATGCTTCCATCTTTCCTTAATGGGGATGGATGA MSIPELPFSPSNFIATSNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFRVSCCLPLFSFVSNSDLMLCFQIGNLNYQIMSSYIPLGLDLEVCSLYVVGVLVLCEENLKAVIFSAMLPSFLNGDG Homology
BLAST of CaUC01G023510 vs. NCBI nr
Match: KAG7034657.1 (hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.0 bits (484), Expect = 8.4e-45 Identity = 108/172 (62.79%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of CaUC01G023510 vs. NCBI nr
Match: XP_038892892.1 (uncharacterized protein LOC120081796 [Benincasa hispida]) HSP 1 Score: 185.3 bits (469), Expect = 4.6e-43 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of CaUC01G023510 vs. NCBI nr
Match: KAE8647723.1 (hypothetical protein Csa_003961 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 1.7e-37 Identity = 86/103 (83.50%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of CaUC01G023510 vs. NCBI nr
Match: KAG6581370.1 (hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35 Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of CaUC01G023510 vs. NCBI nr
Match: KAG6594533.1 (hypothetical protein SDJN03_11086, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.6 bits (309), Expect = 1.6e-24 Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of CaUC01G023510 vs. ExPASy TrEMBL
Match: A0A0A0KLQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 6.9e-37 Identity = 86/103 (83.50%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of CaUC01G023510 vs. ExPASy TrEMBL
Match: A0A2I4H1I2 (uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CaUC01G023510 vs. ExPASy TrEMBL
Match: A0A2I4H1F6 (uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CaUC01G023510 vs. ExPASy TrEMBL
Match: A0A2I4H1H1 (uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CaUC01G023510 vs. ExPASy TrEMBL
Match: A0A6P6FRY9 (uncharacterized protein LOC107412288 OS=Ziziphus jujuba OX=326968 GN=LOC107412288 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18 Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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