CaUC01G017900 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G017900
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionvegetative cell wall protein gp1-like
LocationCiama_Chr01: 31326215 .. 31326715 (+)
RNA-Seq ExpressionCaUC01G017900
SyntenyCaUC01G017900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCGAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCGCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

mRNA sequence

ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCGAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCGCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

Coding sequence (CDS)

ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCGAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCGCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

Protein sequence

MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAPSPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA
Homology
BLAST of CaUC01G017900 vs. NCBI nr
Match: XP_038881138.1 (vegetative cell wall protein gp1-like [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 6.5e-55
Identity = 150/166 (90.36%), Postives = 151/166 (90.96%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVR+VVIFALLTRLCMAQAPAPAPGSSQPL P P TPAPSPV  PPSPTPTPNRAP
Sbjct: 1   MGFSGVRYVVIFALLTRLCMAQAPAPAPGSSQPLPPLPTTPAPSPVVFPPSPTPTPNRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPS 120
           S SPAPASPSPAP APSPAPA PAPAPATTAPTPAPSSS TPS    GGPVVPPIASPPS
Sbjct: 61  SLSPAPASPSPAPEAPSPAPAVPAPAPATTAPTPAPSSSLTPS----GGPVVPPIASPPS 120

Query: 121 PTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           PTGIEVPS APQAPAADNPAGAASHIGGAA FGIAVAGTLFAVILA
Sbjct: 121 PTGIEVPSSAPQAPAADNPAGAASHIGGAA-FGIAVAGTLFAVILA 161

BLAST of CaUC01G017900 vs. NCBI nr
Match: KAA0036330.1 (hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK12724.1 hypothetical protein E5676_scaffold255G003120 [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 143/166 (86.14%), Postives = 146/166 (87.95%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVRFVVIFALLTRLCMAQAP PAPGS QPLTPP ATPAPSPV LPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPS 120
           SPSP P SPSPAP APSPAP  PAPAPA  APTP P S+PTPS    GGPVVPPIASPPS
Sbjct: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPS----GGPVVPPIASPPS 120

Query: 121 PTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           PTGIEVPSPAPQ P ADNPAGAASHIGGAAT GIA+AGTLFAVIL+
Sbjct: 121 PTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 162

BLAST of CaUC01G017900 vs. NCBI nr
Match: XP_022978568.1 (vegetative cell wall protein gp1-like [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-38
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVR VVIFAL+  LC AQAPAPA  S +P+ P PATPAPSPVA PPSP+ +P RAP
Sbjct: 1   MGFSGVRLVVIFALMA-LCTAQAPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPA---------APAPAPATTAPTPAPSSSPTPSGSPTGGPV 120
           SPSP  ASPSPA  APSPAP+         AP P+PAT+APTPAPSS P PSGSP G PV
Sbjct: 61  SPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGAPV 120

Query: 121 VPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           VPPIASPPSP+  + PSP P+APAAD+PAGAASHIGGA T GIA+AGTL A+++A
Sbjct: 121 VPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 173

BLAST of CaUC01G017900 vs. NCBI nr
Match: XP_023544207.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-38
Identity = 123/179 (68.72%), Postives = 139/179 (77.65%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPG----SSQPLTPPPATPAPSPVALPPSPTPTP 60
           MGFSGVR VVIFAL+  LCMAQAPAP P     S +P+ P PATPAPSPVA PP+P+ +P
Sbjct: 1   MGFSGVRLVVIFALMA-LCMAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPAPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPGAPSPAPA---------APAPAPATTAPTPAPSSSPTPSGSPT 120
            RAPSPSP  ASPSPA  APSPAP+         AP P+PAT+APTPAPSS P PSGSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           G PVVPPIASPPSP+  E PSP P+APAAD+PAGAASHIGGA T GIA+AGTL A+++A
Sbjct: 121 GAPVVPPIASPPSPS-TEGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

BLAST of CaUC01G017900 vs. NCBI nr
Match: XP_022950235.1 (vegetative cell wall protein gp1-like [Cucurbita moschata])

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-36
Identity = 121/179 (67.60%), Postives = 137/179 (76.54%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPG----SSQPLTPPPATPAPSPVALPPSPTPTP 60
           MG SGVR VVIFAL+  LC AQAPAP P     S +P+ P PATPAPSPVA PPSP+ +P
Sbjct: 1   MGSSGVRLVVIFALMA-LCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPGAPSPAPA---------APAPAPATTAPTPAPSSSPTPSGSPT 120
            RAPSPSP  ASPSPA  APSPAP+         AP P+PAT+APTPAPSS P PSGSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           G PVVPPIASPPSP+  + PSP P+APAAD+PAGAASHIGGA T GIA+AGTL A+++A
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

BLAST of CaUC01G017900 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-04
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0

Query: 24  PAPAPGS-SQPLTPPPATPAPSPVALPPSPTP--TPNRAPSPSPAPASPSPAPGAPSPAP 83
           P+P+P S + PL P PA P+PSP  +PPSP+P   P+ AP PSP P SPSP P  PSPAP
Sbjct: 135 PSPSPPSPAPPLPPSPAPPSPSP-PVPPSPSPPVPPSPAP-PSPTPPSPSP-PVPPSPAP 194

Query: 84  AAPA----PAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPSPTGIEVPSPAPQAPAA 141
            +PA    P+PA  +P P    SP P   P+  P  PP  +PPSP+    PSP P +PA 
Sbjct: 195 PSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAP 254

BLAST of CaUC01G017900 vs. ExPASy Swiss-Prot
Match: O10341 (Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=ORF92 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 65/147 (44.22%), Postives = 82/147 (55.78%), Query Frame = 0

Query: 24  PAPAPGSSQPLTPPPA---TPAPSPVALP-PSPTPTPNRAPSPSPAPA-SPSPAPG---A 83
           P P P  +   TP PA   TP PSP   P PSPTPTP+  PSP+P+P  +PSP P     
Sbjct: 61  PTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPT 120

Query: 84  PSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASP---PSPTGIEVPSPAPQ 143
           PSP P +P P P+ T PTP+P+ SPTPS +PT  P   P  +P   PSPT    P+P+P 
Sbjct: 121 PSPTP-SPTPTPSPT-PTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPT 180

Query: 144 APAADNPAGAASHIGGAATFGIAVAGT 160
            P +  P  + S +G    F  +V  T
Sbjct: 181 PPPSPTPPPSPSPLGDPMYFPSSVGTT 205

BLAST of CaUC01G017900 vs. ExPASy TrEMBL
Match: A0A5D3CNQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003120 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.4e-55
Identity = 143/166 (86.14%), Postives = 146/166 (87.95%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVRFVVIFALLTRLCMAQAP PAPGS QPLTPP ATPAPSPV LPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPS 120
           SPSP P SPSPAP APSPAP  PAPAPA  APTP P S+PTPS    GGPVVPPIASPPS
Sbjct: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPS----GGPVVPPIASPPS 120

Query: 121 PTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           PTGIEVPSPAPQ P ADNPAGAASHIGGAAT GIA+AGTLFAVIL+
Sbjct: 121 PTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 162

BLAST of CaUC01G017900 vs. ExPASy TrEMBL
Match: A0A0A0KG74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 134/166 (80.72%), Postives = 140/166 (84.34%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVRFV+IFALLTRLCMAQAPAPAPGS QPLTPP ATPAPSPV LPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVLIFALLTRLCMAQAPAPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPS 120
           SPSP P SPSPAP A S       PAPA  APTP P S+PTPS    GGPV+PPIASPPS
Sbjct: 61  SPSPTPVSPSPAPDAAS-------PAPAPIAPTPTPISTPTPS----GGPVLPPIASPPS 120

Query: 121 PTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           PTG+EVPSPAPQ PAADNPAGA SHIGGAAT GIA+AGTLF VIL+
Sbjct: 121 PTGMEVPSPAPQGPAADNPAGAGSHIGGAATLGIALAGTLFGVILS 155

BLAST of CaUC01G017900 vs. ExPASy TrEMBL
Match: A0A6J1ITI1 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111478507 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVR VVIFAL+  LC AQAPAPA  S +P+ P PATPAPSPVA PPSP+ +P RAP
Sbjct: 1   MGFSGVRLVVIFALMA-LCTAQAPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIRAP 60

Query: 61  SPSPAPASPSPAPGAPSPAPA---------APAPAPATTAPTPAPSSSPTPSGSPTGGPV 120
           SPSP  ASPSPA  APSPAP+         AP P+PAT+APTPAPSS P PSGSP G PV
Sbjct: 61  SPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGAPV 120

Query: 121 VPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           VPPIASPPSP+  + PSP P+APAAD+PAGAASHIGGA T GIA+AGTL A+++A
Sbjct: 121 VPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 173

BLAST of CaUC01G017900 vs. ExPASy TrEMBL
Match: A0A6J1GF55 (vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453383 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 121/179 (67.60%), Postives = 137/179 (76.54%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPG----SSQPLTPPPATPAPSPVALPPSPTPTP 60
           MG SGVR VVIFAL+  LC AQAPAP P     S +P+ P PATPAPSPVA PPSP+ +P
Sbjct: 1   MGSSGVRLVVIFALMA-LCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPGAPSPAPA---------APAPAPATTAPTPAPSSSPTPSGSPT 120
            RAPSPSP  ASPSPA  APSPAP+         AP P+PAT+APTPAPSS P PSGSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
           G PVVPPIASPPSP+  + PSP P+APAAD+PAGAASHIGGA T GIA+AGTL A+++A
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

BLAST of CaUC01G017900 vs. ExPASy TrEMBL
Match: A0A6J1KP28 (classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497414 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17
Identity = 88/166 (53.01%), Postives = 101/166 (60.84%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAP 60
           MGFSGVRF+++ ALL   CMAQAPAP              PAP+P   P  P P      
Sbjct: 1   MGFSGVRFIMVLALLAATCMAQAPAP-------------VPAPAPTQGPSQPLP------ 60

Query: 61  SPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPS 120
              PAPA+P     APS +PA+P PAP T+ PTPAP    TPSGSP GGPVVP +ASP  
Sbjct: 61  ---PAPATP-----APSSSPASPTPAPETSTPTPAPI---TPSGSPAGGPVVPRVASP-- 120

Query: 121 PTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA 167
                 PS AP+ P ADNP GAAS IG A T G+AVAG+L AV+LA
Sbjct: 121 ------PSSAPEGPPADNPTGAASQIGRAGTLGMAVAGSLLAVMLA 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038881138.16.5e-5590.36vegetative cell wall protein gp1-like [Benincasa hispida][more]
KAA0036330.11.1e-5486.14hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK1272... [more]
XP_022978568.13.2e-3869.71vegetative cell wall protein gp1-like [Cucurbita maxima][more]
XP_023544207.17.2e-3868.72vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo][more]
XP_022950235.12.3e-3667.60vegetative cell wall protein gp1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9FPQ67.1e-0449.19Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=... [more]
O103419.3e-0444.22Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosi... [more]
Match NameE-valueIdentityDescription
A0A5D3CNQ65.4e-5586.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KG741.5e-4980.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1[more]
A0A6J1ITI11.6e-3869.71vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11147850... [more]
A0A6J1GF551.1e-3667.60vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453... [more]
A0A6J1KP281.2e-1753.01classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 39..55
score: 47.06
coord: 17..38
score: 27.27
coord: 56..73
score: 30.0
coord: 76..101
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..134
NoneNo IPR availablePANTHERPTHR36321:SF6CLASSICAL ARABINOGALACTAN PROTEIN 2coord: 78..166
coord: 1..88
IPR044959Classical arabinogalactan proteinPANTHERPTHR36321CLASSICAL ARABINOGALACTAN PROTEIN 9coord: 78..166
coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G017900.1CaUC01G017900.1mRNA