CaUC01G022700 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G022700
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S5
Location	Ciama_Chr01: 34978767 .. 34980984 (-)
RNA-Seq Expression	CaUC01G022700
Synteny	CaUC01G022700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTATCATTTATCCACTTGACCACATTGAAACGACGTCGTTGCGACCGAGTTTCTTCACTCATAATTCCTCTTCTTCTTACCCGTGTAGAGTCGATTGGGGATAAGCCTCCATCTCTGAACCCACAAACCTTCTCAATCCTTCCCCCTTCCTTCCTTCCTTCAATGGCATCTTCAACTCTCGTCCCCATTTCCTTTCTTTCCCTGCGCTCTTCTCCCTCCCATCGCCTCTCCATTCCACTATTTAAGCCTTTCACCGTCCTCCACTCTGCCCTATCCATAACCCCAATCTCCTCCTCCTCCTCCTCCATTCTCTATGTAACTCGAGCCAAATCCTCCGACATCGACACCACCTTCTTCGACAACGTAAATCCCCAAGAAGACATCTTTTACGATCCCCCCGAAGTCCCCGAAGGCTTCGTCCCCCCTCCCTCCTTCGACGAGGGCCCTCTAGAAAGCGAGGAAGACATCGCCGCCGCTTACGAGGAGATCTATGGCCCGGCTTATAGTGGAGTCAGTGTTCTGGGAAACGACATTTATGTAATGGATTCTAAGGTCAAGAAAGTGGGCGGATTCGGCTCAAAGGTCAAGAAGGACAAGCCCCGGGACGGGTTCGATGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTGGGTGTTGGTGTCGGTAAAGCTAAAGAAGTCATCGCCGCTGTTCAGAAATCGGCAGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAATACCTAACATTCCCCCACAGGTTCGTGGTTTTATTTTCTATTTACAAACTGGAATTGTTAGGCTTATTTTCGGATTTTGGGCGATAGGTTACTGTACTAGGCTACTAGCTCCTTTGTTAAGCCTTTGGTTTGCTGATAATGGGAATGCATTCAATTAGGAATATGGGACATAAACCCAATTTGTTAATAAGATAGTCATTACCATTTCAAAGGTGGATGGTTCAATCCCACCTCCTCAATGGGATTTAAGGAAAAGTAGAATTGGATGAGTATTTTGATTTACAGGAATGTTTTACTCCACTCTCTGTTGATTACTCCAAAATTGGTATGGCAACCCTAGAGGGGGTGAATAGGGTTGGGCCCAATTAAGCGAATTAAAAATTAATTAATTTGAGATTAAGGGCCAAAAAGCCAACACTTGCTACAAGCTTTGTTTTAAGTTAGTTAATACGAATTTTGTAGTCTGTAGGCAGTTTGAACTTTGAATCCTCATTGCAAACTTGGTCATTGGAGGTATTTGGTGCTTCTGTGGTTGAGTTTTGTTGATGTTCTTAGTTGTCTATTGTATGACTTGGTATATTTCACAGTTTTGTCTAGAGTCTGCTACCATTAGGCTGTGGAGAACTTGTCTTTCCAAAATGCTTTCCCTTTTAGATGTAAATGTAAAGAGTTAAAAGTATAGCAGATCTCCAGGAAGCGAGAAGCTAAATCAAACTCAATTTTTTTTCTATGAGAAAAGGAAGCTTCAAATTATGAATGCTAGTGAAGTAATATATCAGTCACATCTTGGGTTGCCGTGTGTTACTGTAAATGTTAGCTAAGGAGAGAGTGGAAAATTGTAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTAAGACCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAACTTGGAAGTAACAATGCCCTCAACAATGCCAGAGCGACAGTGGTTGCCGTGCAGAAGATGAAACAATTTAGGGAGGTCGCACAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGAAGAGGGAAAGGGTGAGACTTATTTTTCTTTTGTCTCATTTTTTGCTTTGACGTATATTAGTGCATCTATTCTTGTAAGTCAGTGTTGTAAAAACGACAGTCAGGCTTCATTCCTTTGTTTCTTATTTCTCTCCTTACAACATATTGAGAAAGCTTTGAAAGGCAAGTATATCTTTTTGGTCTGTTGCTTCACTCTGTAGATGGCTTTTATAACAATGTTAGAATGTTGAAGAACAGTGTATTAAGTTTTTAACTTGGGTGTGGGCAGAGTCTAGGCTATCTGAGATAGTTGTACAAGTCAAACCCCA

mRNA sequence

ATGGAATTATCATTTATCCACTTGACCACATTGAAACGACGTCGTTGCGACCGAGTTTCTTCACTCATAATTCCTCTTCTTCTTACCCGTGTAGAGTCGATTGGGGATAAGCCTCCATCTCTGAACCCACAAACCTTCTCAATCCTTCCCCCTTCCTTCCTTCCTTCAATGGCATCTTCAACTCTCGTCCCCATTTCCTTTCTTTCCCTGCGCTCTTCTCCCTCCCATCGCCTCTCCATTCCACTATTTAAGCCTTTCACCGTCCTCCACTCTGCCCTATCCATAACCCCAATCTCCTCCTCCTCCTCCTCCATTCTCTATGTAACTCGAGCCAAATCCTCCGACATCGACACCACCTTCTTCGACAACGTAAATCCCCAAGAAGACATCTTTTACGATCCCCCCGAAGTCCCCGAAGGCTTCGTCCCCCCTCCCTCCTTCGACGAGGGCCCTCTAGAAAGCGAGGAAGACATCGCCGCCGCTTACGAGGAGATCTATGGCCCGGCTTATAGTGGAGTCAGTGTTCTGGGAAACGACATTTATGTAATGGATTCTAAGGTCAAGAAAGTGGGCGGATTCGGCTCAAAGGTCAAGAAGGACAAGCCCCGGGACGGGTTCGATGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTGGGTGTTGGTGTCGGTAAAGCTAAAGAAGTCATCGCCGCTGTTCAGAAATCGGCAGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAATACCTAACATTCCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTAAGACCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAACTTGGAAGTAACAATGCCCTCAACAATGCCAGAGCGACAGTGGTTGCCGTGCAGAAGATGAAACAATTTAGGGAGGTCGCACAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGAAGAGGGAAAGGGTGAGACTTATTTTTCTTTTGTCTCATTTTTTGCTTTGACGTATATTAGTGCATCTATTCTTGTAAGTCAGTGTTGTAAAAACGACAGTCAGGCTTCATTCCTTTGTTTCTTATTTCTCTCCTTACAACATATTGAGAAAGCTTTGAAAGGCAAGTATATCTTTTTGGTCTGTTGCTTCACTCTGTAGATGGCTTTTATAACAATGTTAGAATGTTGAAGAACAGTGTATTAAGTTTTTAACTTGGGTGTGGGCAGAGTCTAGGCTATCTGAGATAGTTGTACAAGTCAAACCCCA

Coding sequence (CDS)

ATGGAATTATCATTTATCCACTTGACCACATTGAAACGACGTCGTTGCGACCGAGTTTCTTCACTCATAATTCCTCTTCTTCTTACCCGTGTAGAGTCGATTGGGGATAAGCCTCCATCTCTGAACCCACAAACCTTCTCAATCCTTCCCCCTTCCTTCCTTCCTTCAATGGCATCTTCAACTCTCGTCCCCATTTCCTTTCTTTCCCTGCGCTCTTCTCCCTCCCATCGCCTCTCCATTCCACTATTTAAGCCTTTCACCGTCCTCCACTCTGCCCTATCCATAACCCCAATCTCCTCCTCCTCCTCCTCCATTCTCTATGTAACTCGAGCCAAATCCTCCGACATCGACACCACCTTCTTCGACAACGTAAATCCCCAAGAAGACATCTTTTACGATCCCCCCGAAGTCCCCGAAGGCTTCGTCCCCCCTCCCTCCTTCGACGAGGGCCCTCTAGAAAGCGAGGAAGACATCGCCGCCGCTTACGAGGAGATCTATGGCCCGGCTTATAGTGGAGTCAGTGTTCTGGGAAACGACATTTATGTAATGGATTCTAAGGTCAAGAAAGTGGGCGGATTCGGCTCAAAGGTCAAGAAGGACAAGCCCCGGGACGGGTTCGATGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTGGGTGTTGGTGTCGGTAAAGCTAAAGAAGTCATCGCCGCTGTTCAGAAATCGGCAGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAATACCTAACATTCCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTAAGACCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAACTTGGAAGTAACAATGCCCTCAACAATGCCAGAGCGACAGTGGTTGCCGTGCAGAAGATGAAACAATTTAGGGAGGTCGCACAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGA

Protein sequence

MELSFIHLTTLKRRRCDRVSSLIIPLLLTRVESIGDKPPSLNPQTFSILPPSFLPSMASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDIDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVLGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELWK

Homology

[Close]

BLAST of CaUC01G022700 vs. NCBI nr
Match: XP_038883765.1 (30S ribosomal protein S5, chloroplastic [Benincasa hispida])

HSP 1 Score: 543.1 bits (1398), Expect = 1.8e-150
Identity = 289/307 (94.14%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSS-ILYVTRAKSSD 116
           MASSTLVPIS LSLRSSPSHRL IPLFKPFTVLHSA+S+ PISSSSSS IL  T  KSSD
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVSVPPISSSSSSFILSATPPKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
           IDTTFFDNV PQED+ YDPPEVPEGFVPPPSFDEGP ESE++IAAAYEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVTPQEDVVYDPPEVPEGFVPPPSFDEGPPESEDEIAAAYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKKVGGFGSK KKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKVGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. NCBI nr
Match: XP_004134699.1 (30S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ribosomal protein S5, chloroplastic [Cucumis sativus] >KAE8647691.1 hypothetical protein Csa_004214 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 6.8e-150
Identity = 286/307 (93.16%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPI-SSSSSSILYVTRAKSSD 116
           MASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS + + PI SSSSSSIL  TRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFLLPISSSSSSSILSATRAKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
           IDTTFFDNVNPQEDI YDPPEVPEGFVPPPSFDEGP+E+EE+IAA YEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKK GGFGSK KKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVI AVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. NCBI nr
Match: KAA0052681.1 (30S ribosomal protein S5 [Cucumis melo var. makuwa] >TYK13143.1 30S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 538.1 bits (1385), Expect = 5.8e-149
Identity = 285/307 (92.83%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPI-SSSSSSILYVTRAKSSD 116
           MASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS +S+  I SSSSSSIL  TRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
           IDTTFFDNVNP EDI +DPPEVPEGFVPPPSFDEGP+E+EE+IAAAYEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. NCBI nr
Match: XP_008439845.1 (PREDICTED: 30S ribosomal protein S5, chloroplastic [Cucumis melo] >XP_008439846.1 PREDICTED: 30S ribosomal protein S5, chloroplastic [Cucumis melo])

HSP 1 Score: 536.2 bits (1380), Expect = 2.2e-148
Identity = 284/307 (92.51%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPI-SSSSSSILYVTRAKSSD 116
           MASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS +S+  I SSSSSSIL  TRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
            DTTFFDNVNP EDI +DPPEVPEGFVPPPSFDEGP+E+EE+IAAAYEEIYGPAYSGVSV
Sbjct: 61  TDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. NCBI nr
Match: XP_022142374.1 (30S ribosomal protein S5, chloroplastic [Momordica charantia])

HSP 1 Score: 521.2 bits (1341), Expect = 7.3e-144
Identity = 279/306 (91.18%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDI 116
           MASSTLVPIS LSLRSSPSHRL I   KPFTVLHSALS+ PI  SSSSIL   RAKSSDI
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPI--SSSSILAPIRAKSSDI 60

Query: 117 DTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVL 176
           DTTFFDNV P++D+ YDPPEVPEGFV PPSFDEGPLE+EE+IAAAYEEIYGPAYSGVSVL
Sbjct: 61  DTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVL 120

Query: 177 GNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 236
           GNDI+VMDSKVKKVGGFGSK KKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 237 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 296
           KQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPAS
Sbjct: 181 KQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPAS 240

Query: 297 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIP 356
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFREVAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIP 300

Query: 357 MEELWK 363
           MEELWK
Sbjct: 301 MEELWK 304

[Close]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot
Match: Q9ST69 (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=1 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.2e-108
Identity = 207/288 (71.88%), Postives = 239/288 (82.99%), Query Frame = 0


Query: 80  IPLFKPFTVLHSALS-----ITPISSSSSSILYVTRAKSSDIDTTFFDNVNPQEDIFYDP 139
           IPLF   T L S  S        +SS+ S   ++   K  DID TFF+  NP E+I +DP
Sbjct: 21  IPLFPTTTTLLSLSSSSKPLFLSLSSTRSFPTHLYCIKKDDIDITFFEQDNPDEEITFDP 80

Query: 140 PEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVLGNDIYVMDSKVKKVGGFG 199
           PE PEG++PP + DE P ESEE+IA AYEE+YG AYSG S+LGND+Y MDSK+KK  GFG
Sbjct: 81  PEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLLGNDVYAMDSKIKKATGFG 140

Query: 200 SKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAA 259
           SK KK+K RDGF+E VVQVRRVTKVVKGGK + FRAIVVVGDK+GQVGVGVGKAKEV++A
Sbjct: 141 SKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSA 200

Query: 260 VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 319
           VQK+AV+ARRNI+TVPMTKYLTFPHR+E DYGAA+VMLRPA+PGTGVIAGGAVR VLEMA
Sbjct: 201 VQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRPAAPGTGVIAGGAVRTVLEMA 260

Query: 320 GVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELWK 363
           GVENALGKQLGSNNALNNARAT+VAVQ M+QF +VA++RGIPMEELWK
Sbjct: 261 GVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRGIPMEELWK 308

[Close]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot
Match: P93014 (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.3e-106
Identity = 214/306 (69.93%), Postives = 244/306 (79.74%), Query Frame = 0


Query: 59  SSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDIDT 118
           +S L  +S LSL +  S  +S    K      S +S +   +   S L + +A S+D +T
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTK------SIVSFSSFLNRRFSSLTLVKASSTDTET 63

Query: 119 TFFDNVNPQ--EDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVL 178
            FF++  P+   ++ +DPP  PEGFV PP FDEG  E+EE+IA A+EE+YGPAYSG S+L
Sbjct: 64  IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESML 123

Query: 179 GNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 238
           G DIYVMDSK KK  G G K KKDK RDGF+ERVVQVRRVTKVVKGGKQL FRAIVVVGD
Sbjct: 124 GKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD 183

Query: 239 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 298
           KQG VGVG  KAKEV+AAVQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPAS
Sbjct: 184 KQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPAS 243

Query: 299 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIP 358
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFR+VAQERGIP
Sbjct: 244 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIP 303

Query: 359 MEELWK 363
           MEELWK
Sbjct: 304 MEELWK 303

[Close]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot
Match: Q1XDJ0 (30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-47
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 196 KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAA 255
           K  K K +D G++ERVVQV+RVTKVVKGGK+L FR I+V+G++QGQVGVGVGKA +VI A
Sbjct: 6   KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGA 65

Query: 256 VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 315
           V+K   +A++++VTVP+TK  + PH   G  GAAKV+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 316 GVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 362
           GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLY 172

[Close]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot
Match: P51298 (30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-47
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 196 KVKKDKPRD-GFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAA 255
           K  K K +D G++ERVVQV+RVTKVVKGGK+L FR I+VVG++QGQVGVGVGKA +VI A
Sbjct: 6   KQGKSKEKDNGWEERVVQVKRVTKVVKGGKKLSFRVILVVGNEQGQVGVGVGKASDVIGA 65

Query: 256 VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 315
           V+K   +A++++VTVP+TK  + PH   G  GAA+V+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAQVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 316 GVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 362
           GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIENLY 172

[Close]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot
Match: Q31L23 (30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsE PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46
Identity = 98/178 (55.06%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 184 DSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGV 243
           + K KK        ++ +    + ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGV
Sbjct: 3   EEKDKKQSSRRRNNRRTEKESEWQERVVQIRRVTKVVKGGKKLSFRAIVIVGNERGQVGV 62

Query: 244 GVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIA 303
           GVGKA +VI AV+K   + ++++V VP+T+  + PH S G+ GAA+V++RPA+PGTGVIA
Sbjct: 63  GVGKASDVIGAVRKGVADGKKHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIA 122

Query: 304 GGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 362
           GGAVR VLE+AGV+N L K+LGS + LNNARA + A+  ++ F+EVAQ R IP+E+L+
Sbjct: 123 GGAVRTVLELAGVKNVLAKRLGSKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQLY 180

[Close]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL
Match: A0A0A0KK69 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 300/328 (91.46%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 36  DKPPSLNPQTFSILPPSFLPSMASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSI 95
           DKPPS NPQTFSI      PSMASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS + +
Sbjct: 31  DKPPSPNPQTFSI-----FPSMASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFL 90

Query: 96  TPI-SSSSSSILYVTRAKSSDIDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLES 155
            PI SSSSSSIL  TRAKSSDIDTTFFDNVNPQEDI YDPPEVPEGFVPPPSFDEGP+E+
Sbjct: 91  LPISSSSSSSILSATRAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIET 150

Query: 156 EEDIAAAYEEIYGPAYSGVSVLGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVR 215
           EE+IAA YEEIYGPAYSGVSVLGNDIYVMDSKVKK GGFGSK KKDKPRDGFDERVVQVR
Sbjct: 151 EEEIAAGYEEIYGPAYSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVR 210

Query: 216 RVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKY 275
           RVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI AVQKSAVNARRNIVTVPMTKY
Sbjct: 211 RVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKY 270

Query: 276 LTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNAR 335
           LTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNAR
Sbjct: 271 LTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNAR 330

Query: 336 ATVVAVQKMKQFREVAQERGIPMEELWK 363
           ATVVAVQKMKQFR+VAQERGIPMEELWK
Sbjct: 331 ATVVAVQKMKQFRDVAQERGIPMEELWK 353

[Close]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL
Match: A0A5D3CMJ7 (30S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007540 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.8e-149
Identity = 285/307 (92.83%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPI-SSSSSSILYVTRAKSSD 116
           MASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS +S+  I SSSSSSIL  TRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
           IDTTFFDNVNP EDI +DPPEVPEGFVPPPSFDEGP+E+EE+IAAAYEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL
Match: A0A1S3AZA3 (30S ribosomal protein S5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484514 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 1.1e-148
Identity = 284/307 (92.51%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPI-SSSSSSILYVTRAKSSD 116
           MASSTLVPIS +SLRSSPSHRLSIPLFKPF +LHS +S+  I SSSSSSIL  TRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 117 IDTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSV 176
            DTTFFDNVNP EDI +DPPEVPEGFVPPPSFDEGP+E+EE+IAAAYEEIYGPAYSGVSV
Sbjct: 61  TDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 177 LGNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 236
           LGNDIYVMDSKVKK GGFGSK KK+KPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 237 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 296
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 297 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGI 356
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 357 PMEELWK 363
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL
Match: A0A6J1CLD7 (30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012511 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.6e-144
Identity = 279/306 (91.18%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDI 116
           MASSTLVPIS LSLRSSPSHRL I   KPFTVLHSALS+ PI  SSSSIL   RAKSSDI
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPI--SSSSILAPIRAKSSDI 60

Query: 117 DTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVL 176
           DTTFFDNV P++D+ YDPPEVPEGFV PPSFDEGPLE+EE+IAAAYEEIYGPAYSGVSVL
Sbjct: 61  DTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVL 120

Query: 177 GNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 236
           GNDI+VMDSKVKKVGGFGSK KKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 237 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 296
           KQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPAS
Sbjct: 181 KQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPAS 240

Query: 297 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIP 356
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFREVAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIP 300

Query: 357 MEELWK 363
           MEELWK
Sbjct: 301 MEELWK 304

[Close]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL
Match: A0A6J1EMC0 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433861 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.6e-141
Identity = 270/306 (88.24%), Postives = 285/306 (93.14%), Query Frame = 0


Query: 57  MASSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDI 116
           MASSTLVPISF  +RSSP HRL IP  KPF+ +HSALS+ PI   SSSIL  TR KSSDI
Sbjct: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPI---SSSILSATRVKSSDI 60

Query: 117 DTTFFDNVNPQEDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVL 176
           DTTFFD  NP ED  YDPPEVPEGFV PPSFDEGPLESE++IAAAYEE+YGPAYSGVSVL
Sbjct: 61  DTTFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVL 120

Query: 177 GNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 236
           GNDIYVMDSK+KK+GGFGSK+KKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 237 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 296
           K+GQVGVGVGKAKEVI+AVQKSA+NARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS
Sbjct: 181 KKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240

Query: 297 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIP 356
           PGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATVVAVQKMKQFREVAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIP 300

Query: 357 MEELWK 363
           MEELWK
Sbjct: 301 MEELWK 303

[Close]

BLAST of CaUC01G022700 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 385.6 bits (989), Expect = 4.5e-107
Identity = 214/306 (69.93%), Postives = 244/306 (79.74%), Query Frame = 0


Query: 59  SSTLVPISFLSLRSSPSHRLSIPLFKPFTVLHSALSITPISSSSSSILYVTRAKSSDIDT 118
           +S L  +S LSL +  S  +S    K      S +S +   +   S L + +A S+D +T
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTK------SIVSFSSFLNRRFSSLTLVKASSTDTET 63

Query: 119 TFFDNVNPQ--EDIFYDPPEVPEGFVPPPSFDEGPLESEEDIAAAYEEIYGPAYSGVSVL 178
            FF++  P+   ++ +DPP  PEGFV PP FDEG  E+EE+IA A+EE+YGPAYSG S+L
Sbjct: 64  IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESML 123

Query: 179 GNDIYVMDSKVKKVGGFGSKVKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 238
           G DIYVMDSK KK  G G K KKDK RDGF+ERVVQVRRVTKVVKGGKQL FRAIVVVGD
Sbjct: 124 GKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD 183

Query: 239 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 298
           KQG VGVG  KAKEV+AAVQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPAS
Sbjct: 184 KQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPAS 243

Query: 299 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERGIP 358
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFR+VAQERGIP
Sbjct: 244 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIP 303

Query: 359 MEELWK 363
           MEELWK
Sbjct: 304 MEELWK 303

[Close]

BLAST of CaUC01G022700 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 79.3 bits (194), Expect = 6.9e-15
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 198 KKDKP--RDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAV 257
           KK +P  R G+D  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   +A+
Sbjct: 348 KKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAM 407

Query: 258 QKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 317
           QK+     +N+  V   +  T  H  +  Y   K+ L PA   TG+ AG  V+ +L +AG
Sbjct: 408 QKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAG 467

Query: 318 VENALGKQLGSNNALNNARATVVAVQKMKQFREVAQERG 355
            +N   K +GS N+ N  +A + A+  ++  ++V ++ G
Sbjct: 468 FKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFG 506

[Close]

BLAST of CaUC01G022700 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 5.4e-12
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 208 ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIV 267
           + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++V
Sbjct: 97  DEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVV 156

Query: 268 TV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 327
            V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++  
Sbjct: 157 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVF 216

Query: 328 GKQLGSNNALNN-ARATVVAVQKMKQF 347
               GS   L N  +AT   +QK   F
Sbjct: 217 TSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of CaUC01G022700 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 5.4e-12
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 208 ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIV 267
           + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++V
Sbjct: 97  DEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVV 156

Query: 268 TV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 327
            V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++  
Sbjct: 157 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVF 216

Query: 328 GKQLGSNNALNN-ARATVVAVQKMKQF 347
               GS   L N  +AT   +QK   F
Sbjct: 217 TSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of CaUC01G022700 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 5.4e-12
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 208 ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIV 267
           + V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++V
Sbjct: 97  DEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVV 156

Query: 268 TV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 327
            V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++  
Sbjct: 157 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVF 216

Query: 328 GKQLGSNNALNN-ARATVVAVQKMKQF 347
               GS   L N  +AT   +QK   F
Sbjct: 217 TSSRGSTKTLGNFVKATFDCLQKTYGF 243

The following BLAST results are available for this feature:

BLAST of CaUC01G022700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883765.1	1.8e-150	94.14	30S ribosomal protein S5, chloroplastic [Benincasa hispida]	[more]
XP_004134699.1	6.8e-150	93.16	30S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ri...	[more]
KAA0052681.1	5.8e-149	92.83	30S ribosomal protein S5 [Cucumis melo var. makuwa] >TYK13143.1 30S ribosomal pr...	[more]
XP_008439845.1	2.2e-148	92.51	PREDICTED: 30S ribosomal protein S5, chloroplastic [Cucumis melo] >XP_008439846....	[more]
XP_022142374.1	7.3e-144	91.18	30S ribosomal protein S5, chloroplastic [Momordica charantia]	[more]

BLAST of CaUC01G022700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ST69	5.2e-108	71.88	30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=...	[more]
P93014	6.3e-106	69.93	30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 ...	[more]
Q1XDJ0	1.0e-47	59.28	30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=...	[more]
P51298	3.0e-47	59.28	30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=...	[more]
Q31L23	1.1e-46	55.06	30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805...	[more]

BLAST of CaUC01G022700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK69	1.4e-156	91.46	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=...	[more]
A0A5D3CMJ7	2.8e-149	92.83	30S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AZA3	1.1e-148	92.51	30S ribosomal protein S5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484514 ...	[more]
A0A6J1CLD7	3.6e-144	91.18	30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1EMC0	1.6e-141	88.24	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CaUC01G022700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33800.1	4.5e-107	69.93	Ribosomal protein S5 family protein	[more]
AT1G64880.1	6.9e-15	32.08	Ribosomal protein S5 family protein	[more]
AT1G58983.1	5.4e-12	31.97	Ribosomal protein S5 family protein	[more]
AT1G59359.1	5.4e-12	31.97	Ribosomal protein S5 family protein	[more]
AT1G58380.1	5.4e-12	31.97	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.20		coord: 201..267 e-value: 4.0E-23 score: 83.0
None	No IPR available	PANTHER	PTHR13718:SF94	30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC	coord: 62..362
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 203..271
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 273..361 e-value: 1.4E-27 score: 97.1
IPR005712	Ribosomal protein S5, bacterial-type	TIGRFAM	TIGR01021	TIGR01021	coord: 205..359 e-value: 5.1E-59 score: 196.5
IPR005712	Ribosomal protein S5, bacterial-type	HAMAP	MF_01307_B	Ribosomal_S5_B	coord: 183..359 score: 32.358582
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 283..353 e-value: 1.6E-25 score: 88.3
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 206..270 e-value: 3.5E-23 score: 81.4
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 206..269 score: 24.91679
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 62..362
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 223..255
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 276..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G022700.1	CaUC01G022700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding