CaUC01G018040 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G018040
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr01: 31464227 .. 31464788 (-)
RNA-Seq Expression	CaUC01G018040
Synteny	CaUC01G018040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGTGAGGAAAATGATTTGAGTATCAACCCTGATAGATGTGTATATATAATATATATATGTCACGCAGGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAGTTATTAGAACTTGAACTACATGTACAGATAATGACGCCAATAATACAAGGTGTATAATAAGTAGGCCAATTCGAATACTTGACGGAACAGACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAATGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

mRNA sequence

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAATGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

Coding sequence (CDS)

ATGAGCAAAGCCCTTCCTAGTAGTATGGCATGTATCGCATGGGCCTTCGGAAACGGGGCGTTTTCCTGTAGCAGGATGAAACTTACCCATATCCTCCATATGGTGAGTAAAAATAAGGGGCCATGTAAGGCCTCCTGGATCGATAACCCATGTAAGGATTGTAACGCTGAGGAAAATACTGCTTCATCCCAGGAATATTTGTTCGCTTTTGTTGAACCTGAGATGAATAGGATGATATTAAAACCATTTGTCAGAAACGCATGGATCATCCTTTTCTCCAAGGAACTACCTTCAATTGTCTTCCATGCAACTCTGACTCATTTAAATGGAGTGCCTCCTGAACAGCTTCGGCTTCAACAAACTCCACATAAGCGAAGCCCTTGGGATGACCAAATTTATCCGTAA

Protein sequence

MSKALPSSMACIAWAFGNGAFSCSRMKLTHILHMVSKNKGPCKASWIDNPCKDCNAEENTASSQEYLFAFVEPEMNRMILKPFVRNAWIILFSKELPSIVFHATLTHLNGVPPEQLRLQQTPHKRSPWDDQIYP

Homology

The following BLAST results are available for this feature:

BLAST of CaUC01G018040 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G018040 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G018040 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G018040 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..134
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G018040.1	CaUC01G018040.1	mRNA