CaUC01G019150 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G019150
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Ciama_Chr01: 32289717 .. 32290638 (+)
RNA-Seq Expression	CaUC01G019150
Synteny	CaUC01G019150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTAAGCTAGATTATAGTTTGTACATGTTTGAAAGATGAGGACTCCGGATGTCGTTTCGTGGATGACAATTGTAATGACATACGTTCAAATGGGTAAGGAGGAATGTCGGCTTCAAGCATTTAGAATAATGTAGGAAAGCAATGTGATTCCAAATGAATATACATTTGCTGCTGTTATCTCTGGTTGTGCTAATCTTGCAAGGTTGACGTGGGGGGAACAACTACATGCTCATGTTTTATGTGTTGGGTTTCTGACTGTATTGTCAGTTGCTAACTCTATCATGACCATGTACACAAAATGTGGGGAGTTAGCTTCAGTTTCAAAGGTATTTTGTTCAATGAATTTTAGAGACATCATTACTTGGAGCACTATTATTGCAGCATATTCTCAAGTAGGCTATGGTGAAGAAGCTTTTGAGTATCTGTCACGGATGAGAAGTGGAGGACCCAAACCAAATGAGTTCGCCCTGCCTAGCGTGCTGAGTGTATGTGGAAGTATGGCAATTCTTGAGTAGGGGAAGCAATCGCATGCTCATGTTTTGTCTGTTGGGCCAGAACAGACATCCATGGTATATAGTGCTCTTATTATTATGTATGCAAAATGTGGGAGCATCACAGAAGCTTCTAAAATTTTTATGGATTCATCAAAAGACGATGTCATTTTGTGGACAACAATGATCAGTGGGTATGCTGAACAATGGACATAGCCAAGAAGCCATTGAATTGTTTGAAAATATCCAAAAGGTTGGTTGGAGACCAGACTCAGTGACCTTCATTGGCGTTCTTACGCCTTGTAGTCATGCAGGAATGGTTGACCTTGGTTTCCACTACTTCAACTCAATGAGCCAAGATTATCACATCACTCCTTCAAAAGAACACTACGGATGTATGATTGATCTTCATCGAGCAGAGGATTAA

mRNA sequence

ATGGGGACTCCGGATGTCGTTTCGTGGATGACAATTGTAATGACATACGTTCAAATGGGTAAGGAGGAATGTCGGCTTCAAGCATTTAGAATAATCAATGTGATTCCAAATGAATATACATTTGCTGCTGTTATCTCTGGTTGTGCTAATCTTGCAAGGTTGACGTGGGGGGAACAACTACATGCTCATGTTTTATGTGTTGGGTTTCTGACTGTATTGTCAGTTGCTAACTCTATCATGACCATGTACACAAAATGTGGGGAGTTAGCTTCAGTTTCAAAGGTATTTTGTTCAATGAATTTTAGAGACATCATTACTTGGAGCACTATTATTGCAGCATATTCTCAAGTAGGCTATGGTGAAGAAGCTTTTGAGTATCTGTCACGGATGAGAAGTGGAGGACCCAAACCAAATGAGTTCGCCCTGCCTAGCGTGCTGAGTGTATGTGGAATGGGTATGCTGAACAATGGACATAGCCAAGAAGCCATTGAATTGTTTGAAAATATCCAAAAGGTTGGTTGGAGACCAGACTCAGTGACCTTCATTGGCGTTCTTACGCCTTGTAGTCATGCAGGAATGGTTGACCTTGGTTTCCACTACTTCAACTCAATGAGCCAAGATTATCACATCACTCCTTCAAAAGAACACTACGGATGTATGATTGATCTTCATCGAGCAGAGGATTAA

Coding sequence (CDS)

ATGGGGACTCCGGATGTCGTTTCGTGGATGACAATTGTAATGACATACGTTCAAATGGGTAAGGAGGAATGTCGGCTTCAAGCATTTAGAATAATCAATGTGATTCCAAATGAATATACATTTGCTGCTGTTATCTCTGGTTGTGCTAATCTTGCAAGGTTGACGTGGGGGGAACAACTACATGCTCATGTTTTATGTGTTGGGTTTCTGACTGTATTGTCAGTTGCTAACTCTATCATGACCATGTACACAAAATGTGGGGAGTTAGCTTCAGTTTCAAAGGTATTTTGTTCAATGAATTTTAGAGACATCATTACTTGGAGCACTATTATTGCAGCATATTCTCAAGTAGGCTATGGTGAAGAAGCTTTTGAGTATCTGTCACGGATGAGAAGTGGAGGACCCAAACCAAATGAGTTCGCCCTGCCTAGCGTGCTGAGTGTATGTGGAATGGGTATGCTGAACAATGGACATAGCCAAGAAGCCATTGAATTGTTTGAAAATATCCAAAAGGTTGGTTGGAGACCAGACTCAGTGACCTTCATTGGCGTTCTTACGCCTTGTAGTCATGCAGGAATGGTTGACCTTGGTTTCCACTACTTCAACTCAATGAGCCAAGATTATCACATCACTCCTTCAAAAGAACACTACGGATGTATGATTGATCTTCATCGAGCAGAGGATTAA

Protein sequence

MGTPDVVSWMTIVMTYVQMGKEECRLQAFRIINVIPNEYTFAAVISGCANLARLTWGEQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCGMGMLNNGHSQEAIELFENIQKVGWRPDSVTFIGVLTPCSHAGMVDLGFHYFNSMSQDYHITPSKEHYGCMIDLHRAED

Homology

[Close]

BLAST of CaUC01G019150 vs. NCBI nr
Match: XP_038887347.1 (putative pentatricopeptide repeat-containing protein At3g47840 [Benincasa hispida] >XP_038887348.1 putative pentatricopeptide repeat-containing protein At3g47840 [Benincasa hispida] >XP_038887349.1 putative pentatricopeptide repeat-containing protein At3g47840 [Benincasa hispida] >XP_038887350.1 putative pentatricopeptide repeat-containing protein At3g47840 [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 199/288 (69.10%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M TPDVVSW TIV TYVQMGKEEC LQAF+ +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 278 MRTPDVVSWTTIVATYVQMGKEECGLQAFKRMQESNVIPNEYTFAAVISGCANLARLKWG 337

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGF   LSVANSIMTMY+KCGELASVSKVFCSMNFRD+ITWSTIIAAYSQV
Sbjct: 338 EQLHAHVLRVGFRNALSVANSIMTMYSKCGELASVSKVFCSMNFRDVITWSTIIAAYSQV 397

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYGEEAFEYLSRMRS GPKPNEFAL SVLSVCG                           
Sbjct: 398 GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVC 457

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFENIQKVG R
Sbjct: 458 SALIIMYAKCGSIAEASKIFMDSLKDDVISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517

[Close]

BLAST of CaUC01G019150 vs. NCBI nr
Match: XP_023544313.1 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 5.0e-98
Identity = 195/288 (67.71%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW TIV TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 303 MRAPDVVSWTTIVTTYVQMGKEECGIQAFRRMKDSNVIPNEYTFAAVISGCANLARLKWG 362

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 363 EQLHAHVLRVGFLNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 422

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 423 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 482

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 483 SALIIMYAKCGSITEASKIFMDSLKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 542

[Close]

BLAST of CaUC01G019150 vs. NCBI nr
Match: XP_023544314.1 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 5.0e-98
Identity = 195/288 (67.71%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW TIV TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 278 MRAPDVVSWTTIVTTYVQMGKEECGIQAFRRMKDSNVIPNEYTFAAVISGCANLARLKWG 337

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 338 EQLHAHVLRVGFLNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 397

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 398 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 457

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 458 SALIIMYAKCGSITEASKIFMDSLKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 517

[Close]

BLAST of CaUC01G019150 vs. NCBI nr
Match: KAG7034130.1 (putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.9 bits (943), Expect = 6.5e-98
Identity = 194/288 (67.36%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 303 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRKMQDSNVIPNEYTFAAVISGCANLARLKWG 362

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 363 EQLHAHVLLVGFLNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 422

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 423 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 482

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 483 SALIIMYAKCGSITEASKIFMDSLKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 542

[Close]

BLAST of CaUC01G019150 vs. NCBI nr
Match: KAG6603961.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 6.5e-98
Identity = 194/288 (67.36%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 303 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRKMQDSNVIPNEYTFAAVISGCANLARLKWG 362

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 363 EQLHAHVLLVGFLNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 422

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 423 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 482

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 483 SALIIMYAKCGSITEASKIFMDSLKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 542

[Close]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot
Match: Q9STS9 (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E43 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-59
Identity = 125/288 (43.40%), Postives = 161/288 (55.90%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAF---RIINVIPNEYTFAAVISGCANLARLTWG 60
           M   DVVSW ++++ Y ++G+E   ++ F   R   V PNE TFA++ S CA+L+RL WG
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLH +VL +G    LSV+NS+M MY+ CG L S S +F  M  RDII+WSTII  Y Q 
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           G+GEE F+Y S MR  G KP +FAL S+LSV G                           
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +G S+EAI+LFE   KVG+R
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509

[Close]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.1e-37
Identity = 84/286 (29.37%), Postives = 135/286 (47.20%), Query Frame = 0


Query: 5   DVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWGEQLH 64
           DVVSW  ++  Y + G  +  L+ F+ +   NV P+E T   V+S CA    +  G Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 65  AHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQVGYGE 124
             +   GF + L + N+++ +Y+KCGEL +   +F  + ++D+I+W+T+I  Y+ +   +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349

Query: 125 EAFEYLSRMRSGGPKPNEFALPSVLSVCG------------------------------- 184
           EA      M   G  PN+  + S+L  C                                
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409

Query: 185 ---------------------------------MGMLNNGHSQEAIELFENIQKVGWRPD 224
                                             G   +G +  + +LF  ++K+G +PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469

[Close]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.8e-32
Identity = 82/286 (28.67%), Postives = 132/286 (46.15%), Query Frame = 0


Query: 5   DVVSWMTIVMTYVQMGKEECRLQAFRIINVI----PNEYTFAAVISGCANLARLTWGEQL 64
           +V  W T++  Y ++G        +R + V     P+ +T+  +I     +A +  GE +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 65  HAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQVGYG 124
           H+ V+  GF +++ V NS++ +Y  CG++AS  KVF  M  +D++ W+++I  +++ G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 125 EEAFEYLSRMRSGGPKPNEFALPSVLSVCG------------------------------ 184
           EEA    + M S G KP+ F + S+LS C                               
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 185 --------------------------------MGMLNNGHSQEAIELFENIQKV-GWRPD 224
                                           +G+  NG  +EAIELF+ ++   G  P 
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323

[Close]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-32
Identity = 80/232 (34.48%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M   +VVSW  ++  Y Q G+ E  L  F ++   +V P  Y+FA ++  CA+LA L  G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405

Query: 61  EQLHAHVLCVGFL------TVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTII 120
            Q H HVL  GF         + V NS++ MY KCG +     VF  M  RD ++W+ +I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465

Query: 121 AAYSQVGYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCGMGMLNNGHSQEAIELFENIQK 180
             ++Q GYG                                        EA+ELF  + +
Sbjct: 466 IGFAQNGYG---------------------------------------NEALELFREMLE 525

Query: 181 VGWRPDSVTFIGVLTPCSHAGMVDLGFHYFNSMSQDYHITPSKEHYGCMIDL 224
            G +PD +T IGVL+ C HAG V+ G HYF+SM++D+ + P ++HY CM+DL
Sbjct: 526 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538

[Close]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 77/226 (34.07%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M T D + W +I+  + Q  + +  L+ F+ +     I  + T  +V+  C  LA L  G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
            Q H H+  V +   L + N+++ MY KCG L    +VF  M  RD+ITWST+I+     
Sbjct: 280 MQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS----- 339

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCGMGMLNNGHSQEAIELFENIQKVGWRPD 180
                                             G+  NG+SQEA++LFE ++  G +P+
Sbjct: 340 ----------------------------------GLAQNGYSQEALKLFERMKSSGTKPN 399

Query: 181 SVTFIGVLTPCSHAGMVDLGFHYFNSMSQDYHITPSKEHYGCMIDL 224
            +T +GVL  CSHAG+++ G++YF SM + Y I P +EHYGCMIDL
Sbjct: 400 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404

[Close]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL
Match: A0A6J1GEH8 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453211 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 193/288 (67.01%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 303 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRRMKDSNVIPNEYTFAAVISGCANLARLKWG 362

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGF+  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 363 EQLHAHVLRVGFVNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 422

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 423 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 482

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 483 SALIIMYAKCGSITEASKIFTDSLKNDIISWTAMISGHAEHGHSQEAIELFESIQKVGLR 542

[Close]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL
Match: A0A6J1GEB4 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453211 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 193/288 (67.01%), Postives = 205/288 (71.18%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 278 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRRMKDSNVIPNEYTFAAVISGCANLARLKWG 337

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGF+  LSVANSIMTMY+KCGELASVSKVFCSMNF+D+ITWSTIIAAYSQV
Sbjct: 338 EQLHAHVLRVGFVNALSVANSIMTMYSKCGELASVSKVFCSMNFKDVITWSTIIAAYSQV 397

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS GPKPNEFAL SVLSVCG                           
Sbjct: 398 GYGKEAFEYLSQMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 457

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 458 SALIIMYAKCGSITEASKIFTDSLKNDIISWTAMISGHAEHGHSQEAIELFESIQKVGLR 517

[Close]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL
Match: A0A6J1IMM7 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478417 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 191/288 (66.32%), Postives = 203/288 (70.49%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 278 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRRMQDSNVIPNEYTFAAVISGCANLARLKWG 337

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSK+FCSMNF+D+ITWSTIIAAYSQV
Sbjct: 338 EQLHAHVLRVGFLNALSVANSIMTMYSKCGELASVSKLFCSMNFKDVITWSTIIAAYSQV 397

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS G KPNEFAL SVLSVCG                           
Sbjct: 398 GYGKEAFEYLSQMRSEGSKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 457

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 458 SALIIMYAKCGSITEASKIFMDSVKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 517

[Close]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL
Match: A0A6J1IU19 (putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478417 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 191/288 (66.32%), Postives = 203/288 (70.49%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M  PDVVSW T+V TYVQMGKEEC +QAFR +   NVIPNEYTFAAVISGCANLARL WG
Sbjct: 303 MRAPDVVSWTTMVTTYVQMGKEECGIQAFRRMQDSNVIPNEYTFAAVISGCANLARLKWG 362

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVL VGFL  LSVANSIMTMY+KCGELASVSK+FCSMNF+D+ITWSTIIAAYSQV
Sbjct: 363 EQLHAHVLRVGFLNALSVANSIMTMYSKCGELASVSKLFCSMNFKDVITWSTIIAAYSQV 422

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYG+EAFEYLS+MRS G KPNEFAL SVLSVCG                           
Sbjct: 423 GYGKEAFEYLSQMRSEGSKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTAMVC 482

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFE+IQKVG R
Sbjct: 483 SALIIMYAKCGSITEASKIFMDSVKDDIISWTAMISGYAEHGHSQEAIELFESIQKVGLR 542

[Close]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL
Match: A0A0A0KXW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G335250 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 192/288 (66.67%), Postives = 201/288 (69.79%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAF---RIINVIPNEYTFAAVISGCANLARLTWG 60
           M T DVVSW TIV  Y+QMGKE+C LQAF   R  NVIPNEYTF+AVIS CAN ARL WG
Sbjct: 278 MRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWG 337

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLHAHVLCVGF+  LSVANSIMT+Y+KCGELASVSKVFCSM FRDIITWSTIIAAYSQV
Sbjct: 338 EQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQV 397

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           GYGEEAFEYLSRMRS GPKPNEFAL SVLSVCG                           
Sbjct: 398 GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVC 457

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +GHSQEAIELFENIQKVG R
Sbjct: 458 SALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517

[Close]

BLAST of CaUC01G019150 vs. TAIR 10
Match: AT3G47840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 231.1 bits (588), Expect = 8.9e-61
Identity = 125/288 (43.40%), Postives = 161/288 (55.90%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAF---RIINVIPNEYTFAAVISGCANLARLTWG 60
           M   DVVSW ++++ Y ++G+E   ++ F   R   V PNE TFA++ S CA+L+RL WG
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
           EQLH +VL +G    LSV+NS+M MY+ CG L S S +F  M  RDII+WSTII  Y Q 
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCG--------------------------- 180
           G+GEE F+Y S MR  G KP +FAL S+LSV G                           
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449

Query: 181 -----------------------------------MGMLNNGHSQEAIELFENIQKVGWR 224
                                               G   +G S+EAI+LFE   KVG+R
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509

[Close]

BLAST of CaUC01G019150 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-38
Identity = 84/286 (29.37%), Postives = 135/286 (47.20%), Query Frame = 0


Query: 5   DVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWGEQLH 64
           DVVSW  ++  Y + G  +  L+ F+ +   NV P+E T   V+S CA    +  G Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 65  AHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQVGYGE 124
             +   GF + L + N+++ +Y+KCGEL +   +F  + ++D+I+W+T+I  Y+ +   +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349

Query: 125 EAFEYLSRMRSGGPKPNEFALPSVLSVCG------------------------------- 184
           EA      M   G  PN+  + S+L  C                                
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409

Query: 185 ---------------------------------MGMLNNGHSQEAIELFENIQKVGWRPD 224
                                             G   +G +  + +LF  ++K+G +PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469

[Close]

BLAST of CaUC01G019150 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-33
Identity = 82/286 (28.67%), Postives = 132/286 (46.15%), Query Frame = 0


Query: 5   DVVSWMTIVMTYVQMGKEECRLQAFRIINVI----PNEYTFAAVISGCANLARLTWGEQL 64
           +V  W T++  Y ++G        +R + V     P+ +T+  +I     +A +  GE +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 65  HAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQVGYG 124
           H+ V+  GF +++ V NS++ +Y  CG++AS  KVF  M  +D++ W+++I  +++ G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 125 EEAFEYLSRMRSGGPKPNEFALPSVLSVCG------------------------------ 184
           EEA    + M S G KP+ F + S+LS C                               
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 185 --------------------------------MGMLNNGHSQEAIELFENIQKV-GWRPD 224
                                           +G+  NG  +EAIELF+ ++   G  P 
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323

[Close]

BLAST of CaUC01G019150 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 80/232 (34.48%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M   +VVSW  ++  Y Q G+ E  L  F ++   +V P  Y+FA ++  CA+LA L  G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405

Query: 61  EQLHAHVLCVGFL------TVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTII 120
            Q H HVL  GF         + V NS++ MY KCG +     VF  M  RD ++W+ +I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465

Query: 121 AAYSQVGYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCGMGMLNNGHSQEAIELFENIQK 180
             ++Q GYG                                        EA+ELF  + +
Sbjct: 466 IGFAQNGYG---------------------------------------NEALELFREMLE 525

Query: 181 VGWRPDSVTFIGVLTPCSHAGMVDLGFHYFNSMSQDYHITPSKEHYGCMIDL 224
            G +PD +T IGVL+ C HAG V+ G HYF+SM++D+ + P ++HY CM+DL
Sbjct: 526 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538

[Close]

BLAST of CaUC01G019150 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 77/226 (34.07%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 1   MGTPDVVSWMTIVMTYVQMGKEECRLQAFRII---NVIPNEYTFAAVISGCANLARLTWG 60
           M T D + W +I+  + Q  + +  L+ F+ +     I  + T  +V+  C  LA L  G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279

Query: 61  EQLHAHVLCVGFLTVLSVANSIMTMYTKCGELASVSKVFCSMNFRDIITWSTIIAAYSQV 120
            Q H H+  V +   L + N+++ MY KCG L    +VF  M  RD+ITWST+I+     
Sbjct: 280 MQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS----- 339

Query: 121 GYGEEAFEYLSRMRSGGPKPNEFALPSVLSVCGMGMLNNGHSQEAIELFENIQKVGWRPD 180
                                             G+  NG+SQEA++LFE ++  G +P+
Sbjct: 340 ----------------------------------GLAQNGYSQEALKLFERMKSSGTKPN 399

Query: 181 SVTFIGVLTPCSHAGMVDLGFHYFNSMSQDYHITPSKEHYGCMIDL 224
            +T +GVL  CSHAG+++ G++YF SM + Y I P +EHYGCMIDL
Sbjct: 400 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404

The following BLAST results are available for this feature:

BLAST of CaUC01G019150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887347.1	1.2e-99	69.10	putative pentatricopeptide repeat-containing protein At3g47840 [Benincasa hispid...	[more]
XP_023544313.1	5.0e-98	67.71	putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 [Cucur...	[more]
XP_023544314.1	5.0e-98	67.71	putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 [Cucur...	[more]
KAG7034130.1	6.5e-98	67.36	putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma sub...	[more]
KAG6603961.1	6.5e-98	67.36	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]

BLAST of CaUC01G019150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STS9	1.3e-59	43.40	Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis th...	[more]
Q9LN01	5.1e-37	29.37	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
A8MQA3	3.8e-32	28.67	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	5.0e-32	34.48	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SI53	2.5e-31	34.07	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of CaUC01G019150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEH8	1.6e-97	67.01	putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 OS=Cuc...	[more]
A0A6J1GEB4	1.6e-97	67.01	putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 OS=Cuc...	[more]
A0A6J1IMM7	3.0e-96	66.32	putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 OS=Cuc...	[more]
A0A6J1IU19	3.0e-96	66.32	putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 OS=Cuc...	[more]
A0A0A0KXW2	3.0e-96	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G335250 PE=4 SV=1	[more]

BLAST of CaUC01G019150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47840.1	8.9e-61	43.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	3.6e-38	29.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	2.7e-33	28.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	3.5e-33	34.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	1.7e-32	34.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 153..226 e-value: 4.1E-11 score: 44.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 26..152 e-value: 6.9E-21 score: 76.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 105..139 e-value: 5.4E-6 score: 24.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 77..100 e-value: 0.91 score: 9.9 coord: 105..134 e-value: 3.5E-6 score: 26.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 103..137 score: 11.224429
None	No IPR available	PANTHER	PTHR24015:SF1799	OS05G0581300 PROTEIN	coord: 152..223 coord: 1..150
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 152..223 coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G019150.1	CaUC01G019150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding