CaUC01G022900 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G022900
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein E6
Location	Ciama_Chr01: 35119549 .. 35120391 (-)
RNA-Seq Expression	CaUC01G022900
Synteny	CaUC01G022900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCACCCAAATTACTCACTTCTATCCTCCTTCTAAGTCTTCTATTCATTCAAATCCATGCAAGAGACAGCAAGTACTTCTTCAGCAAAGTACCCAACAATGTTGATAACTTTGATACCAAAGAAACTCAAATCCCCAACAACAATGTTGATCCTTTAACAAATCCTGAAAAAACTACCACTACCCCACAAGACCAAGAGCCCAATTTCATCCCTCAAACCCAAGAAAACAGCTACGGTCTCTACGGTCACGAATCCGGTCAGCTCCCCCCTAATTCCGACGAAAAATTCTCCGGCAGTGGCCGCCCCTTTACCACCACCACCTACAACAACAATAACAACTACAGAAACGACGTCGTTCCTAATTACAAGTCCGAGTCAGAAGATCAGTACTACAGCTACAACGAGGACGACAACAACAAGAACGAGAATTTTGAAGATAGCAACTCAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATAGACAACAAAGGTTTCAAAACACCCGCCTTTCGCGAGATGATTACACCACAACTCCTTTATACGACCAAGGAAAATACGACAATTTCTACAGCAACAACAATAATAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACGAGATTCATGGAGAATGGAAAGTACTATTATGACCTCAACAGGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTCGGAAACAGCAACAACAACAATGGCAACACATACGAGTACGGTAATTCCATGGGAAGGTACCAGAATCAGAATGATGAAGCGGAATTCCAGGAGGAACCCGATGAGTTCGTCCCATAA

mRNA sequence

ATGGCTTCCTCACCCAAATTACTCACTTCTATCCTCCTTCTAAGTCTTCTATTCATTCAAATCCATGCAAGAGACAGCAAGTACTTCTTCAGCAAAGTACCCAACAATGTTGATAACTTTGATACCAAAGAAACTCAAATCCCCAACAACAATGTTGATCCTTTAACAAATCCTGAAAAAACTACCACTACCCCACAAGACCAAGAGCCCAATTTCATCCCTCAAACCCAAGAAAACAGCTACGGTCTCTACGGTCACGAATCCGGTCAGCTCCCCCCTAATTCCGACGAAAAATTCTCCGGCAGTGGCCGCCCCTTTACCACCACCACCTACAACAACAATAACAACTACAGAAACGACGTCGTTCCTAATTACAAGTCCGAGTCAGAAGATCAGTACTACAGCTACAACGAGGACGACAACAACAAGAACGAGAATTTTGAAGATAGCAACTCAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATAGACAACAAAGGTTTCAAAACACCCGCCTTTCGCGAGATGATTACACCACAACTCCTTTATACGACCAAGGAAAATACGACAATTTCTACAGCAACAACAATAATAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACGAGATTCATGGAGAATGGAAAGTACTATTATGACCTCAACAGGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTCGGAAACAGCAACAACAACAATGGCAACACATACGAGTACGGTAATTCCATGGGAAGGTACCAGAATCAGAATGATGAAGCGGAATTCCAGGAGGAACCCGATGAGTTCGTCCCATAA

Coding sequence (CDS)

ATGGCTTCCTCACCCAAATTACTCACTTCTATCCTCCTTCTAAGTCTTCTATTCATTCAAATCCATGCAAGAGACAGCAAGTACTTCTTCAGCAAAGTACCCAACAATGTTGATAACTTTGATACCAAAGAAACTCAAATCCCCAACAACAATGTTGATCCTTTAACAAATCCTGAAAAAACTACCACTACCCCACAAGACCAAGAGCCCAATTTCATCCCTCAAACCCAAGAAAACAGCTACGGTCTCTACGGTCACGAATCCGGTCAGCTCCCCCCTAATTCCGACGAAAAATTCTCCGGCAGTGGCCGCCCCTTTACCACCACCACCTACAACAACAATAACAACTACAGAAACGACGTCGTTCCTAATTACAAGTCCGAGTCAGAAGATCAGTACTACAGCTACAACGAGGACGACAACAACAAGAACGAGAATTTTGAAGATAGCAACTCAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAATAGACAACAAAGGTTTCAAAACACCCGCCTTTCGCGAGATGATTACACCACAACTCCTTTATACGACCAAGGAAAATACGACAATTTCTACAGCAACAACAATAATAATGCGAATAACGTGGTGCGACAAGGGATGAGCGACACGAGATTCATGGAGAATGGAAAGTACTATTATGACCTCAACAGGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTCGGAAACAGCAACAACAACAATGGCAACACATACGAGTACGGTAATTCCATGGGAAGGTACCAGAATCAGAATGATGAAGCGGAATTCCAGGAGGAACCCGATGAGTTCGTCCCATAA

Protein sequence

MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVPNNVDNFDTKETQIPNNNVDPLTNPEKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPFTTTTYNNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKNENFEDSNSKPYENSFYYNKDLYDNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYSNNNNNANNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP

Homology

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BLAST of CaUC01G022900 vs. NCBI nr
Match: XP_038883950.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 2.5e-123
Identity = 246/291 (84.54%), Postives = 260/291 (89.35%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVDNFDTKETQIPNNNVDPLTNPE 60
           MASSPKLLTSILLLSLL IQIHAR+SKYFFSKVP NNVDNFD KETQ+PNN +DPLTNPE
Sbjct: 1   MASSPKLLTSILLLSLLLIQIHARESKYFFSKVPNNNVDNFDAKETQLPNNKIDPLTNPE 60

Query: 61  KTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPF--TTTTYNNNNNY 120
           KTTTTPQDQEPNFIPQTQ+NSYGLYGHESGQLPPNSD KFSG GRPF  TTTTY+NNN Y
Sbjct: 61  KTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSDNKFSGGGRPFTTTTTTYDNNNYY 120

Query: 121 RNDVVPNYKSESEDQYYSYNEDDNNKNENFEDSNSKPYENSFYYNKDLYDNRQQRFQNTR 180
           RND VPN K ESE +YY+YN  +N+ NE FE+S SKPYENSFYYNKDLYDN QQ FQNTR
Sbjct: 121 RNDAVPNNKPESE-EYYNYN--NNDYNEYFENSKSKPYENSFYYNKDLYDNGQQSFQNTR 180

Query: 181 LSRDDYTTTPLYDQGKYDNFY--------SNNNNNANNVVRQGMSDTRFMENGKYYYDLN 240
           LS+DDY TTPLYDQGKYDNFY        SNNN+N NNVVRQGMSDTRFMENGKYYYDLN
Sbjct: 181 LSQDDY-TTPLYDQGKYDNFYSNNNGRGSSNNNDNGNNVVRQGMSDTRFMENGKYYYDLN 240

Query: 241 REPHHYSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP 281
           REPHHYSRSRGYFGN+NNNN NTYEYGNSMGRYQNQNDEAEFQEEP+EFVP
Sbjct: 241 REPHHYSRSRGYFGNNNNNNPNTYEYGNSMGRYQNQNDEAEFQEEPNEFVP 287

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BLAST of CaUC01G022900 vs. NCBI nr
Match: KAA0052668.1 (protein E6 [Cucumis melo var. makuwa] >TYK13157.1 protein E6 [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 4.2e-115
Identity = 235/302 (77.81%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-----NNVDNFDTKETQIPNN-NVDP 60
           MASSPKL TSIL+L+LLFIQIHAR+SKYFFSK+P     NN +NFD KETQIPN+ NVDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTNPEKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPFTTT 120
           LTNPEKTTT+PQDQ+PNFIPQTQ+N YGLYGHESGQLPPNSD KF       +GR FTTT
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TY--NNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDLY 180
           T   NN+N +RNDVV NYKSESE +YY+Y +++NN N + FE+SNSKPYENSFYYNKDLY
Sbjct: 121 TTYDNNDNKFRNDVVSNYKSESE-EYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLY 180

Query: 181 DNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS------NNNNNANNVVRQGMSDTRFME 240
           DN +Q FQNTRLSRDDYTTTPLYDQGKYDNFY+      +NNNN NN+VRQGMSDTRFME
Sbjct: 181 DNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNGGGDNNNNGNNMVRQGMSDTRFME 240

Query: 241 NGKYYYDLNREPHHYSRSRGYFGN--SNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEF 281
           NGKYYYDL+REPHHYSRSRGYFGN  +NNNN N+YEYGNSMGRYQNQNDEAEFQEEPDEF
Sbjct: 241 NGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEEPDEF 300

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BLAST of CaUC01G022900 vs. NCBI nr
Match: XP_008441080.1 (PREDICTED: protein E6 [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 4.2e-115
Identity = 237/303 (78.22%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVD-----NFDTKETQIPNN-NVD 60
           MASSPKL TSIL+L+LLFIQIHAR+SKYFFSK+P NNVD     NFD KETQIPN+ NVD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTNPEKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPFTT 120
           PLTNPEKTTT+PQDQ+PNFIPQTQ+N YGLYGHESGQLPPNSD KF       +GR FTT
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 TTY--NNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDL 180
           TT   NN+N +RNDVV NYKSESE +YY+Y +++NN N + FE+SNSKPYENSFYYNKDL
Sbjct: 121 TTTYDNNDNKFRNDVVSNYKSESE-EYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDL 180

Query: 181 YDNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS------NNNNNANNVVRQGMSDTRFM 240
           YDN +Q FQNTRLSRDDYTTTPLYDQGKYDNFY+      +NNNN NN+VRQGMSDTRFM
Sbjct: 181 YDNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNGGGDNNNNGNNMVRQGMSDTRFM 240

Query: 241 ENGKYYYDLNREPHHYSRSRGYFGN--SNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDE 281
           ENGKYYYDL+REPHHYSRSRGYFGN  +NNNN N+YEYGNSMGRYQNQNDEAEFQEEPDE
Sbjct: 241 ENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEEPDE 300

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BLAST of CaUC01G022900 vs. NCBI nr
Match: KAE8647698.1 (hypothetical protein Csa_002947 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 230/303 (75.91%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVD-NFDTKETQIPNN-NVDPLTN 60
           MASSP L TSIL+L+L F+QIHAR+SKYFFSK+P NNVD NFD KETQI N+  VDPLTN
Sbjct: 58  MASSPTLFTSILILTLFFLQIHARESKYFFSKIPNNNVDNNFDAKETQITNDEKVDPLTN 117

Query: 61  PEKTTTTPQ-DQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPF-TTTT 120
           PEKTTT+ Q +Q+PNFIPQTQ+N YGLYGHESGQLPPNS+ KF       +GR F TTTT
Sbjct: 118 PEKTTTSSQNNQQPNFIPQTQDNGYGLYGHESGQLPPNSNSKFFSQNGRENGRSFTTTTT 177

Query: 121 YN---NNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDLY 180
           YN   +NN ++NDVV NYKSESE +YY+Y+ED+NN N + FE+S SKPY+NSFYYNKDLY
Sbjct: 178 YNDDDDNNKFKNDVVSNYKSESE-EYYNYDEDNNNNNFQTFENSGSKPYKNSFYYNKDLY 237

Query: 181 DNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS--------NNNNNANNVVRQGMSDTRF 240
           DN +Q F N RLSRDDYTTTPLYDQGKYDNFYS        NNN+N NNVVRQGMSDTRF
Sbjct: 238 DNGRQSFPNARLSRDDYTTTPLYDQGKYDNFYSNNGDRNDNNNNDNGNNVVRQGMSDTRF 297

Query: 241 MENGKYYYDLNREPHHYSR-SRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDE 281
           MENGKYYYDLNREPHHYSR SRGYFGN+NNNNGN+Y+YGNSMGRYQNQNDEAEFQEEPDE
Sbjct: 298 MENGKYYYDLNREPHHYSRSSRGYFGNNNNNNGNSYQYGNSMGRYQNQNDEAEFQEEPDE 357

[Close]

BLAST of CaUC01G022900 vs. NCBI nr
Match: XP_004134947.1 (protein E6 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 230/303 (75.91%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVD-NFDTKETQIPNN-NVDPLTN 60
           MASSP L TSIL+L+L F+QIHAR+SKYFFSK+P NNVD NFD KETQI N+  VDPLTN
Sbjct: 1   MASSPTLFTSILILTLFFLQIHARESKYFFSKIPNNNVDNNFDAKETQITNDEKVDPLTN 60

Query: 61  PEKTTTTPQ-DQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPF-TTTT 120
           PEKTTT+ Q +Q+PNFIPQTQ+N YGLYGHESGQLPPNS+ KF       +GR F TTTT
Sbjct: 61  PEKTTTSSQNNQQPNFIPQTQDNGYGLYGHESGQLPPNSNSKFFSQNGRENGRSFTTTTT 120

Query: 121 YN---NNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDLY 180
           YN   +NN ++NDVV NYKSESE +YY+Y+ED+NN N + FE+S SKPY+NSFYYNKDLY
Sbjct: 121 YNDDDDNNKFKNDVVSNYKSESE-EYYNYDEDNNNNNFQTFENSGSKPYKNSFYYNKDLY 180

Query: 181 DNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS--------NNNNNANNVVRQGMSDTRF 240
           DN +Q F N RLSRDDYTTTPLYDQGKYDNFYS        NNN+N NNVVRQGMSDTRF
Sbjct: 181 DNGRQSFPNARLSRDDYTTTPLYDQGKYDNFYSNNGDRNDNNNNDNGNNVVRQGMSDTRF 240

Query: 241 MENGKYYYDLNREPHHYSR-SRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDE 281
           MENGKYYYDLNREPHHYSR SRGYFGN+NNNNGN+Y+YGNSMGRYQNQNDEAEFQEEPDE
Sbjct: 241 MENGKYYYDLNREPHHYSRSSRGYFGNNNNNNGNSYQYGNSMGRYQNQNDEAEFQEEPDE 300

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BLAST of CaUC01G022900 vs. ExPASy Swiss-Prot
Match: Q01197 (Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 115/286 (40.21%), Postives = 150/286 (52.45%), Query Frame = 0


Query: 1   MASSPKLLT-SILLLSLLF-IQIHARDSKYFFSKVPNNVDNFDTKETQIPNNNVDPLTNP 60
           MASSPKL + SIL L  LF +QIHAR+   +FSK P    N + KET       +  T  
Sbjct: 1   MASSPKLFSMSILFLFALFSMQIHARE---YFSKFPR--VNINEKETTTREQKHE--TFV 60

Query: 61  EKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPFTTTTYNNNNNYR 120
            +TT  P++QEP FIP+TQ N YGLYGHE            SGS RP  TT       Y 
Sbjct: 61  PQTTQKPEEQEPRFIPETQ-NGYGLYGHE------------SGSSRPSFTT----KETYE 120

Query: 121 NDVVPNYKSESEDQYYSYNEDDNNKNENFEDSNSKPYENSFYYNKDLYDNRQQRFQNTRL 180
             V P  +   ++ Y S  E  NNK             +++YYNK+ Y++ +Q+     L
Sbjct: 121 PYVTP-VRFHPDEPYNSIPESSNNK-------------DTYYYNKNAYESTKQQ----NL 180

Query: 181 SRDDYTTTPLYDQGKYDNFYSNNNNNANNVVRQGMSDTRFMENGKYYYDLNRE----PHH 240
               +T      +   +N Y N NN  NN  +QGMSDTR++ENGKYYYD+  E    P+ 
Sbjct: 181 GEAIFTEKGWSTKENQNNNYYNGNNGYNNGEKQGMSDTRYLENGKYYYDVKSENNYYPNR 238

Query: 241 YSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP 281
           +  SRG   + N  N N Y   N+MGRY +QN E EF+E  +EF P
Sbjct: 241 FDNSRG-VASRNEFNENRY---NNMGRY-HQNQE-EFEESEEEFEP 238

[Close]

BLAST of CaUC01G022900 vs. ExPASy Swiss-Prot
Match: Q54VM3 (TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum OX=44689 GN=tbc1d5A PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 67/247 (27.13%), Postives = 110/247 (44.53%), Query Frame = 0


Query: 35  NNVDNFDTKETQIPNN---NVDPLTNPEKTTTTPQDQEPNFIPQTQENSYG----LYGHE 94
           NN +N +     I NN   N +   N         +Q+ +F      ++YG    ++  E
Sbjct: 75  NNSNNSNNNNNNINNNNNRNNNNFNNNNNNNVNYFEQDVDFGENAHSSNYGDNNNIFSDE 134

Query: 95  SGQLPPNSDEKFSGSGRPFTTTTYNNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKNENF 154
           S     N+      +   +    Y +NNNY  +   NY +E+ +   + N ++NN N N 
Sbjct: 135 SNNYNNNN------NNNDYNNNNYYDNNNYNENYNENY-NENYNNNNNNNNNNNNNNNNN 194

Query: 155 EDSNSKPYENSFYYNKDLYDNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYSNNNNNANN 214
            ++N+    N+ YYN++  +N+QQ  QN   S ++Y    + +    DN Y+NNNNN NN
Sbjct: 195 NNNNNNNNNNNNYYNEN--NNQQQLQQN--YSNNNYNNEYINNFNNNDNSYNNNNNNNNN 254

Query: 215 VVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQND 274
                 S+     N    YD     +  S +  Y+ NSNNN+ N  +Y      YQ +  
Sbjct: 255 -----NSNFNNYNNNNNGYD---NSYSNSNNNNYYDNSNNNSKNDNQYNQQQQYYQEEEQ 302

[Close]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL
Match: A0A5D3CMI3 (Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.1e-115
Identity = 235/302 (77.81%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-----NNVDNFDTKETQIPNN-NVDP 60
           MASSPKL TSIL+L+LLFIQIHAR+SKYFFSK+P     NN +NFD KETQIPN+ NVDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTNPEKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPFTTT 120
           LTNPEKTTT+PQDQ+PNFIPQTQ+N YGLYGHESGQLPPNSD KF       +GR FTTT
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TY--NNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDLY 180
           T   NN+N +RNDVV NYKSESE +YY+Y +++NN N + FE+SNSKPYENSFYYNKDLY
Sbjct: 121 TTYDNNDNKFRNDVVSNYKSESE-EYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDLY 180

Query: 181 DNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS------NNNNNANNVVRQGMSDTRFME 240
           DN +Q FQNTRLSRDDYTTTPLYDQGKYDNFY+      +NNNN NN+VRQGMSDTRFME
Sbjct: 181 DNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNGGGDNNNNGNNMVRQGMSDTRFME 240

Query: 241 NGKYYYDLNREPHHYSRSRGYFGN--SNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEF 281
           NGKYYYDL+REPHHYSRSRGYFGN  +NNNN N+YEYGNSMGRYQNQNDEAEFQEEPDEF
Sbjct: 241 NGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEEPDEF 300

[Close]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL
Match: A0A1S3B2M6 (protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.1e-115
Identity = 237/303 (78.22%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVD-----NFDTKETQIPNN-NVD 60
           MASSPKL TSIL+L+LLFIQIHAR+SKYFFSK+P NNVD     NFD KETQIPN+ NVD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTNPEKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPFTT 120
           PLTNPEKTTT+PQDQ+PNFIPQTQ+N YGLYGHESGQLPPNSD KF       +GR FTT
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 TTY--NNNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDL 180
           TT   NN+N +RNDVV NYKSESE +YY+Y +++NN N + FE+SNSKPYENSFYYNKDL
Sbjct: 121 TTTYDNNDNKFRNDVVSNYKSESE-EYYNYEDNNNNNNFQTFENSNSKPYENSFYYNKDL 180

Query: 181 YDNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS------NNNNNANNVVRQGMSDTRFM 240
           YDN +Q FQNTRLSRDDYTTTPLYDQGKYDNFY+      +NNNN NN+VRQGMSDTRFM
Sbjct: 181 YDNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNGGGDNNNNGNNMVRQGMSDTRFM 240

Query: 241 ENGKYYYDLNREPHHYSRSRGYFGN--SNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDE 281
           ENGKYYYDL+REPHHYSRSRGYFGN  +NNNN N+YEYGNSMGRYQNQNDEAEFQEEPDE
Sbjct: 241 ENGKYYYDLDREPHHYSRSRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEFQEEPDE 300

[Close]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL
Match: A0A0A0KLJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518090 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.4e-109
Identity = 230/303 (75.91%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVP-NNVD-NFDTKETQIPNN-NVDPLTN 60
           MASSP L TSIL+L+L F+QIHAR+SKYFFSK+P NNVD NFD KETQI N+  VDPLTN
Sbjct: 1   MASSPTLFTSILILTLFFLQIHARESKYFFSKIPNNNVDNNFDAKETQITNDEKVDPLTN 60

Query: 61  PEKTTTTPQ-DQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSG-----SGRPF-TTTT 120
           PEKTTT+ Q +Q+PNFIPQTQ+N YGLYGHESGQLPPNS+ KF       +GR F TTTT
Sbjct: 61  PEKTTTSSQNNQQPNFIPQTQDNGYGLYGHESGQLPPNSNSKFFSQNGRENGRSFTTTTT 120

Query: 121 YN---NNNNYRNDVVPNYKSESEDQYYSYNEDDNNKN-ENFEDSNSKPYENSFYYNKDLY 180
           YN   +NN ++NDVV NYKSESE +YY+Y+ED+NN N + FE+S SKPY+NSFYYNKDLY
Sbjct: 121 YNDDDDNNKFKNDVVSNYKSESE-EYYNYDEDNNNNNFQTFENSGSKPYKNSFYYNKDLY 180

Query: 181 DNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYS--------NNNNNANNVVRQGMSDTRF 240
           DN +Q F N RLSRDDYTTTPLYDQGKYDNFYS        NNN+N NNVVRQGMSDTRF
Sbjct: 181 DNGRQSFPNARLSRDDYTTTPLYDQGKYDNFYSNNGDRNDNNNNDNGNNVVRQGMSDTRF 240

Query: 241 MENGKYYYDLNREPHHYSR-SRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDE 281
           MENGKYYYDLNREPHHYSR SRGYFGN+NNNNGN+Y+YGNSMGRYQNQNDEAEFQEEPDE
Sbjct: 241 MENGKYYYDLNREPHHYSRSSRGYFGNNNNNNGNSYQYGNSMGRYQNQNDEAEFQEEPDE 300

[Close]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL
Match: A0A6J1IU58 (protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 5.3e-95
Identity = 205/289 (70.93%), Postives = 234/289 (80.97%), Query Frame = 0


Query: 1   MASSPKLLTSILLLSLLFIQIHARDSKYFFSKVPNNVDNFDTKETQIPN--NNVDPLTNP 60
           MASS KL+ S LLL+LLFIQ+HAR+S +FFSKVPNN   F TKETQIPN     DPLTNP
Sbjct: 1   MASSTKLI-STLLLALLFIQVHARES-HFFSKVPNNGGTFYTKETQIPNKEEEEDPLTNP 60

Query: 61  EKTTTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPFTTTTYNNNNNYR 120
           +KT+ TPQD +PNF+PQTQ+N+YGLYGHESGQLPPNSD+ FSG  RP       ++N YR
Sbjct: 61  QKTSGTPQDHDPNFLPQTQDNNYGLYGHESGQLPPNSDDNFSGD-RP-------DDNKYR 120

Query: 121 NDVVPNYKSESEDQYYSYNEDDNNKNENFEDSNSKPYENSFYYNKDLYDNRQQRFQNTRL 180
            +   +YKSESE+ Y          N+NF++ N+KPYENSFYYNKDLYDN +Q F+NTRL
Sbjct: 121 RNDAVSYKSESEEFY---------DNDNFQNGNTKPYENSFYYNKDLYDNGRQSFRNTRL 180

Query: 181 SRDDYTTTPLYDQGKY-----DNFY--SNNNNNANNVVRQGMSDTRFMENGKYYYDLNRE 240
           SR+DYTTTPLY+Q KY     +NFY  SNNNNNANNVVRQGMSDTRFMENGKYYYDL+RE
Sbjct: 181 SRNDYTTTPLYNQEKYHDDDDNNFYYNSNNNNNANNVVRQGMSDTRFMENGKYYYDLDRE 240

Query: 241 PHHYSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP 281
           PHHYSRSRGYF  +NNNNGNTY+YGNSMGRYQNQNDEAEFQEE DEFVP
Sbjct: 241 PHHYSRSRGYFRTNNNNNGNTYKYGNSMGRYQNQNDEAEFQEELDEFVP 270

[Close]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL
Match: A0A6J1EH17 (protein E6-like OS=Cucurbita moschata OX=3662 GN=LOC111433304 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.2e-92
Identity = 202/284 (71.13%), Postives = 228/284 (80.28%), Query Frame = 0


Query: 8   LTSILLLSLLFIQIHARDSKYFFSKVPNNVDNFDTKETQIPNNNVDPLTNPEKTTTTP-- 67
           L S LLL+LLF Q+HAR+S +FFSKVPNN   F TKETQIPN   DPLT+P+KT+ TP  
Sbjct: 6   LISALLLALLFFQVHARES-HFFSKVPNNGGTFYTKETQIPNKAEDPLTSPQKTSGTPQD 65

Query: 68  QDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPFTTTTYNNNNNYRNDVVPNY 127
           QDQ+PNF+PQTQ+N+YGLYGHESGQLPPNSD+ FSG  RP      ++N   RND VP Y
Sbjct: 66  QDQDPNFLPQTQDNNYGLYGHESGQLPPNSDDNFSGD-RP------DDNKYRRNDAVP-Y 125

Query: 128 KSESEDQYYSYNEDDNNKNENFEDSNSKPYENSFYYNKDLYDNRQQRFQNTRLSRDDYTT 187
           KSESE+       DD   N+NF++SN+KPYENSFYYNKDLYDN +Q F+NTR SR+DYTT
Sbjct: 126 KSESEEY------DD---NDNFQNSNTKPYENSFYYNKDLYDNGRQSFRNTRFSRNDYTT 185

Query: 188 TPLYDQGKY---------DNFYSNNNNNANNVVRQGMSDTRFMENGKYYYDLNREPHHYS 247
           TPLY+Q KY         +NFY NNNNNANNVVRQGMSDTRFMENGKYYYDL+REPHHYS
Sbjct: 186 TPLYNQEKYHNDDHDDDNNNFYYNNNNNANNVVRQGMSDTRFMENGKYYYDLDREPHHYS 245

Query: 248 RSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP 281
           RSRGYF   NNNNGNTYEYGNSMGRYQNQNDEAEFQEE D+FVP
Sbjct: 246 RSRGYF--RNNNNGNTYEYGNSMGRYQNQNDEAEFQEELDDFVP 269

[Close]

BLAST of CaUC01G022900 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 101/326 (30.98%), Postives = 152/326 (46.63%), Query Frame = 0


Query: 7   LLTSILLLSLLFIQIHARDSKYFFSKVPNNVDNFDTKETQIPNNNVDPLTNPEKTTT--- 66
           LL     L LL  QIHARDS YFF K      + ++ + Q PN+ + PL   EKTT    
Sbjct: 9   LLFFFTTLVLLSTQIHARDS-YFFGKF-----HRESPKDQNPNSFI-PLETSEKTTVEES 68

Query: 67  ----TPQDQEPNFIPQTQENSYGLYGHESGQLPPNSD-EKFSG--------SGRPFTTTT 126
                 Q+Q+P F+P++  N YGLYGHE+     N + E+F+         + + F+T +
Sbjct: 69  VLNKKEQEQDPTFVPES-GNGYGLYGHETTYNNNNDNKEEFNNNNKNDEKVNSKTFSTPS 128

Query: 127 YNNNNNYRNDVVPNYKSESEDQ-YYSYNEDDNNKNENFEDSNSK-PYENSFY---YNKDL 186
            +      N+   NY  ++E+     YN ++ N N N  D+N K  + N+ Y   Y K+ 
Sbjct: 129 LSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYDENYAKEE 188

Query: 187 YDNRQQRFQNTRLSRDDYTTTPLYDQGKYDNFYSNNNNNA---------------NNVVR 246
           ++N      N     D+      + +   DN  +  N+NA               +N+ R
Sbjct: 189 FNNNNNN-NNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGTELERETPYKGYSHNLER 248

Query: 247 QGMSDTRFMENGKYYYDL---NREPHHYSRSR-----GYFGN---SNNNNGNTYEYGNS- 280
           QGMSDTRFME G YYYDL       H+Y +S      GY+ +     N    +Y YGN+ 
Sbjct: 249 QGMSDTRFMEKGSYYYDLYNDRNHGHYYRKSHSKSPAGYYSSPATETNYEQQSYSYGNNN 308

[Close]

BLAST of CaUC01G022900 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10
Identity = 95/287 (33.10%), Postives = 137/287 (47.74%), Query Frame = 0


Query: 2   ASSPKLLTSILLLSLLFIQIHARDSKYFFSKVPNNVDNFDTKETQIPNNNVDPLTNPEKT 61
           ++S  L   +L L L   QI AR+S Y F K        D KE Q PNN V   TN +K 
Sbjct: 4   STSSCLFFFLLTLVLFSTQISARNS-YSFGKFQRE----DPKE-QNPNNLVPIETNEKK- 63

Query: 62  TTTPQDQEPNFIPQTQENSYGLYGHESGQLPPNSDEKFSGSGRPFTTTTYNNNNNYRNDV 121
              P DQ P FIPQ+ EN YGLYGHE+     N++E+ + +        Y +N NY +  
Sbjct: 64  --EPDDQNPAFIPQS-ENGYGLYGHET---TDNNNEELNNN-------KYEDNVNYDDSF 123

Query: 122 VPNYKSE---SEDQYYSYNEDDNNKNENFEDS-NSKPYENSFYYNKDLYDN----RQQRF 181
                SE   +++ Y +Y E      E ++++ ++  YENS  Y  D  DN      + +
Sbjct: 124 STPSLSETAQTQESYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPYKGY 183

Query: 182 QNTRLSRDDYTTTPLYDQGKYDNFYSNNNNNANNVVRQGMSDTRFMENGKYYYDLNREPH 241
            N   S  +   T   ++ + +  Y   N   NNV RQGMSDTR+M NGKYYYDL+ + +
Sbjct: 184 SNKDTSYYENPNTYGTEKREKEPAYRGYN---NNVERQGMSDTRYMANGKYYYDLDDDRN 243

Query: 242 HYSRSRGYFGNSNNNNGNTYEYGNSMGRYQNQNDEAEFQEEPDEFVP 281
           H    + ++ N      N  +         NQ  E   +E+ D+  P
Sbjct: 244 HGRFYQNHYYNYKPTGYNEKKSNFKNPYDSNQQSEMLGEEQGDQITP 267

The following BLAST results are available for this feature:

BLAST of CaUC01G022900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883950.1	2.5e-123	84.54	protein E6-like [Benincasa hispida]	[more]
KAA0052668.1	4.2e-115	77.81	protein E6 [Cucumis melo var. makuwa] >TYK13157.1 protein E6 [Cucumis melo var. ...	[more]
XP_008441080.1	4.2e-115	78.22	PREDICTED: protein E6 [Cucumis melo]	[more]
KAE8647698.1	1.3e-108	75.91	hypothetical protein Csa_002947 [Cucumis sativus]	[more]
XP_004134947.1	1.3e-108	75.91	protein E6 [Cucumis sativus]	[more]

BLAST of CaUC01G022900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01197	1.8e-23	40.21	Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1	[more]
Q54VM3	2.4e-04	27.13	TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum OX=44689 GN=tb...	[more]

BLAST of CaUC01G022900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CMI3	2.1e-115	77.81	Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE...	[more]
A0A1S3B2M6	2.1e-115	78.22	protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1	[more]
A0A0A0KLJ0	6.4e-109	75.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518090 PE=4 SV=1	[more]
A0A6J1IU58	5.3e-95	70.93	protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111478608 PE=4 SV=1	[more]
A0A6J1EH17	4.2e-92	71.13	protein E6-like OS=Cucurbita moschata OX=3662 GN=LOC111433304 PE=4 SV=1	[more]

BLAST of CaUC01G022900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28400.1	1.4e-12	30.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G33850.1	1.4e-10	33.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..131
None	No IPR available	PANTHER	PTHR35274:SF2	E6-LIKE PROTEIN	coord: 1..280
IPR040290	Protein E6-like	PANTHER	PTHR35274	E6-LIKE PROTEIN	coord: 1..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G022900.1	CaUC01G022900.1	mRNA